Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00066 LG1 1807889 1808483 receptor-like protein kinase FERONIA
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of cell growth, response to ethylene, pollen tube reception, negative regulation of cell growth, stomatal movement, defense response to fungus, pollen tube reception, negative regulation of abscisic acid-activated signaling pathway, protein autophosphorylation, post-embryonic development, protein autophosphorylation, negative regulation of cell growth, pollen tube reception, protein phosphorylation, protein phosphorylation, protein autophosphorylation, response to brassinosteroid, defense response to fungus, response to ethylene, defense response to fungus, root development, pollen tube reception, circadian regulation of gene expression, protein phosphorylation, negative regulation of abscisic acid-activated signaling pathway, negative regulation of abscisic acid-activated signaling pathway, circadian regulation of gene expression, protein autophosphorylation, negative regulation of abscisic acid-activated signaling pathway, negative regulation of abscisic acid-activated signaling pathway, negative regulation of cell growth, protein autophosphorylation, root development, response to brassinosteroid, protein autophosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasmodesma, plasma membrane, plasma membrane, plasma membrane, extracellular region, plasma membrane, filiform apparatus, filiform apparatus, plasma membrane
Molecular Function   enables   protein binding, protein binding, protein serine/threonine kinase activity, kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein kinase activity, protein kinase activity, protein binding, protein binding, protein kinase activity, protein kinase activity, protein kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein binding, transmembrane receptor protein tyrosine kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein binding, transmembrane receptor protein tyrosine kinase activity
SNP Position Effect Amino acid change
C/A 1808007 intron_variant
G/A 1808050 splice_region_variant&intron_variant
C/A 1808060 synonymous_variant p.Leu20Leu
C/T 1808093 synonymous_variant p.Asn31Asn
T/C 1808221 missense_variant p.Leu74Ser
G/T 1808272 missense_variant p.Ser91Ile
G/T 1808294 missense_variant p.Lys98Asn
G/A 1808323 missense_variant p.Arg108His
C/A 1808405 synonymous_variant p.Leu135Leu
G/A 1808438 synonymous_variant p.Leu146Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00066.1
MTKFYKALPSFIELGQDKRLSFVEIKTTTNNFDDAIVVGVRGFFHMYRGIIRKIFMLVALKHFRSSSNGPKNFLNKMDKAINFQKSGSKQSIEEFLNKMELLSQLCHRNLIPLIGYCNSNEEFVLVFSFMARDNLYDHLYNNDKPLFPWKRRLLICIEAA*


CDS Sequence:
>Vu_00066.1
ATGACTAAGTTTTACAAAGCTCTACCAAGTTTTATTGAGCTCGGCCAGGATAAACGCCTCTCCTTCGTCGAGATCAAAACTACCACCAACAACTTTGATGATGCTATCGTTGTTGGTGTTAGGGGGTTTTTCCACATGTACAGGGGCATCATCCGCAAAATTTTCATGTTAGTGGCTCTTAAGCATTTTAGATCAAGTTCCAATGGCCCTAAAAACTTCTTGAACAAGATGGATAAGGCCATCAATTTCCAAAAATCAGGTTCAAAGCAGAGCATTGAAGAGTTTCTGAACAAGATGGAGTTGCTCTCGCAGCTTTGCCATCGCAATCTTATTCCACTCATCGGTTACTGCAATAGCAATGAGGAGTTTGTCCTAGTCTTTAGTTTCATGGCACGTGACAACCTCTACGACCATCTCTACAACAACGACAAACCTCTGTTTCCATGGAAGCGACGTTTGTTGATTTGTATCGAAGCAGCGTAG


Promoter Sequence:
>Vu_00066::LG1:1805889-1807889(+)
CCAACTTCTAACACTCTTAGATTGTATTATATACCTAATTAGACTTGTCTAAGTGATTCTAAACCTTACTAACACCAATCTAAAGTGATTATGAACCAAATCTTATTCTAGGACATCAAATTTCTCGACTTAAAGACCCAAATTCAATTCTACCACTTTGCACATGTTTTTTACCATTTAAATGACTCAAACAAGTCACAAATAACTTACCTAAACTGCCCCAACAGACCAAATGAGCCCTTGACCTTTAATTCTCAAATTCACTACCTCACTTCCTCTAAATTGCCCAAAAACACTATAATTCACTTGACCTCATACCTAATAACTATCATAACATATTTCACATCTCCAAAAAACTCAATTACAACAATACATCTCATCCAAAACAATTTAAAAACACCAATTCACAGTTTCACATTTAAACATTTCAATACATACAATTCAATCCACTCTAAAAACCCAAATTGTGCTTCAAACAGCAGAATAACACATAATTCAACATATACACATGTTATACAAATAATTTAAAAACAATATCTAGCTCCCCTTACCTTGAATAAGATTCTAGACAACTCTACCGAACGCCGATCATTTGCTTGCACCACAAGGAATTTCTAGAAACGCCTACAAATCACCAATCAGTGATAGAGAACAGCTCTTAGAACCTAAATTGAGCTGAGAATTGAAGAAGAAAACTACAAGACACATGCAACAGCAATGTTTGCATGATCAAGACTCAAGAACATGTGGAGAAAGGGGAAAAACAACTTACCAGCTAGAATCAAGAAATTGATTGGTCAGTTGTGTAGCCCTCTATGCCGTGAATGTCTAGGCACCTCCTGATCGTCAATCCGACAACTCAGTTGAGAGAATCCTAAAGAGAAGGAAGAGAAAGAGTAGAGAATAGTGTCTTAGAGAGATGAAGTGTTTTAGATAATGAACCGAGCTTTAAAAGTTCTATTTATAATATAAGATTATTTTTAAAGTAAAATGCTCGTCTCATTATTTTAATACACCTATCTACTCTATTACTTTATTTTCTAGGTTCTTACAGATTATGTTAAAAAGTATATGTAGAAAAATATATTCATATTCAAATTGCAAACCAAAATCGATAAAATCATTAAATAATTATAGTATAAATTTGTTCAAGATAATTTCTCTAGCATTTGTTAATAGTTCCTACTTTGTAGCCTTTAATTACTTATGTATGCCTTTATTTTCATATGAGCAGTTTGATCTCAATTTCTATTTAAACTAATTGAATAAAATATCACAGTAGTTTTTTTTGTGTTGCATTACAAATATTCCCTATTATTTCAATTTGGTTCCAAGAGCATACTTTTGGCTAAATCTCTCCATTTAAAAGTATGACTACTTCTCCAAGAACCTCAAGTTCATGTGAGCAATATGCCTTATCTTCTTTTTCAAATAAAAAATTTACTCACTCAATATAATAAATTAAACTTGATCATACTAATACACAACATTATGAGTACTAATATAGCATCTCAATTGATGTGGAAATCAATATTGAAAGAATTGTGGGATGTAGCAAAAGAAATTTCAGGTGCGATCAAAGTTTGTCTACTACAAAGCTAAGTTATAGAAAACAAGACAAAGGAGGAACAAAGATGGATGAATATTTGAAAATTATGAAGTCTATTGTTGATAACCTACACTAGCAAGTAACTCAATTTCTCAATTTGAACTAATTGTTTTTTTATAGATATAAGCAAATTTCAAACATAAATTACGAAAATAGACAAATTTGAAAAAAAAATTACAAAAATAAACAAGTTGTTACGAAAATAGGCAAATGAAGAAGTTGTTTGCCCTCTGTACAACCTCCACTCTAACACCATAGAAAAGTAGAAGTCCCTCCCACCCCTGATGACTTCAATATAGAAGTTGACCACACCCGTCATGACTTCAATAATGAGGTCGACAAATTCAGACTGAAATGATGAGCTCGGCTAGTCTAAGCTGAAACGATGAAA


Gene Sequence:
>Vu_00066(+)
ATGACTAAGTTTTACAAAGCTCTACCAAGTTTTATTGAGCTCGGCCAGGATAAAGTTAAGCTCGAAGAGACTCTACAAATCTCTTCCTAACAATGTTAAACTCGACAATGTACACCAACTATCAACCATTGCACATGAATGATTAACCAACACGTTCATCTGGCAGCGCCTCTCCTTCGTCGAGATCAAAACTACCACCAACAACTTTGATGATGCTATCGTTGTTGGTGTTAGGGGGTTTTTCCACATGTACAGGGGCATCATCCGCAAAATTTTCATGTTAGTGGCTCTTAAGCATTTTAGATCAAGTTCCAATGGCCCTAAAAACTTCTTGAACAAGATGGATAAGGCCATCAATTTCCAAAAATCAGGTTCAAAGCAGAGCATTGAAGAGTTTCTGAACAAGATGGAGTTGCTCTCGCAGCTTTGCCATCGCAATCTTATTCCACTCATCGGTTACTGCAATAGCAATGAGGAGTTTGTCCTAGTCTTTAGTTTCATGGCACGTGACAACCTCTACGACCATCTCTACAACAACGACAAACCTCTGTTTCCATGGAAGCGACGTTTGTTGATTTGTATCGAAGCAGCGTAG