Simple Sequence Repeats:
Ricebean genome spanning 592 Mb contain 72,193 sequence repeats of which, 63,248 (87.61%) and 8,945 (12.39%) were simple and compound repeats, respectively. Of the 63,248 simple repeats, primer pairs for 41,977 SSRs (66.37%) could be successfully designed. All the SSRs, for which primer pairs were designed, were anchored to individual chromosomes according to their coordinates. The user can query the database from `SSRs` tab using motif sequence, chromosome number, two coordinates of a chromosome or combination of repeat length and minimum number of repeat.