Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00088 LG1 2360977 2363652 PREDICTED: transcription factor DIVARICATA-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 2361318 5_prime_UTR_variant
T/A 2361338 5_prime_UTR_variant
G/A 2361544 5_prime_UTR_variant
C/A 2362270 synonymous_variant p.Pro99Pro
T/C 2362271 missense_variant p.Phe100Leu
G/T 2362322 stop_gained p.Gly117*
T/G 2362351 missense_variant p.His126Gln
A/G 2362364 missense_variant p.Lys131Glu
G/T 2362380 missense_variant p.Trp136Leu
A/T 2362421 intron_variant
A/T 2362434 intron_variant
G/C 2362659 intron_variant
C/G 2363064 missense_variant p.Thr252Arg
G/T 2363394 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00088.1
MKWETVALSPTPCSPNSNTNWLLENNRSTKWTPEENKLFENALAVHDKDTPDRWHKVAEMIPGKTVLDVIKQYKELEIDVSNIEAGLIPVPGYSTATSPFTLDWVNSPGYDGFKGSGKRSSSARPHEQERKKGVPWTEDEHKLFLLGLKKYGKGDWRNISRNFVISRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETSTTSSEDTNRSTSPHVLSQQQQQQQQPNSTPTTPTTHFQWSNQSSTGIAMTFNPAHERVFMSPYGANSFGVKMEAQNLHNESSYLGPQTQNIVFQMQQSSQH*


CDS Sequence:
>Vu_00088.1
ATGAAGTGGGAAACTGTAGCCCTTTCTCCTACACCTTGTTCTCCAAACTCCAACACCAATTGGTTGCTGGAAAATAACAGGAGCACAAAATGGACTCCTGAAGAGAACAAACTCTTTGAAAATGCTCTTGCAGTGCATGATAAAGATACTCCAGATCGGTGGCACAAAGTGGCTGAAATGATTCCTGGAAAGACAGTACTTGATGTGATCAAGCAGTACAAAGAACTTGAAATTGATGTTAGCAATATAGAAGCTGGGTTAATCCCTGTTCCTGGTTATAGCACTGCTACTTCACCCTTCACCTTAGATTGGGTGAACAGTCCTGGTTATGATGGGTTCAAAGGAAGTGGAAAGAGATCATCCTCAGCGAGACCTCATGAGCAGGAAAGGAAGAAAGGAGTGCCTTGGACTGAAGATGAACATAAATTGTTTTTACTGGGTCTGAAGAAATATGGGAAAGGTGATTGGAGAAATATTTCTCGCAATTTTGTGATCTCTAGAACCCCAACACAAGTGGCTAGCCATGCTCAGAAGTACTTCATAAGGCAACTTTCAGGAGGCAAAGACAAGAGAAGGGCCAGCATACATGACATAACAACAGTGAATCTGACAGAAACATCCACAACTTCTTCAGAAGACACCAACAGATCCACCTCACCACATGTGCTCTCACAGCAGCAGCAGCAGCAGCAGCAGCCAAATTCTACTCCAACTACACCCACAACTCATTTTCAGTGGAGTAATCAGTCAAGCACAGGAATAGCTATGACTTTCAACCCTGCTCATGAAAGAGTCTTCATGTCTCCTTATGGTGCTAACTCCTTTGGGGTTAAAATGGAAGCACAGAATCTGCATAACGAGTCTTCTTACTTGGGACCTCAGACGCAGAACATTGTTTTCCAAATGCAACAGTCCTCACAACACTAG


Promoter Sequence:
>Vu_00088::LG1:2358977-2360977(+)
CAATTTCAACTAAGTTTACTACCATTACCGAACGGTAAATGACCATTCAGTAACGAACGTACACTATCATAGTGGAATTTCATATTCAGAATTCATTTATCTTCAACTCATTTCTCAATACAAAATTTCATAACTTTATAAATTCATATCATAATCAAATTGCATACTTCGTACAATCCATATCATACTAATTAATCATATTCCACATAAACAATCACATCAGCATTCATACTTTATATACATTCAACCACTCAACAACATACATTCATTATCAACGAACGAGCAACGAACATACAATTCAATTAGATAAGCTTCCCTTACCTCTGAGCGTGAATGAACGTCCTAGACCGATTACGGTTCGCCTTATTACAATTCCTTCTACCCTCAACGCTCAACGACTCTTCAAACCATAATTAAACAATAGACCAAAATGGTTTAGAATGAAAATAAGAACTCATGTAACCAGAACTTGGTTTGCATGTGTACGAGAACGAACGACTAAAAACAAGAAGAACTTACCCGTTCAGAACTCGAAACCAATCGGTTCAAACTGAAGCTTGGGACGCCGGAAGTGCTTCTACGGTGCCTGAATGAAGATCGGAGAAGAGAAAGGGTGAGTTTCGGTAGAGAGAAGTGAGAGCTTTTTAGAGAGAAGAAGGAGAAATGAAAGATCAGATTTTGGAGAAGAGTGCAGGCAGAGAGTGTGACGCGAATTTCAGAAAAATCAGTTTTGTTTAAAACGAACGTCCGCTCCTCTGCTGACACCTGCATTCCACTATCTGATTTCTGACTCCCCTCAGCTTGACACCTGACGTCCGTTCAGAGGGGTTTTGGGTGCGTTTTTAATGATTCTGACACTTCATATATTCTTCTTTTTCATTTTAATAAATAATGGGTCATATACATTTAATTTTATTAGGATTAAATATGTTCAATTTCTAAACTTAGATATAAAATTAAAATTATTTTCTATTCAAAATTTCAATATATTTTAATCTTTAAATTTTAAAAATGAATATAATTTTTTTAATTTAAAACTATTTATATCATTCGATACATTTTAACTTAATTTAGAATATTATTTTTAAAAAATTAACATAATTGATTAAAAGAAACATATTTACTTATTTTAAATTTTAAAACTAAAATATATCTTTGAAAAATAAATAAATTTTAATTTTAAGTGAAGATTTAAAATTTAAAAATACATTTAATCTATTTTACGGGTGTAATTCAAAATTAATGTGAATGACAACAAATGTTGTTATACCCGTTCAATTCTAGAAAAATCAAACTCCACTGTAACCTTATATTTATCTTGAATTTTAGAAATTTGATGATCAAAGTTAAATCTATAGGCATAAATTTTTGTCTCTTGCACAAAAATATATAATTCTACCTTATGAGAATGTAACGTATTTTAATTACTTTATCAACTTTTTTTTTTATTCCTGACTTTTACTCTATTAAAATATAATATCTAAATAATCTATTGTTATACTCAATTTAGGCTTACTAATATTGCACGAAAAAGAATACATAATAGATAAATTTATTAGTGCTGACAAATTTGTTTAAAAAAGTTATGGGTTAATACCCGAGTCTAGCTAGTCTAACTAGACCTAGTTGAAAAATAGCCAATTAAAATATCAACTCATGTTGGTTTACACCAATTGAACATGTTTTTTTTATTTCTTAAGTCAAACTAGCAATTTAATTTAAGAGAATTTTAATTATCATATGCCTAATCAAGGTTTTGCTTTCACATATATAGTTTTGAAATACCTTTTATATTTAACAAAAATGAGAAAGAAATAGTGTGATCATAGTAAGACTATACAAGTGATTTCATGTTAAGTGGGTTATTTTAAAACGTTAAAAGAAATCATATTATGAAAATAAAAAGTAATTAAGAAAATAAAAATAGTTTAAAAAAAACTTAAACAGTTGGCTTAAGTGTTTGCATGCTATAAATAAAGAATTAAGAAATGATGTTAGCA


Gene Sequence:
>Vu_00088(+)
AGAGTGTGATTGACTAGTGCGTAGCAGTTGGCTCTTCCATCATTTATGATGAGCTGCCAATCCTCATTTCTTGTCGCAATTCCAACCAATGGAAGACAAGAAAATTCAGAATAATAAAAATATTAAATGAATAAAGAAAGGCATTGCAAATTGCAAAGCTATGAAGTAAGAATTATTATCTGTATGAAAAATGTCACTGCAGAAGCGATGGTGTCCATTATATAGGAAGAGAGAACTTTCTTTCTTGCTATAGTTGCAGACACAGTCCCCACAATCACATTATATCCAATCACAACTCAACAACATCAACTTCACTTTATTTTAGGCTCAAAAATCTTGGAATTTTGTTTAAATTCATTCCTTCAACCATCCTCACTTGCTTTTCAGCAACACCTCTTTCTTCCTTCAGGATCCTATAATTATTTTTTCTGCTCAGTTCCTTTCTTTATTATTATTTCTTCTCCTTTCCTTGTTACACAGACAAGGAAAAAGGGAGAAAGAACAAGTTTTTTTTTTCCTCTCCATCTGAATAAGTCTTTCTCTGTTATCTGTTGCTCTCAAACTCTTGACTCTCTCTTTTGTTTCCTAATTGGGTTAACACTTATCACATTCATTGTGTTTGCGTTCTCCTCTTGCTTTTCCATTTTTTTTCTCCCTGAAAAGTTTCATTTCTTTTCTGGGTCATTGCTGCTTTTTGTGATCTTGTTAGAATTTAGACCAATTGAGTCACGGATAATAGTTTTCATTCATCATCATCAATTTGGAGCATTCTCTCTGATCTTTTTGATCAAGTGGGTCTTTTCTAGATTCCTGACGGTCTTCTACTCTCAGAGAAAGGTATTCTGGTTTCCTTCAAAATGTTTGTGGGTTTATCCTTGATATTGTTCTTGTAAAACTTCAACTTCTGTTTTCATTTCTCTTTGATTTATCTTCCTTAGTTTTCAATTTTCCTGTCAATAAGCCCAAATTTGATTGTATGAACTTGTAAACTGAACTGATGAAGTGGGAAACTGTAGCCCTTTCTCCTACACCTTGTTCTCCAAACTCCAACACCAATTGGTTGCTGGAAAATAACAGGAGCACAAAATGGACTCCTGAAGAGAACAAACTCTTTGAAAATGCTCTTGCAGTGCATGATAAAGATACTCCAGATCGGTGGCACAAAGTGGCTGAAATGATTCCTGGAAAGACAGTACTTGATGTGATCAAGCAGTACAAAGAACTTGAAATTGATGTTAGCAATATAGAAGCTGGGTTAATCCCTGTTCCTGGTTATAGCACTGCTACTTCACCCTTCACCTTAGATTGGGTGAACAGTCCTGGTTATGATGGGTTCAAAGGAAGTGGAAAGAGATCATCCTCAGCGAGACCTCATGAGCAGGAAAGGAAGAAAGGAGTGCCTTGGACTGAAGATGAACATAAGTAAATTTTTTCACCTTTTGCAATTGTTTTTACACATACTGTTTTTTTATGGTGCTAACTGTACATGTAGAGATTTTAATATATGATATCATGATCGCTTGGCAATGTATATCTGTTTCAAAGCATGGTGTGAAAAAGCCAAAATTGGTGGATAGAATTTAATGTTAATTAAAGCAAGAGGTGTAGGGACAAGAATTCAGTGTAGATATTAAAGGGTTGGATTTTACTTTTCTCAATTGATAGCCATGTCATTTTGGGGGGGTTTGTTAGGTGAAAAAGTTGTTTTCTTTACTTTAAAGTTTTGGAATTTAAACATCCCATGGATGTTCCCTGCAGATTGTTTTTACTGGGTCTGAAGAAATATGGGAAAGGTGATTGGAGAAATATTTCTCGCAATTTTGTGATCTCTAGAACCCCAACACAAGTGGCTAGCCATGCTCAGAAGTACTTCATAAGGCAACTTTCAGGAGGCAAAGACAAGAGAAGGGCCAGCATACATGACATAACAACAGTGAATCTGACAGAAACATCCACAACTTCTTCAGAAGACACCAACAGATCCACCTCACCACATGTGCTCTCACAGCAGCAGCAGCAGCAGCAGCAGCCAAATTCTACTCCAACTACACCCACAACTCATTTTCAGTGGAGTAATCAGTCAAGCACAGGAATAGCTATGACTTTCAACCCTGCTCATGAAAGAGTCTTCATGTCTCCTTATGGTGCTAACTCCTTTGGGGTTAAAATGGAAGCACAGAATCTGCATAACGAGTCTTCTTACTTGGGACCTCAGACGCAGAACATTGTTTTCCAAATGCAACAGTCCTCACAACACTAGTCCCATGCATCATTTAGCCCTTGTTGTAGTGAATTATTAATGGATGGAACCAGAATCTTCTGTCCATTTCAATAAGTACAGTGCTTGAGTTGAGCTTTTTCCCCGAGTTTCATGTGAATATATCCTAGAATGTTGGTTAGTAATGAACTTGAAGGAAGGTACATACATTTGTTTCTTCAGCAAATAAACACTTCTTGTAAGGAGAGTGGCAGGCAACCAAGTCCACAACGTTGAGTCTTTCTTGGTTTTCTATGTTGTCTAATAATAATGGATTTCAAGCCAAGTCTATAATGGAATGCCAACTTAGAGAGGAAAAGAGACACTTCAAAGTTGATAACTATCTAGGCACACATATATATGTATGGAGTATCCTATTATTGGTATTGAAATCAAAGCAAAATATTATTTCAGAAATC