Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00229 LG1 4548289 4551175 cell division control protein 2 homolog C
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of G2/M transition of mitotic cell cycle, regulation of DNA endoreduplication, regulation of cell cycle, regulation of DNA endoreduplication, guard mother cell differentiation, regulation of G2/M transition of mitotic cell cycle, G1/S transition of mitotic cell cycle, protein phosphorylation, regulation of DNA endoreduplication, guard mother cell differentiation, regulation of cell cycle G1/S phase transition, protein phosphorylation, regulation of cell cycle, regulation of stomatal complex patterning, regulation of gene expression, protein phosphorylation, protein phosphorylation, signal transduction, regulation of cell cycle G1/S phase transition, G1/S transition of mitotic cell cycle, protein phosphorylation, guard mother cell differentiation, guard mother cell differentiation, regulation of DNA endoreduplication, protein phosphorylation
Cellular Component   is active in   cyclin-dependent protein kinase holoenzyme complex, cyclin-dependent protein kinase holoenzyme complex, nucleus, cytoplasm
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   cyclin-dependent protein serine/threonine kinase activity, RNA polymerase II CTD heptapeptide repeat kinase activity, RNA polymerase II CTD heptapeptide repeat kinase activity, cyclin binding, cyclin-dependent protein serine/threonine kinase activity, RNA polymerase II CTD heptapeptide repeat kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, cyclin binding, protein binding, protein binding, protein binding, protein binding, cyclin-dependent protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
Pathway   B 09181 Protein families: metabolism   C 01001 Protein kinases [BR:ko01001]
SNP Position Effect Amino acid change
A/G 4548698 missense_variant p.His137Arg
G/A 4548837 synonymous_variant p.Glu183Glu
T/A 4548903 synonymous_variant p.Val205Val
G/T 4549438 downstream_gene_variant
T/C 4549769 downstream_gene_variant
G/A 4549783 downstream_gene_variant
T/C 4549787 downstream_gene_variant
A/T 4549791 downstream_gene_variant
C/A 4549861 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00229.1
MEKYEKLEKVGEGTYGKVYKAREKASGNVVALKKTRLEMDEEGVPPTALREVSLLQLLSQSIYIVRLLSVEHVDKVPKAQKASANPLTKPILYLVFEYLDTDLKKFIDSHRKGPNPRPLPPQLVQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQQKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVKRQALFPGDSEFQQLIHIFKMLGTPTEEQWPGVTSLRDWHVYPRWEPQSLARNVPTLGPDGVDLLSKMLKYNPSERISAKAALDHPYFDSLDKSQF*


CDS Sequence:
>Vu_00229.1
ATGGAGAAGTACGAGAAGCTTGAAAAGGTGGGAGAAGGAACGTATGGGAAAGTGTACAAGGCACGAGAGAAAGCGAGTGGCAACGTGGTGGCGCTGAAGAAGACGCGTCTGGAGATGGACGAAGAAGGTGTGCCTCCGACGGCTCTCCGAGAGGTATCGCTTCTGCAACTTCTCTCCCAATCCATCTACATCGTGCGCCTCCTATCTGTAGAACACGTCGATAAGGTCCCCAAAGCCCAGAAGGCCTCCGCCAACCCACTCACCAAGCCCATCCTATACCTCGTTTTCGAGTACCTTGACACTGACCTCAAGAAGTTCATCGATTCCCACCGTAAGGGACCTAACCCTAGGCCACTCCCTCCCCAACTCGTTCAGAGCTTTCTCTTCCAGCTATGCAAGGGCGTGGCGCACTGTCACAGCCACGGAGTCCTGCATCGCGATCTCAAGCCCCAGAACCTTCTCCTCGACCAGCAGAAGGGGATTCTCAAGATCGCTGATCTGGGCCTCGGGCGTGCCTTCACGGTCCCTCTCAAGAGCTACACGCATGAGATTGTTACTCTGTGGTACAGAGCGCCCGAGGTTCTCCTTGGCTCCACGCATTACTCCACTGGGGTTGATATTTGGTCTGTTGGCTGCATCTTTGCTGAAATGGTGAAAAGGCAAGCGCTTTTTCCTGGGGATTCTGAGTTCCAGCAGCTAATTCACATATTCAAGATGTTGGGGACTCCAACGGAGGAGCAATGGCCAGGAGTTACTTCTCTGCGCGATTGGCATGTGTACCCGCGGTGGGAACCTCAGAGTTTGGCAAGGAATGTACCTACCTTAGGACCCGATGGAGTGGACCTGTTGTCGAAAATGCTCAAGTACAACCCTTCTGAGAGAATATCTGCCAAGGCAGCACTTGATCATCCCTACTTTGACAGTCTCGACAAGTCTCAATTTTAG


Promoter Sequence:
>Vu_00229::LG1:4546289-4548289(+)
ATCCCAACAGAGAGTCCTATATATTATCAGCATCTCAAATAAAAATGAAGAAGAATAAAAAGTCACAATATTATGAATCAAATAAAAAGAGAAGAAGTGAAGAAAAAAGGTTGAATGGCCATGGAGAAAGAGGAGTGATGACTGCAACTTCCTCCCTTGGTTAGGCTAGTAGCAAGAGTGGGTTTGATCGTGAAGGCAATGTGACACTAAGGGTGTCTTCAGGTGTGGTGGTGGCCCCAATCTGTGTGATCATGGTCTCCACACATTCTTCTTCCCCAAGCATGAACAATTAGGTTACAACGAACCTGGGTCACAACTCGTCATTCACACGTTTTTCCTAGGTTTGTGACATGCTGATTTTTGATCTATTTTTATTATGTTTGCAATTTGACAGAGTTAGGAGGGGAAAGAGGAAGTGGTCTGCCATGATTTTTGTTGAAGTAAAACTACATATTTGGTACTCTAAGCCTCTTTGAATTTGTTCCTCGTTGTGGCTTTATTGGTTTCATTGATGGGTTGTGTTGTTTTTTTTTCTTTGTGGTGTTTGTGTTTCTTTCTCTATTGAATTCAGGAGAACATTAACCACATAACACAAATAAATTAATGATACAAGACCATGACAGACCAACCTGTTTTACACATTAAAATATGTAACATGTCAGCTTGCGACTAACCCGTTCTACAACCTAACAGACTAACAGGCCAAACATGCTAGGTTAATACAGGCTAATGGGCCTGACCTACCTTTTCTTCCATGGGGTTGACGGGCTAGCCTGTCAGGCCTAAACAGTTTTGCTACCCCTAGTGGTCCTACGAAATAAGAAAAAATAAAAGGTTAAATATGTTTTTAGTTCCTGAACTTTTATGTGAAATTAGAATTTGTTCCGTTTGAAACTTTGATACATTTTGGTTTCTAAACTTAAAAAAAGTGAATGGATATAGTCATTTTAACCATATTACGTTAAATTTTATTGACGTATCAAACCTGTTTTCTAGTTAACATTGAAGTGAGAACATGTTAAATCGTATAAATAACTTAAATCTAACATGAAATACGTTTGACACATACGTAATTGGATTAAAAATACTATATTTATGCATTTTTAAAGTTTGAAAATTAAAATATATCAAAATTTTGATAAAAAACAAATTTCAATTTCACATAAAAAAAGTTGAGAGAAAAAAGAACATATTTAACTTTAAAATAAAATTAAAATTTATTATTCTAGGTGGCCTCAAAAACTAGTTTTGAAACTCATTCTAAAATCATGGACCAAATTTTCATTTTAATTTGCTCTATTTTAAAACACAAATAATATAACTTTTATAGAAAAGAAAAAAAAGAATAGAATGCATTTTAAATGTGAATTAGGAAGGTTTTAAATGGCATGTGATTTTAAACATTTCTCCTTTTATAGTTAATTTTTTTTTTAGTTTGTCGGTACCTGTGTGTACCTTGTACTGAACAAGAGTGGAGAAAAAACAGAAACACTACAGAGCAGGCAATCTGCAGTGCATTTTCTAGTCTTCCTGTTAGCACAACTCATACAGTACACATATTTATGCGCTATCACACACAATGGCAATGCGTTGTCACAAAATTTGACTTATTTTTTAAAATATGTTTAAAATATCAAAATTAATTTTTAAAACACAAATATAAAATTATCATTTAAAAGATTATAATTTTTTATATTATATTGATGGAAAGATACAAATATAGTAAAATAAAAAAGAAAAAATATTTGAAAATCAAAATGGCGCCTCTTAGACCGGATCTGGAACGTTACGTTACACAGTTTCACATTCAAATTCGCCTTTTCCCCAATCATCTACCCTAATCTGGCTCCGCGCCTCTCTTACACTCTCTTATCATCATCAACAACACTCTCAGGTTTGTCCTCTCTCTCTCTATTTCGTCTCCGTAGTTTCATTTTGCATATTCTGTGGATTATCTGTTTGATGAAATGCACCATCGATGATGAAGTGAGTAACCGAAA


Gene Sequence:
>Vu_00229(+)
ATGGAGAAGTACGAGAAGCTTGAAAAGGTGGGAGAAGGAACGTATGGGAAAGTGTACAAGGCACGAGAGAAAGCGAGTGGCAACGTGGTGGCGCTGAAGAAGACGCGTCTGGAGATGGACGAAGAAGGTGTGCCTCCGACGGCTCTCCGAGAGGTATCGCTTCTGCAACTTCTCTCCCAATCCATCTACATCGTGCGCCTCCTATCTGTAGAACACGTCGATAAGGTCCCCAAAGCCCAGAAGGCCTCCGCCAACCCACTCACCAAGCCCATCCTATACCTCGTTTTCGAGTACCTTGACACTGACCTCAAGAAGTTCATCGATTCCCACCGTAAGGGACCTAACCCTAGGCCACTCCCTCCCCAACTCGTTCAGAGCTTTCTCTTCCAGCTATGCAAGGGCGTGGCGCACTGTCACAGCCACGGAGTCCTGCATCGCGATCTCAAGCCCCAGAACCTTCTCCTCGACCAGCAGAAGGGGATTCTCAAGATCGCTGATCTGGGCCTCGGGCGTGCCTTCACGGTCCCTCTCAAGAGCTACACGCATGAGATTGTTACTCTGTGGTACAGAGCGCCCGAGGTTCTCCTTGGCTCCACGCATTACTCCACTGGGGTTGATATTTGGTCTGTTGGCTGCATCTTTGGTCAGTCCACACCCACTCCCTCTCTCACTATCTTTATTCTAGTTTGTTTGTGTTTGAGTTTGGATGAATGAGTGCTTGCAAAAGAGATTTTGAATTGGATTTTTGTCAATAAAATCTGACTTTTGAAATAGTGTGCTAAATTATAGTTGTTTTTATCTAAACTTTTTTTAGTAAATAATTGTATTTGAAGATCTCGCCATCGACCATAACAACTAGAAATAGATCAAATTATAGCATATAACTAGATGTTAGTTTCATTTTATTGAATTAAGTTGGATTTAAATTCTACTATTACAGAAGTATTATAGGTTCAAATTGTTAGAGGCAATTTCTCTGTAGGATTTAAAACTGTATTATCAATTGTCAATGCGAATGATATAGCTAATATTATGAGAGGAAGTATTATTCTAGTGAACATGTTTGTTTGTATTTTAAAAAATGTTAAGTTTATTTAATTAAAAAAATGGGGAAACAAAAAAAAAATGTCAAAAGGAAAAAGTTGGAAAGGGTAATTATTATAGAAAATAACATTCATTTTATGTGAATGCAGATACTCATTCTTCATAATGGAGATGGGAAGTAAGACATCAATTATTTCTGGAATGTTTTTATTTTCAATACTTGTAACTAACATAGTAATTTTGCATTCCTATGTTCACTCTTACGAGAATCTTTCTAGATACGTTGAAACAAACACAACCTTTTATTGAGTATTTTTCAAGTGCGTTTGGTTAAATTTGAATATTCTCTGGAATATTTCCTAAAATCTACAAGAATTGAAAATGGAAGTTAAATGTGCATTAGACTCTAACTTTTCATATTTTTATGGAAATTTCATATTGTATACTCACGGAATAGAAATATAAAATAAAACGTGCTAATGTAACTTAGAGAGGTACTTTTAGACAAACTTACTCACACTAGAACTCCAATTAGTCACATCCGAAAATATGCAGAACCAAACATGTTTATTAGTTGCTTAATATTATGTTAACTAGTATTTCAATACGATGATTCCGGATTATCTAATGTAAATCCCAACACTCCTTTCTAAATTCCTCGACATTTTTTTTGTTTGTATGTTTCTATGCAGCTGAAATGGTGAAAAGGCAAGCGCTTTTTCCTGGGGATTCTGAGTTCCAGCAGCTAATTCACATATTCAAGTATGTCCGAAAACTTATTTTTTAGTTGAGTGGAATATTAGAACTTAGAAGCTAGTCACTTTTTTTCTGTCTTTTCTTTTCATACCTTGTTTGTTGATTCAACTATGCTATTTACTAATTATTGATCCCTCAAGGATGTTGGGGACTCCAACGGAGGAGCAATGGCCAGGAGTTACTTCTCTGCGCGATTGGCATGTGTACCCGCGGTGGGAACCTCAGAGTTTGGCAAGGAATGTACCTACCTTAGGACCCGATGGAGTGGACCTGTTGTCGGTTAGTATTTGTATTTTTCCTCTCTTGAATCCTCTACGCTTCTGAATTCATAACCATCCAGTCCTTCACATAAATATATACGTAGATATTTGTACAACATAACTTCCAGTCACGTAAATGCTTCTGACGTGTTCTCTGTTTCGTAACAACCCGAACAAAATCGAAATATGTCTGAGACTGTGACATAGGTGCTCTGCTTCATTTTTTTCTCAAAGTATCTTTTTCCTGGTGATGAAGTAATCTCGATGTAGTATCTATTGATAAAAAGAAATTTTACGTGCAATAGGAAAGAATGCTGTAAACCAGGGTGGGTTCCTCATGGATATCAGGTGCCTATAAAGAAATTTTGAAGCCAATTAAGGTTGCCTTAATACTTAAAATAGCATAATTCCATTTTAATTTTGGGTGGCACGGTTTCTAGTCCTATAAAAGTGGATAAGTCCTATAAAAGTGGATAGAAGGAGTTCAAGAAAATTATTAAAAAAAGCATTAAGTATATTTGAATTAATTTTTAGAGTGGTCAATTTAACTTATCTCACATGGCTGGAGTTTGTTATATATCATACACTTAATGTGGCTTATCACACTTGATTGGAGTTTCTTGTATACTATCACCTGATCCAGCTGTGATATGTTGCTAACCTTGAGTTTTGTACGCACTACGTATACATATATAACACCCCCTTTTGAACAATATATTTTCTCTCATCTGCAGAAAATGCTCAAGTACAACCCTTCTGAGAGAATATCTGCCAAGGCAGCACTTGATCATCCCTACTTTGACAGTCTCGACAAGTCTCAATTTTAG