Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00459 LG1 7550938 7553129 PREDICTED: proline-rich receptor-like protein kinase PERK13
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, phosphorylation, developmental growth, phosphorylation, protein phosphorylation, meristem development, plant-type cell wall organization or biogenesis, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   nucleus
Molecular Function   enables   protein kinase activity, ATP binding, protein kinase activity, protein kinase activity, ATP binding
SNP Position Effect Amino acid change
A/G 7551000 synonymous_variant p.Leu487Leu
G/A 7551277 synonymous_variant p.Leu394Leu
A/T 7551319 downstream_gene_variant
A/T 7551332 downstream_gene_variant
T/C 7551503 downstream_gene_variant
T/A 7551512 downstream_gene_variant
T/C 7551516 downstream_gene_variant
C/T 7551521 downstream_gene_variant
A/G 7551539 splice_region_variant&intron_variant
C/T 7551766 downstream_gene_variant
G/T 7551995 downstream_gene_variant
T/C 7552238 downstream_gene_variant
C/T 7552259 downstream_gene_variant
A/C 7552261 downstream_gene_variant
G/A 7552287 missense_variant p.Pro255Leu
C/A 7552939 missense_variant p.Arg64Met
T/A 7553048 missense_variant p.Asn28Tyr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00459.1
MMSFCSDHTKGVSNEHVSSAVGNDSSENKRLKFMAFLRKTMWNFALACVGVGPCGGSNDHNGQRKKTSEHNKAWLLAESGAELATADPQSVHSSFRFSFCSQVEVESFNMSSSASAAAAATFLMVNLECESQVKEMKWRIHSLEKSMSPVFNPLIRFSYDEILSATHNFSKGRVLGRGALSCVYRGRVGFWRTAVAIKRLDKEDKECAKAFCRELMIASSLHNTNVVPLVGFCIDSEEGLFLVYKYVSGGSLEHHLHGKKKNVKGSSPLPWSVRYQVAIGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKIPKLCDFGLASWTSAPSVPFLCKTVKGTFGYLAPEYFQHGKVSDKTDVYAMGVVLLELLTGRKPIEAKRPPGEENLVIWAKPLLRKGKGAIQELLDPQVKYNSSYTDQMARMVDAAAACVTNEESRRPSIGEIVAILKGEVEPVLSRRRKSGYLGNGFVIDYYPQLQQTNNEMKSHLALAMLGVPECEDEDFLYDR*


CDS Sequence:
>Vu_00459.1
ATGATGAGTTTCTGTTCTGATCACACCAAGGGTGTTTCCAATGAACATGTTTCCTCTGCAGTTGGAAATGACTCTTCTGAGAACAAAAGGCTCAAATTCATGGCCTTTTTGAGAAAAACCATGTGGAACTTTGCCTTGGCGTGTGTTGGTGTTGGTCCTTGTGGTGGCAGCAACGACCATAACGGTCAAAGGAAGAAAACTTCGGAGCATAACAAGGCGTGGTTGCTGGCGGAGTCTGGAGCAGAATTGGCTACTGCTGACCCTCAATCGGTTCACTCATCTTTCAGGTTCAGTTTCTGCTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTCTTCTGCTTCTGCTGCTGCCGCTGCAACCTTTTTGATGGTAAATTTGGAATGTGAATCTCAAGTTAAGGAGATGAAATGGAGAATACATTCGCTGGAGAAAAGCATGTCTCCAGTCTTCAACCCTTTGATCAGGTTCAGCTATGATGAAATTCTGTCAGCCACTCACAATTTCTCCAAAGGGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTATAGAGGAAGAGTTGGGTTTTGGAGAACTGCTGTTGCTATTAAAAGGTTGGACAAGGAAGACAAGGAGTGTGCTAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTTCATAACACAAATGTTGTTCCTCTTGTGGGGTTTTGTATTGACTCAGAAGAGGGTTTGTTTTTGGTATACAAGTATGTGTCTGGGGGCAGCTTAGAGCATCACCTGCATGGGAAGAAGAAAAATGTGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGATATCAAGTTGCAATTGGGATTGCAGAAGCCGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCAAACATTCTGCTCTCCTCTAAGAAGATTCCCAAGTTATGTGATTTTGGATTAGCTTCATGGACTTCTGCCCCATCAGTTCCTTTTCTTTGCAAAACAGTGAAAGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTATGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCAAAAAGACCCCCAGGAGAGGAAAACTTGGTGATATGGGCTAAACCTTTGCTCAGGAAAGGGAAAGGAGCGATTCAAGAGTTGCTTGATCCTCAAGTCAAGTACAATTCGAGTTACACAGATCAGATGGCTCGAATGGTCGATGCAGCAGCTGCCTGTGTTACAAATGAAGAATCTAGGAGGCCAAGCATAGGTGAGATTGTTGCAATACTGAAAGGTGAAGTTGAACCTGTGCTCTCTAGAAGAAGGAAGTCTGGTTATCTTGGTAATGGATTTGTGATTGATTATTACCCTCAGTTACAACAAACAAACAATGAGATGAAAAGTCACTTGGCCTTGGCAATGCTAGGAGTTCCAGAGTGTGAGGATGAGGATTTTCTCTACGATCGTTGA


Promoter Sequence:
>Vu_00459::LG1:7553129-7555129(-)
TCTTCTCCACTATCGCATAACCAGTAGCATGTTCCTCTATGCCAGATCGCAAGATTCAATCTCCTCCACGCTCCAACTGCAAGCACTAAAACTATCGTTCCCCACCATCACCGAACTAGCAAAGCCAAACCAGAAAAACCCAAAAACCCCCAAATCTGGCCACAACAGAAACCCTCAAAAAGCATCCAGAACACCACTGTGAATCTCTATCCACCTCCTCTAAGCCAGAATCCCAATCGCAACCTGCAAGGGAAACCACCTTCAAGGTTCGTGCATTCCCAATTCAAAAAACCAAAACGCAGCCATGGAAATTTGGGACGCAAGAGCGAGAATGTGGAGGTAGAAGAAGTAGAAAGTCTTTAATTTTCCCACTTTGCCCTTTCAAAAAGCTTATTACACCATCATGCATTCATAACTTTTAATACAAAATTAATTAATTTATAATGCCACGTCTCATTAACTTGAAGTTTGACCATGCCATGTAATCAACACTTTAACTGTCGTTTGCTTAATTTAACGGCAGGCAGACCTTTAATTGCTAAAATTTTACAAAAATAAGGATCTTCATTATCAATATTTATTCTCTTATATGAGTAAATATACATTTAAATAAAATAAACATAGAAATGAAAATAATCACTTTATTACTGTTTTAACTTTTAAGAGATCAAGTAGATTCATCATTAAAATGACTACAGTAATTTATATATAAATCTGAATCTATTAGAACGTTTTAAAACTTATATATGTAAACAATTATATAAAGAAACACATCATGTCATGGTATCAAAATACGAAAAAACACATGATTTGAAGCAATTGGTTGTAAGGTTACCAAACTGCAAAGCCAATGGAATATTCGATATTGATTTTGCTGGATTTAAACTTCTTTTGACTCTTCTCTCATCATTTTTCTAATGCGATGGAAAAATAATTCAATAGATATTTCACAGCCATTAATAGCTTCACCATAACATAATTATTTTCACAAGTTTCACCATAACATAATTATTTTCACAAGTTGTTTCCCGTAGGATATGAAAATAAAATAAGAATATTGAAATTTCATTTTTTTTTCTTTGACGTTCCACTCAACCCTTTTAAAGTACTCAAAAAATATTATATAAGAAAAACATGTGGTATATAAGACACCTCAAATGCTTTGTTCAGACATTACATAAGCATTAATGTATTTTTAATTCAGTCATTGCATCATCACAGCCCAGGATAATTACTTAAAGAATAAATAATAAGAATATTTTTATCATCATTATTATTATAACCATTTCCATTTTATTCTTATCATATTTCTCAATCTATTTACATTTTAAAAACGGGAGTTCAGTGGTAGTTTTCCTTAATAATATATTTACTAACTTTGTAAAATTTTTTTTACAATTCCAGAAAAGATTATTGACATTTTAGTTGTTGTTTTCCATGCTTTGAATTACAAATATTTCATATATGTTTTATGATATAATTGAGTTTCTACGTGCATGCATAATGGAATCATTACATTATAAGTAGTTTCTTCTTATTTTTATATGTATGGTTTTTTTTATTCAGGAGTCCCCACCTAACAACTAAATTATGCAGAAAAATGTTCCCTGGTGTGTGTTCTACCTTGTGTCACCTTCAGTCTCAGAAAAACAAGATTCTCTTTCTCAAATTCTCACCATCAATTCATGCTCTCTCCTCCTTCTATACTATAATAATCATTTTAACATAACTTATAACTTAAAGGTGCTGTCATCATCATCACCACACTCTCACACTTACCCTTGATGATAGCCAACTTTTCTTAACCTTCTTTCACTCTGATGCAACCTTACATTAATCCAATTTCAATTATTCAAAGACATCCCCAACCACTTCCCATCTTTCTCTCTTCTTTTCTGTGCAGTTGAGAAGAAAATATGCTCCAATCCAACAAGCAAAGAACTTTCTCCCCACTTTTCTTCTTTATCTTTTTTCTCTGACCCTTTTGTTCTCACTACTTC


Gene Sequence:
>Vu_00459(-)
ATGATGAGTTTCTGTTCTGATCACACCAAGGGTGTTTCCAATGAACATGTTTCCTCTGCAGTTGGAAATGACTCTTCTGAGAACAAAAGGCTCAAATTCATGGCCTTTTTGAGAAAAACCATGTGGAACTTTGCCTTGGCGTGTGTTGGTGTTGGTCCTTGTGGTGGCAGCAACGACCATAACGGTCAAAGGAAGAAAACTTCGGAGCATAACAAGGCGTGGTTGCTGGCGGAGTCTGGAGCAGAATTGGCTACTGCTGACCCTCAATCGGTTCACTCATCTTTCAGGTTCAGTTTCTGCTCTCAGGTTGAGGTTGAGTCCTTCAACATGAGCTCTTCTGCTTCTGCTGCTGCCGCTGCAACCTTTTTGATGGTAAATTTGGAATGTGAATCTCAAGTTAAGGAGATGAAATGGAGAATACATTCGCTGGAGAAAAGCATGTCTCCAGTCTTCAACCCTTTGATCAGGTTCAGCTATGATGAAATTCTGTCAGCCACTCACAATTTCTCCAAAGGTGTGAATATTCTGTTGATGGCATTGAATTTGATTCCTTGTGTGAGATTGTGATTCTATGTTTTTTTCTGTGGACAGGGAGAGTGTTGGGGAGAGGTGCCTTGAGCTGTGTTTATAGAGGAAGAGTTGGGTTTTGGAGAACTGCTGTTGCTATTAAAAGGTTGGACAAGGAAGACAAGGAGTGTGCTAAGGCGTTTTGTAGAGAATTGATGATTGCTAGTTCTCTTCATAACACAAATGTTGTTCCTCTTGTGGGGTTTTGTATTGACTCAGAAGAGGGTTTGTTTTTGGTATACAAGTATGTGTCTGGGGGCAGCTTAGAGCATCACCTGCATGGTAGTCATTTTACCTGATTTTGCTTGACTCCTAATGCAAGCCACATAGTGGTTTCCATTGAATTTTATGTTTTTCACTGATTATAGATGACCTTTTTTATAGGGAAGAAGAAAAATGTGAAGGGTAGTTCACCACTTCCATGGTCTGTGAGATATCAAGTTGCAATTGGGATTGCAGAAGCCGTGGCTTATCTGCATAATGGAACAGAAAGATGTGTTGTTCATAGAGACATTAAGCCTTCAAACATTCTGCTCTCCTCTAAGAAGATTCCCAAGGTAAGATTCCCTTTTGCTGATAACTTGTAGTATACCGTATGTAGTAGAAATTGTATATAAAGAACACCCTACAAGTCATTCTGATTAGTTCTTTTTTGCTAAATTGCAGTTATGTGATTTTGGATTAGCTTCATGGACTTCTGCCCCATCAGTTCCTTTTCTTTGCAAAACAGTGAAAGGAACATTTGGGTGTGAACTTAACTCCTTCATATCGATTTAGCAATTTTTGTGTCGAGGGGGTTGGCTTTTTTCTTTCTTTATTTTCATACTTTGATCATTCAAATAAATTGTTCTATCTTCTTTTACTCGACAGTTATTTGGCTCCTGAGTATTTCCAACATGGGAAAGTATCAGATAAGACTGATGTTTATGCTATGGGAGTTGTTTTATTGGAACTCTTAACTGGCCGCAAGCCAATTGAAGCAAAAAGACCCCCAGGAGAGGAAAACTTGGTGATATGGGTGAGTAAATGATAAAATAAAATGTCATATCAATGATTAACACACAGATTTTAAATTTCTGACTCCTACAAGACTACAACAAAGTAGAAAATTTGTCAGTTTATCTGGTTCTACAATAAAATTGCCCGATCTAGCTGCAAAACATGACATTTAAGACTGTTTGGGTTAAGCAAATGTTTAAGGTTCAGTTTTTGTATTTCACTAGTAACCACTAAAGTTTCATCTTGTTTTTATCCATGACATTGATTTTCAGGCTAAACCTTTGCTCAGGAAAGGGAAAGGAGCGATTCAAGAGTTGCTTGATCCTCAAGTCAAGTACAATTCGAGTTACACAGATCAGATGGCTCGAATGGTCGATGCAGCAGCTGCCTGTGTTACAAATGAAGAATCTAGGAGGCCAAGCATAGGTGAGATTGTTGCAATACTGAAAGGTGAAGTTGAACCTGTGCTCTCTAGAAGAAGGAAGTCTGGTTATCTTGGTAATGGATTTGTGATTGATTATTACCCTCAGTTACAACAAACAAACAATGAGATGAAAAGTCACTTGGCCTTGGCAATGCTAGGAGTTCCAGAGTGTGAGGATGAGGATTTTCTCTACGATCGTTGA