Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00442 LG1 7389210 7390865 PREDICTED: DELLA protein GAI isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, response to salt stress, regulation of reactive oxygen species metabolic process, regulation of seed germination, negative regulation of seed germination, negative regulation of gibberellic acid mediated signaling pathway, negative regulation of seed germination, response to abscisic acid, response to abscisic acid, negative regulation of seed germination, response to ethylene, regulation of reactive oxygen species metabolic process, gibberellic acid mediated signaling pathway, response to abscisic acid, regulation of seed dormancy process, regulation of transcription, DNA-templated, jasmonic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, response to ethylene, regulation of transcription, DNA-templated, hyperosmotic salinity response, positive regulation of transcription, DNA-templated, jasmonic acid mediated signaling pathway, regulation of seed dormancy process, positive regulation of transcription, DNA-templated, regulation of seed dormancy process, regulation of transcription, DNA-templated, hyperosmotic salinity response, negative regulation of gibberellic acid mediated signaling pathway, regulation of protein catabolic process, negative regulation of gibberellic acid mediated signaling pathway, gibberellic acid mediated signaling pathway, salicylic acid mediated signaling pathway, regulation of seed dormancy process, regulation of protein catabolic process, regulation of transcription, DNA-templated, salicylic acid mediated signaling pathway, negative regulation of seed germination, response to ethylene, regulation of seed dormancy process, negative regulation of gibberellic acid mediated signaling pathway, meiotic cytokinesis, regulation of seed dormancy process, negative regulation of gibberellic acid mediated signaling pathway, salicylic acid mediated signaling pathway, regulation of transcription, DNA-templated, response to ethylene, meiotic cytokinesis, response to salt stress, negative regulation of gibberellic acid mediated signaling pathway, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, regulation of seed dormancy process, regulation of seed dormancy process, regulation of seed dormancy process, response to abscisic acid, regulation of seed dormancy process, gibberellic acid mediated signaling pathway, regulation of reactive oxygen species metabolic process, gibberellic acid mediated signaling pathway, regulation of seed dormancy process, jasmonic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, positive regulation of transcription, DNA-templated, jasmonic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, negative regulation of gibberellic acid mediated signaling pathway, negative regulation of gibberellic acid mediated signaling pathway, regulation of transcription, DNA-templated, regulation of seed germination, hyperosmotic salinity response, jasmonic acid mediated signaling pathway, negative regulation of gibberellic acid mediated signaling pathway, response to far red light, regulation of seed dormancy process, regulation of seed germination, negative regulation of gibberellic acid mediated signaling pathway, meiotic cytokinesis, hyperosmotic salinity response, regulation of reactive oxygen species metabolic process, regulation of protein catabolic process, regulation of seed germination
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, promoter-specific chromatin binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, promoter-specific chromatin binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, sequence-specific DNA binding, transcription coregulator activity, protein binding, protein binding
Pathway   B 09132 Signal transduction   C 04075 Plant hormone signal transduction [PATH:ko04075]
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_00442.1
MGDASEVKGECSGSGKGKKMFEEEENEDKLLAGVGYKVCSSDMVDVAHKLDQLEMVMEEDGISHLASNTVHYDPTDLYGWVQNILNNAPNHTITTNSNNAVIPSPLITVPENDLTAIPLPYVEDYPQTENQNCHKRFKSSSSPLWPAISSDNILPVVLVEEAGVYLVHALMACAEAVQLGNASLASSLVKHAGTLAVSQGGSMGKVASFFAQALARRIYGFYPYETLDSSYSDMLHTHFYESSPYLKFAHFTANHAILEAFATADTVHVIDFGLKQGLQWPAFMQALAVRPGGPPAFRLSGIGPPRLDDPDSDTLSQVGLKLAELARKIRIQFQFRGFVCNSLADLDPSVLDIRAGEFVAVNSIFELHRLLARPVDIEKVLATVKRIKPEIVTVVEQEANHNGPVFLERFTEALYYYSSLFDSMEGSVAAPNEQALVMAEMYLGRQICNVVACEGDERVERHETLGQWRARLGLGGLEPVRMGSNAFRQARMLLGLYPEAGEGYRVEENNGCLLLGWHTRPLVASSAWRLAPNGLHPVRDQNEMNQDSRYC*


CDS Sequence:
>Vu_00442.1
ATGGGAGACGCAAGTGAAGTGAAAGGGGAATGTTCAGGCAGTGGGAAGGGGAAGAAGATGTTTGAGGAAGAAGAAAATGAAGACAAGTTGTTGGCAGGCGTAGGATACAAAGTGTGTTCCTCGGACATGGTTGACGTGGCACACAAGCTCGACCAATTGGAGATGGTAATGGAGGAAGATGGGATTTCCCATCTCGCCTCCAACACTGTGCATTACGACCCGACCGATCTTTACGGTTGGGTCCAGAACATTCTCAACAACGCGCCCAATCACACCATCACCACCAACAGCAACAACGCTGTCATTCCATCGCCGTTAATCACTGTCCCCGAGAACGATCTAACAGCGATTCCATTGCCATACGTCGAAGATTATCCACAAACAGAAAATCAGAATTGCCACAAGCGATTCAAGAGTTCTTCATCTCCGTTGTGGCCCGCGATTTCATCGGACAACATTCTTCCGGTGGTTCTGGTGGAGGAAGCCGGCGTGTATCTCGTCCATGCACTCATGGCCTGCGCGGAGGCCGTTCAATTAGGAAACGCGAGCCTCGCTTCAAGCCTTGTGAAGCATGCAGGAACCCTCGCTGTGTCGCAAGGAGGTTCAATGGGGAAGGTTGCATCGTTCTTCGCTCAAGCTCTGGCTCGAAGAATCTATGGATTCTATCCTTACGAAACTCTAGACTCTTCCTACTCCGACATGCTTCACACACATTTCTACGAATCGAGCCCGTACCTGAAATTCGCGCACTTCACGGCGAACCACGCAATCCTCGAAGCATTCGCCACCGCGGACACGGTGCATGTCATCGATTTTGGCCTGAAGCAGGGGTTGCAGTGGCCGGCGTTCATGCAAGCACTAGCGGTCCGTCCGGGGGGTCCGCCAGCGTTCCGCCTCAGCGGGATCGGACCGCCGCGGCTCGACGACCCCGATTCCGACACGCTTAGTCAGGTCGGTTTGAAACTGGCGGAACTCGCTCGAAAAATTAGGATTCAATTTCAGTTCCGCGGATTCGTGTGTAACAGTTTAGCTGATCTAGATCCGTCCGTTCTCGACATCCGAGCAGGAGAATTCGTCGCGGTTAACTCTATCTTCGAGCTTCACCGCTTGCTGGCGCGACCTGTTGACATTGAAAAGGTGTTAGCCACGGTTAAGAGGATTAAACCGGAGATTGTTACCGTGGTGGAGCAAGAAGCGAATCACAACGGTCCGGTTTTTCTGGAGCGGTTCACGGAGGCATTGTACTATTACTCTAGTTTGTTTGACTCGATGGAGGGATCGGTGGCGGCGCCGAATGAACAGGCGTTGGTGATGGCGGAGATGTACTTGGGGAGGCAGATATGTAACGTTGTGGCGTGTGAGGGAGATGAACGAGTGGAGAGGCACGAAACGCTGGGTCAGTGGAGAGCGCGGCTCGGTTTGGGCGGGTTGGAACCGGTTCGCATGGGTTCGAACGCGTTTAGACAGGCGAGGATGTTGCTTGGTCTATACCCTGAGGCGGGAGAAGGGTACAGAGTGGAAGAAAACAATGGGTGCCTCTTGCTCGGGTGGCACACGAGGCCACTCGTTGCCTCGTCCGCGTGGAGACTCGCGCCCAATGGTTTGCACCCAGTTAGAGATCAGAATGAGATGAACCAAGATTCCCGATACTGTTAA


Promoter Sequence:
>Vu_00442::LG1:7390865-7392865(-)
ATTGAACTGAGTAAATTTGTGAAATAGAGACAACATCCTTAGAAAATAGAATAATCAGATAATTGAAGTATGACAAAATATTTTTTATTACTTACATAATTTAGTAACACTTATTCATAATATTTGTTGTTATCGTGGATATCTTAGAATATCTTTAAACAAGGTGCTGAAATATTTTGATACAAAGTTTTATATTTTGAAATCTTATATTAGTTTTTATTGAGTCTTATTGTGCAAGATAGTATACAAAATTTCATGTAATTTGATCTCCAATAGTAAATCTCTCTCTGACTTTTAATTACATTTTTATTAGTCTTACAATTTAATATTTGCTAGTATAACAATACACAAAAATATTTTTCTTCAGATGTTGAGAGTCCTTCTACAAGAACTCTTTTTCTCCTTGAATGTCGCTTCCATAGGAAATCTTGTAAAAACGATATCTTATAACAACTCAAGAGAATATCTTGCATTAAATGTACTCTAACATTTCAATTAAATTTATTAACTCATTCATTCACAAACAAACAAATTTAATGAATATATATATATATATATATATATATATATATATATATATATATGATGGATTCTAAGTTTTAAGGTTAAGGGTATTTTAATAATTTTCATCATCAAAACTAAAAAAACTCAAACCCTTACTCACCTCTCTCATCCCTTCTGTGACTTAATTTAAAAATGAAATTTAATTAAAATACCCTTAACCTTAAAACTTAGAATCAATGATATATAAGAGTATTTTTATCTACTAAAATTCAGTACACATTGCTAAAATGTAGCAACTGAAAAACACAGGCGTAGACGCGTTAAGAAACCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTCACTGATTTTAAGGAAGCACAATCATCCATTTTTTCTCAAAATATTTTTTGTTTTTTCAAAATATTAAATTACTTAGTTTTTAATTTTAAAATGAGTAGTTTCATATTTAATTTTTAACAAAATAAAATTAAAAAGCTTAAGAATCGGATAGAAAAAAAAAAACCAAGAAAAGTAAGTTTGAAAAAGTGAAGAGAATAAGCAAACATAATAATATATTTGCGTGGAGAATGAATGAACGAAGGCTTAAAATGAATTAGAGTCGTAAAAAACAGAAAATCTTACATGATTAGTTCACGGTGAGTTAGAATTGATGTTGGACTCCATGCCTGTGATGGAACTGGCATATTCTCGAGATTTATTGTTCGGCAACAGCAACATTAAAGAGAAAAACCGTTTGGCCTATCAAACTGATGTCGATTTATTCTCCAAATCCTACCGAGCTCATTACACTGTATTATCAGGCAGGCTGTCCCTACACGTAGTAGCATTCACATCTATTAAATGTTAGCGGCTGATCCAATGATGTATGCTATCATATGCCAAAAGAGAGTATATAATGAATGAAGAGGATATTAAGAGCACTTATTGCTCAAATTCAATACTAATAAAAGATTATGACTATGCCCAATCAAATGTTGAGCGAGAGAAGAGATTCTCTCTCACCATCATAAATGTTGGTGTTGCTATTAGGACATTGTTGATTGGCCTAATCCACAAAAATTATCAAAGACAATCAATCACTTACACATAGGAACGTTAAAGCACGCGCGTGAAGTAGAGCGTGATTGAAAGATTGAAATAGAACGTAATGTGAACAGATACTGTGTCATCTCCATCAGCCAGCATCTTTCGTTCTTAGCATTGCGGTGCTGTCACGGCTCTTGTATAACCCTAAAACAAAGCTTCATTTCTAGCATACACGTATCATCACATTATGTTATTATTCGCACATACACCGCCCAAAAGTAACAGTATTTAAGATCTGGAGAGCCAAGAAAAAAACAGCATCAGCAACAGTTTCTCTGTTTTTGTTGTTTTCTTGTTTTCCTGAAGCCCGCTTAGTAAGACGAAGTGGGAAGGA


Gene Sequence:
>Vu_00442(-)
ATGGGAGACGCAAGTGAAGTGAAAGGGGAATGTTCAGGCAGTGGGAAGGGGAAGAAGATGTTTGAGGAAGAAGAAAATGAAGACAAGTTGTTGGCAGGCGTAGGATACAAAGTGTGTTCCTCGGACATGGTTGACGTGGCACACAAGCTCGACCAATTGGAGATGGTAATGGAGGAAGATGGGATTTCCCATCTCGCCTCCAACACTGTGCATTACGACCCGACCGATCTTTACGGTTGGGTCCAGAACATTCTCAACAACGCGCCCAATCACACCATCACCACCAACAGCAACAACGCTGTCATTCCATCGCCGTTAATCACTGTCCCCGAGAACGATCTAACAGCGATTCCATTGCCATACGTCGAAGATTATCCACAAACAGAAAATCAGAATTGCCACAAGCGATTCAAGAGTTCTTCATCTCCGTTGTGGCCCGCGATTTCATCGGACAACATTCTTCCGGTGGTTCTGGTGGAGGAAGCCGGCGTGTATCTCGTCCATGCACTCATGGCCTGCGCGGAGGCCGTTCAATTAGGAAACGCGAGCCTCGCTTCAAGCCTTGTGAAGCATGCAGGAACCCTCGCTGTGTCGCAAGGAGGTTCAATGGGGAAGGTTGCATCGTTCTTCGCTCAAGCTCTGGCTCGAAGAATCTATGGATTCTATCCTTACGAAACTCTAGACTCTTCCTACTCCGACATGCTTCACACACATTTCTACGAATCGAGCCCGTACCTGAAATTCGCGCACTTCACGGCGAACCACGCAATCCTCGAAGCATTCGCCACCGCGGACACGGTGCATGTCATCGATTTTGGCCTGAAGCAGGGGTTGCAGTGGCCGGCGTTCATGCAAGCACTAGCGGTCCGTCCGGGGGGTCCGCCAGCGTTCCGCCTCAGCGGGATCGGACCGCCGCGGCTCGACGACCCCGATTCCGACACGCTTAGTCAGGTCGGTTTGAAACTGGCGGAACTCGCTCGAAAAATTAGGATTCAATTTCAGTTCCGCGGATTCGTGTGTAACAGTTTAGCTGATCTAGATCCGTCCGTTCTCGACATCCGAGCAGGAGAATTCGTCGCGGTTAACTCTATCTTCGAGCTTCACCGCTTGCTGGCGCGACCTGTTGACATTGAAAAGGTGTTAGCCACGGTTAAGAGGATTAAACCGGAGATTGTTACCGTGGTGGAGCAAGAAGCGAATCACAACGGTCCGGTTTTTCTGGAGCGGTTCACGGAGGCATTGTACTATTACTCTAGTTTGTTTGACTCGATGGAGGGATCGGTGGCGGCGCCGAATGAACAGGCGTTGGTGATGGCGGAGATGTACTTGGGGAGGCAGATATGTAACGTTGTGGCGTGTGAGGGAGATGAACGAGTGGAGAGGCACGAAACGCTGGGTCAGTGGAGAGCGCGGCTCGGTTTGGGCGGGTTGGAACCGGTTCGCATGGGTTCGAACGCGTTTAGACAGGCGAGGATGTTGCTTGGTCTATACCCTGAGGCGGGAGAAGGGTACAGAGTGGAAGAAAACAATGGGTGCCTCTTGCTCGGGTGGCACACGAGGCCACTCGTTGCCTCGTCCGCGTGGAGACTCGCGCCCAATGGTTTGCACCCAGTTAGAGATCAGAATGAGATGAACCAAGATTCCCGATACTGTTAA