Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00582 LG1 8981809 8984438 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   plant-type hypersensitive response, plant-type hypersensitive response, protein phosphorylation, hormone-mediated signaling pathway, protein phosphorylation, regulation of anion channel activity, hormone-mediated signaling pathway, regulation of anion channel activity, immune response-regulating signaling pathway, plant-type hypersensitive response, hormone-mediated signaling pathway, detection of bacterium, hormone-mediated signaling pathway, protein phosphorylation, regulation of anion channel activity, plant-type hypersensitive response, plant-type hypersensitive response, detection of bacterium
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane
Molecular Function   enables   protein binding, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, transmembrane receptor protein kinase activity, protein binding, protein binding, protein binding, protein binding, transmembrane receptor protein kinase activity, protein binding, transmembrane receptor protein kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, transmembrane receptor protein kinase activity, kinase activity
SNP Position Effect Amino acid change
G/T 8981826 missense_variant p.Lys6Asn
A/G 8981836 missense_variant p.Ser10Gly
G/T 8981839 missense_variant p.Gly11Cys
G/C 8981840 missense_variant p.Gly11Ala
T/G 8981847 missense_variant p.Asp13Glu
T/C 8981872 synonymous_variant p.Leu22Leu
T/C 8981892 synonymous_variant p.Leu28Leu
T/A 8981902 missense_variant p.Ser32Thr
C/G 8981905 missense_variant p.Leu33Val
T/G 8981907 synonymous_variant p.Leu33Leu
G/C 8981912 missense_variant p.Arg35Thr
T/A 8981919 missense_variant p.His37Gln
G/A 8981939 missense_variant p.Arg44His
T/G 8981943 synonymous_variant p.Val45Val
G/A 8981952 synonymous_variant p.Arg48Arg
T/C,A 8982350 missense_variant p.Ile181Lys
T/C 8982417 synonymous_variant p.Tyr203Tyr
G/C 8982422 missense_variant p.Arg205Thr
A/T 8982423 missense_variant p.Arg205Ser
A/G 8982438 synonymous_variant p.Gly210Gly
G/C 8982445 missense_variant p.Glu213Gln
A/G 8982446 missense_variant p.Glu213Gly
C/G 8982458 missense_variant p.Thr217Arg
T/A 8982465 synonymous_variant p.Pro219Pro
G/A 8982470 missense_variant p.Gly221Glu
T/G 8982475 missense_variant p.Trp223Gly
G/A 8982477 stop_gained p.Trp223*
T/C 8982481 synonymous_variant p.Leu225Leu
A/T 8982483 missense_variant p.Leu225Phe
C/T 8982486 synonymous_variant p.Ile226Ile
C/T 8982494 missense_variant p.Thr229Ile
G/A 8982505 missense_variant p.Val233Met
C/G 8982508 missense_variant p.Gln234Glu
G/C 8982526 missense_variant p.Gly240Arg
A/G 8982543 synonymous_variant p.Ser245Ser
G/A 8982564 synonymous_variant p.Leu252Leu
A/T 8982567 synonymous_variant p.Val253Val
G/A 8982568 missense_variant p.Gly254Arg
T/C 8982571 synonymous_variant p.Leu255Leu
G/C 8982580 missense_variant p.Gly258Arg
G/A 8982581 missense_variant p.Gly258Glu
T/G 8982612 synonymous_variant p.Thr268Thr
G/A 8982613 missense_variant p.Ala269Thr
C/T 8982627 synonymous_variant p.Leu273Leu
A/G 8982633 missense_variant p.Ile275Met
T/A 8982639 synonymous_variant p.Ser277Ser
C/T 8982647 missense_variant p.Ser280Phe
C/T 8982649 synonymous_variant p.Leu281Leu
A/G 8982661 missense_variant p.Ser285Gly
T/A 8982663 missense_variant p.Ser285Arg
C/A 8982701 missense_variant p.Thr298Lys
A/G 8982718 missense_variant p.Asn304Asp
A/G 8982719 missense_variant p.Asn304Ser
G/A 8982783 splice_region_variant&intron_variant
C/A 8982809 intron_variant
G/A 8982846 intron_variant
G/T 8982889 intron_variant
G/A 8982923 intron_variant
C/T 8983011 intron_variant
G/T 8983179 downstream_gene_variant
A/C 8983228 downstream_gene_variant
A/G 8983417 downstream_gene_variant
G/A 8983643 downstream_gene_variant
T/C 8983696 downstream_gene_variant
T/C 8983739 downstream_gene_variant
T/C 8983771 downstream_gene_variant
G/T 8983788 downstream_gene_variant
G/A 8983814 downstream_gene_variant
G/T 8983882 downstream_gene_variant
A/T 8983918 downstream_gene_variant
A/T 8983992 downstream_gene_variant
A/T 8984119 downstream_gene_variant
G/T 8984164 downstream_gene_variant
T/G 8984189 downstream_gene_variant
G/C 8984207 downstream_gene_variant
G/A 8984250 missense_variant p.Ser329Asn
T/A 8984266 synonymous_variant p.Ala334Ala
A/G 8984301 missense_variant p.Glu346Gly
G/A 8984375 missense_variant p.Ala371Thr
G/C 8984411 missense_variant p.Val383Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00582.1
MTRLNKLLLSGNDLVGTIPPSLGNLSSLQNISLARNHLVGSIPRVLGRLSNLKKLSLGLNTLSGVVPDSLYNLSNIQILALDANKLSGTFPSKLQLAFPHLRGFLVGENQFDGTFPSSISNITGLERFDISSNGFSGPIPLTLGSLNKLQLLHIGYNSFGSGRGRDLDFLSSLTNCTQLRILILDGNGFGGEVPGLIGNFSTYLRTLSMGLNEISGTIPEGIWQLIGLTDFTVQDNYLEGTIPDSIGRLKNLVGLDLGENKLSGNIPTAIGNLTILSELSLHSNSFVGGIPLSLKYCTRMQTFNVSTNNLNGDIPNQTFGNFEEGITEIADSRLLVSNVEEGRRMMKSKIRECLVALAGIGVGCSAELPVERMDIKDVVLELQSIKQRLCH*


CDS Sequence:
>Vu_00582.1
ATGACACGGCTAAATAAGTTGCTTCTTAGTGGCAATGATCTAGTTGGTACCATCCCACCTTCCTTGGGGAATCTTTCATCCCTTCAAAATATCTCACTTGCAAGAAATCATTTGGTGGGAAGTATACCACGTGTTTTGGGTCGGTTATCAAATTTGAAAAAGCTGAGTCTTGGTTTAAATACTTTGTCAGGAGTAGTCCCTGATTCTCTTTATAATCTTTCCAATATTCAAATTCTTGCTCTCGATGCAAACAAGTTATCTGGGACTTTTCCATCGAAACTGCAACTTGCTTTTCCACATCTTAGAGGATTCTTGGTTGGAGAGAACCAGTTCGATGGAACATTCCCGTCTTCCATATCCAACATCACCGGATTGGAAAGGTTTGATATCTCCTCAAATGGTTTTAGTGGGCCAATTCCTCTCACTCTGGGAAGCTTAAATAAACTTCAACTGCTACACATTGGCTACAATAGTTTTGGAAGTGGGAGAGGTCGTGATTTGGATTTCCTCTCATCATTAACAAATTGTACTCAACTGCGCATACTTATTTTGGATGGAAATGGATTTGGTGGCGAGGTGCCAGGTCTTATCGGCAATTTTTCTACCTATCTGAGAACTCTTAGTATGGGATTGAATGAAATATCTGGAACGATACCTGAAGGAATTTGGCAGTTAATCGGTTTAACCGACTTCACCGTGCAAGATAATTATCTAGAGGGAACTATTCCAGATTCAATTGGAAGGCTTAAAAATCTGGTAGGATTGGACCTGGGAGAAAACAAATTGTCTGGTAATATTCCTACTGCCATTGGCAATCTCACTATATTGTCTGAACTTTCTCTGCATTCAAATAGTTTTGTTGGAGGCATTCCATTAAGTCTCAAATACTGCACGCGAATGCAGACATTTAATGTTTCCACCAACAATTTAAATGGAGATATACCTAATCAAACATTTGGCAATTTTGAAGAAGGAATCACTGAGATAGCAGATTCACGTTTGCTTGTGTCAAATGTTGAAGAAGGAAGAAGGATGATGAAAAGCAAAATTAGGGAGTGTTTGGTGGCCTTAGCTGGGATTGGAGTTGGATGTTCTGCAGAATTACCTGTTGAGCGAATGGACATAAAAGATGTGGTATTGGAACTGCAGTCAATCAAACAGAGGCTGTGTCACTAA


Promoter Sequence:
>Vu_00582::LG1:8979809-8981809(+)
GGCCAACAATTTTTTTTTCTTATTAAAGTTCATAAGTGCAACTATTATTTATTATCGTGGCAATGATGTTTGACCAAGTTTCTGTTCTATAAATATTCTCACAAGAAAACTTTATTTCTGAAGCCATCTTATTAGTTTTTCTAAAGAATACTAACTGTTATAGAGTATATCTCTTGGCAAACTCAATTAAGAAATAACTTGATACCATATCAAATATAATTTAAATTTAATTTAACTTCATAGAACTAATTTGGTGAAAGAGAGGAACTGGCATAATAAATTCAAAAAACTCAATGATAGATTATTAATAACTTTGATATCACCTAGAATACACATTTTAAATACTCAATTAAATCCATCATTGATGATATTGAATTAAACTTTATTATACGAGTGTTCTTTGAAAAATAGTAAATACACTTCTAATTTTTTATTTTATGATAAAATTTGTTTGGATTATTTGTTCCTTGCAAAATTATTTTTATCACAATAATAGTTTGTCTTTATAAGTAAAATACTTTTTTTCAAGAGATAAAAACATATACATCAATATCATGATGATTCATGAGTAATGTATGTGTTTTTTTTCAATCATATTTAAAATTTCACTAAAGTATAAAATTGTTGTTTTTTTTGTTCTTTATGTTTAGTAAATACAGTTATAATGCACAAGTGAATATTATTTTATATTTATGATATTTACATTTAACTCTTTACAGTGAAAATTTTCAATAATTGAAGTTTTTTAGGTTATATTTGACAGTCCTAGGCCAATTTGAACACCCCGTGCTCACTGCCCCCACTCCCTCCGCAAGAGGTCAAGAATCATATTAGTTGCCCTTCCCATAAGGCACGGCAATGCCATTATGAAATGACAAATATTGATGCAATATTTATCAAGCAATAGAATAAAGGCATACGGGAGAAAATGCATAATAGAAATGTGGGTGTTTCTCACTATGACAGAATCCACTTACAAACTTTTGACTCTTGTTAAATTAAAAATTATATTTCATCTTCAATTACACCTTTCAACACAAGTAAAACTAAAACATTTCTTCCTACGTCTTTTAATTACTTATAAACATTGAATTTATTTACATGGCATCTTAAGAACAATAATGGAATTGAATTTATTTAAGTAATTCAATATGAGTCATTTCAAAAGTCAAAGTAAACCTGGCAAAGTTATGATCAAGTTTCTAAAACTAAAGTCATTGGCCAGGGGAGAAAAATTCAATCAATGTGTAGGTCTAAAGTTCAAGTTAGATAATGACTCATTTGAACAGTGCTTTGGAAGCACACACACTGATGTAAGAAACCTCGTCCATCTTTTGAAGATGCGAAAGCAATAGTCCCTCCAGTAGCTTTCATCTAAACATTACAATTACTTCAACATCCAACGTACAGTATGGATTTCTTAAACATTATTTTAAGGATGCCGAGAAAAATAAACGGAAGACCACGTCCTACTTTATGCAAAACAATGGCTGTAATTCTATTCATGTTCGTTCTCAGTGTTGTTTCACACAACTTAGTGCACATGATGCCACGTACACTTGCTCTATCTTTGAGTTCAGAGAGTGACAAGCTGGCTTTACTTTCTTTGAAGCAGAAGCTTAGCAATGGAGAGCCTAATGCACTTCCATCATGGAACAACTCTTTGCATTTCTGTGAGTGGCAGGGTGTTACATGCGGACATCGCCACATGAGAGTCTCTGTCTTGCGCTTGGAAAATGAAATCTGGGGTGGCACTCTTGGGCCATCTTTGGGAAATCTAACCTTCCTCACAACCCTCATTCTTTCCAACATCAACTTGTATGGGGAAATTCCAACACAAATTGGTCGACTAAAGAGGTTGCAGCTTCTTGACTTGAGTTACAACAATCTAAATGGTCAGATTCCTAAACACCTTACCAACTGCTCTAAACTTGAGGTCATTAAGTTGTTGGAAAATAAACTCACTGGAGAAGTTCCCTCCTGGTTTGGAATTGGATCCA


Gene Sequence:
>Vu_00582(+)
ATGACACGGCTAAATAAGTTGCTTCTTAGTGGCAATGATCTAGTTGGTACCATCCCACCTTCCTTGGGGAATCTTTCATCCCTTCAAAATATCTCACTTGCAAGAAATCATTTGGTGGGAAGTATACCACGTGTTTTGGGTCGGTTATCAAATTTGAAAAAGCTGAGTCTTGGTTTAAATACTTTGTCAGGAGTAGTCCCTGATTCTCTTTATAATCTTTCCAATATTCAAATTCTTGCTCTCGATGCAAACAAGTTATCTGGGACTTTTCCATCGAAACTGCAACTTGCTTTTCCACATCTTAGAGGATTCTTGGTTGGAGAGAACCAGTTCGATGGAACATTCCCGTCTTCCATATCCAACATCACCGGATTGGAAAGGTTTGATATCTCCTCAAATGGTTTTAGTGGGCCAATTCCTCTCACTCTGGGAAGCTTAAATAAACTTCAACTGCTACACATTGGCTACAATAGTTTTGGAAGTGGGAGAGGTCGTGATTTGGATTTCCTCTCATCATTAACAAATTGTACTCAACTGCGCATACTTATTTTGGATGGAAATGGATTTGGTGGCGAGGTGCCAGGTCTTATCGGCAATTTTTCTACCTATCTGAGAACTCTTAGTATGGGATTGAATGAAATATCTGGAACGATACCTGAAGGAATTTGGCAGTTAATCGGTTTAACCGACTTCACCGTGCAAGATAATTATCTAGAGGGAACTATTCCAGATTCAATTGGAAGGCTTAAAAATCTGGTAGGATTGGACCTGGGAGAAAACAAATTGTCTGGTAATATTCCTACTGCCATTGGCAATCTCACTATATTGTCTGAACTTTCTCTGCATTCAAATAGTTTTGTTGGAGGCATTCCATTAAGTCTCAAATACTGCACGCGAATGCAGACATTTAATGTTTCCACCAACAATTTAAATGGAGATATACCTAATCAAACATTTGGCAATTTTGAAGGTTTGGTAAATCTTGACTTATCTTACAATTCTTTCACTGGTTCCATCCCTTCAGAGTTTGGAAACTTGAAGCACCTTTCCGGTTTGTATCTTCAGGGAAACAAATTTTCTGGTGAAATACCTGAACAGCTTGGCGCTTGTTCCGGGTTAACAGAGCTTGTGTTGCAGAGTAACTTCTTCCGCGGAAGCATACCTTCGTTCTTGGGCTCTTTAGGATCCCTTGAATTCCTCGACCTTTCTAACAACAACTTCTCAAGCACAATCCCTGTCGAATTACAAAAGTTGAGTTATTTAAATACTTTGAACTTCTCTTTTAACCATCTTTATGGTGAGGTTCCCACAGGAGGTGTCTTCAATAATGTTACAGCAATTTCACTCATTGGAAATAAGGATCTCTGTGGGGGAATACCTCAACTGAAGCTTCCTGCATGTTCTAAGGTTCCTTCAAAGAAACACAAGTGGTCTTATAGAAAGAAACTCATCCTCATCATTGCAATTGTCGTTGGAGTGGGTTTGGTTACTTCAACACTGTTTATCAGCATCCATTTGTTCAGGAAAAGGCCCAAAGCACCATCGACTTCATGGTCTCCTAAAAATAAGTACGTGAAGGTTTCTTATGGAGATTTACACAAAGCAACCAATGGATTTTCTTCATCCAATTTGGTGGGGTCTGGAAGCTTTGGTTCTGTATATAGTGGATCACTTCTCCCTTTCAAAACACCTGTTGCTGTGAAGGTATTGAATCTTGAAAGGGTTGGGGCATCAAAGAGTTTCGAAGCTGAGTGCAAGGCTTTAGGAAGGATCATGCATCGGAATCTTCTGAACATCTTGACTTGTTGTTCAAGTATTGATTATAACGGTAAAGGTTTCAAGGCTATAGTTTTTGAGTTCATGCCTAATGGCAGTCTAGAAAGTTTGTTGCACGACAACTCTAGAAATTTCAGTGTGAACCTTGATCTTGTGGTAAATATTGCTCTTGATGTTGCTAATGCATTGGATTATCTTCATAAGGGTTCTGAGCAAGCTGTAGTTCACTGTGATATTAAGCCAAGCAACGTTCTTCTTGATGATGACATTGTTGCTCACTTGGGAGATTTTGGGTTAGCAAGGCTCCTTCATGTGGCGACGGGACATTCCAGCAGAGATGAGGTTAGTTCCTCTGCAATTAGAGGAACCGTTGGATATGTTCCACCAGGTACAGTTTTTCTCTATTCATTAAAATGGTTACCTATGCTTTTTGAATTACCAAGTGGCAACATATATGTATTTAATTTGTTGTGATAAAAAAAATGGTGGTGGAAACAGAGTACGGAACAGGTTGTCGAGTATCAACTAAAGGGGATATCTACAGCTATGGAATTCTTGTGTTGGAAATGGTGACAGGAAGGAGACCAATAGATGCAGTGTTTGGTGAGGGTCTAAGTCTACAGAAATTCTGCCAAAGGGCAATTCCAGAAGGAATCACTGAGATAGCAGATTCACGTTTGCTTGTGTCAAATGTTGAAGAAGGAAGAAGGATGATGAAAAGCAAAATTAGGGAGTGTTTGGTGGCCTTAGCTGGGATTGGAGTTGGATGTTCTGCAGAATTACCTGTTGAGCGAATGGACATAAAAGATGTGGTATTGGAACTGCAGTCAATCAAACAGAGGCTGTGTCACTAA