Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00593 LG1 9079433 9081826 PREDICTED: putative serine/threonine-protein kinase-like protein CCR3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to fungus, root development, developmental growth, response to jasmonic acid, protein phosphorylation, defense response to fungus, hormone-mediated signaling pathway, cell differentiation, defense response to bacterium, defense response to fungus, hormone-mediated signaling pathway, cellular protein modification process, hormone-mediated signaling pathway, cellular response to oxygen-containing compound, response to jasmonic acid, secondary metabolite biosynthetic process, regulation of defense response, response to temperature stimulus, protein phosphorylation, protein phosphorylation, response to chitin, secondary metabolite biosynthetic process, defense response to bacterium, cellular response to oxygen-containing compound, hormone-mediated signaling pathway, negative regulation of cellular process, defense response to bacterium, root development, regulation of immune system process, response to organic cyclic compound
Cellular Component   located in   extracellular region
Molecular Function   enables   kinase activity, protein homodimerization activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
T/A 9079793 missense_variant p.Ser549Cys
T/C 9079850 missense_variant p.Ser530Gly
T/C 9080315 synonymous_variant p.Arg504Arg
C/T 9080316 missense_variant p.Arg504Lys
C/T 9080428 missense_variant p.Ala467Thr
G/C 9080487 missense_variant p.Ser447Cys
C/A 9080495 synonymous_variant p.Ser444Ser
T/C 9080514 missense_variant p.Asn438Ser
C/A 9080594 synonymous_variant p.Gly411Gly
G/T 9080669 synonymous_variant p.Ala386Ala
T/C 9080723 synonymous_variant p.Ala368Ala
T/C 9080750 synonymous_variant p.Pro359Pro
G/A 9080884 missense_variant p.Leu315Phe
A/T 9080887 missense_variant p.Leu314Ile
A/T 9080891 synonymous_variant p.Pro312Pro
G/A 9080892 missense_variant p.Pro312Leu
T/C 9081150 missense_variant p.Asp226Gly
C/A 9081296 missense_variant p.Trp177Cys
C/G 9081300 missense_variant p.Cys176Ser
A/C 9081306 missense_variant p.Val174Gly
T/A 9081552 missense_variant p.Tyr92Phe
G/A 9081557 synonymous_variant p.Gly90Gly
G/C 9081608 synonymous_variant p.Ser73Ser
C/A 9081631 missense_variant p.Val66Phe
A/G 9081757 missense_variant p.Ser24Pro
T/C 9081764 synonymous_variant p.Leu21Leu
A/T 9081768 missense_variant p.Leu20His
A/G 9081781 missense_variant p.Phe16Leu
G/A 9081782 synonymous_variant p.Leu15Leu
G/A 9081792 missense_variant p.Thr12Ile
A/C 9081818 missense_variant p.Asn3Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00593.1
MKNNNSLFSAVTFTLFTVILLILSSLSPSHAIGSASTLAVTSAAVCGVVASEPTRRIACYSDGHVVAVAPNISFSAISGGLSYFCGLRSGNYTLLCWDTLSYFQSKRLYNNGTVLFENLALGDFQVCATAVGDGAVSCWRTNAAFELPSGSDRFSSISSGSGFSCGILKGSNWVRCWGLEARARKMESEFGNVSMASLVAGESHVCGLNSSGYLVCRGSNDFGQIDVPEGGALEFSGLALGAEHSCAIRRSNGSVVCWGGRGLFEVNATKGVSFEVLVSGSNFTCGLTTNNFSVICWGPGWVNTSGYEIPLPPLLPGPCVQSSCSECGIYPQSDSLCSGYGNICKPRPCWPPMPGPEPPQMAPPPVVAVPPASQSSAFTKGLLAFAIVGCLGGVTGICSVIYCLWTGVCLGKKKIHNSVQPTITRGGSVNGGGGGSSNSISPPSRSSTIRRQGSRIMRRQRSGTSSAKHPERAEEFTLAELVAATDNFSLENKIGAGSYGVVYRGKLADGREVAIKRGETESDLDYRPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNDENGGTPVSLVDFAVPVIMAGELAKFLDPRVEPPELNETEAVELVAYTAMHCVNLEGKDRPTMADIVANLERALALCDSSHGSISSGTVSIVSD*


CDS Sequence:
>Vu_00593.1
ATGAAGAATAATAATTCACTCTTCTCCGCGGTTACCTTCACCCTCTTCACTGTCATCCTCTTAATCCTCTCTTCACTGTCACCCTCCCATGCCATTGGTTCCGCCTCCACTCTCGCCGTCACCTCTGCCGCCGTCTGCGGCGTGGTGGCATCGGAGCCGACACGGCGCATTGCGTGCTACAGCGATGGACACGTCGTCGCCGTTGCTCCCAACATCTCCTTCTCCGCGATCTCCGGCGGCCTGAGCTACTTCTGCGGCCTCCGGTCCGGCAACTACACTCTTCTCTGCTGGGACACCCTTTCGTACTTCCAAAGCAAGAGACTTTACAACAATGGCACTGTTCTATTCGAGAATCTCGCCCTCGGGGACTTCCAGGTTTGCGCCACCGCTGTCGGCGATGGAGCGGTGTCGTGTTGGAGAACCAATGCCGCCTTCGAATTGCCTTCTGGGTCGGACCGGTTTTCTTCTATTTCGTCTGGTTCGGGTTTTTCTTGCGGAATTTTGAAGGGTAGTAATTGGGTTCGGTGTTGGGGGCTTGAGGCTAGAGCGAGAAAAATGGAGAGTGAGTTTGGGAACGTGTCTATGGCGAGTCTTGTGGCTGGGGAGTCACATGTATGTGGGTTGAATTCAAGTGGGTATTTGGTTTGTAGAGGAAGTAACGATTTTGGTCAGATTGATGTTCCTGAAGGAGGGGCTTTGGAGTTTTCTGGTCTGGCTCTTGGAGCTGAGCATAGTTGTGCTATTCGGAGATCCAATGGTTCTGTCGTTTGTTGGGGTGGGAGAGGGTTGTTTGAGGTTAATGCTACAAAAGGTGTTTCTTTTGAGGTTCTTGTTTCTGGGTCCAATTTTACTTGTGGATTGACGACTAACAATTTTTCAGTTATTTGTTGGGGTCCTGGTTGGGTTAATACTTCAGGTTATGAAATTCCTTTGCCTCCTTTACTTCCAGGGCCTTGCGTTCAATCTTCCTGCAGTGAATGTGGGATATATCCTCAATCCGATTCTCTCTGTTCTGGCTATGGTAACATCTGTAAGCCAAGACCTTGTTGGCCTCCAATGCCAGGGCCAGAACCACCACAAATGGCACCGCCACCTGTGGTGGCAGTGCCACCTGCGTCTCAGTCAAGTGCCTTCACCAAAGGGTTATTGGCATTTGCCATTGTTGGATGCTTGGGAGGTGTTACTGGGATATGCAGTGTGATTTATTGCTTATGGACTGGGGTTTGTTTAGGGAAGAAGAAAATTCACAATTCTGTGCAGCCAACAATCACTAGAGGTGGCAGTGTAAACGGTGGTGGTGGTGGTTCTAGCAATAGTATTAGTCCTCCGTCGAGATCATCCACCATTAGGCGTCAAGGGTCGCGGATAATGAGACGCCAAAGGAGTGGAACCTCATCAGCAAAGCATCCTGAAAGGGCTGAGGAATTCACCTTGGCTGAGCTTGTTGCAGCTACGGATAATTTCTCCCTTGAGAACAAGATTGGTGCTGGAAGCTATGGCGTTGTTTATAGAGGCAAACTTGCAGATGGCCGTGAGGTGGCAATCAAAAGGGGCGAAACAGAATCTGACCTTGATTACCGGCCAACGAAAGCAGCAGGAACAGTAGGATATATTGATCCTGAATATTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTATGGTCTTGGAGTGGTACTGCTAGAGCTATTAACAGGAAAGAGAGCAATATTCAAGAATGATGAAAATGGAGGCACCCCAGTGAGTTTGGTGGACTTTGCAGTGCCAGTTATTATGGCAGGAGAATTGGCAAAATTTTTGGACCCAAGGGTTGAACCACCAGAGTTAAATGAGACAGAAGCAGTGGAGCTAGTGGCATATACAGCTATGCATTGTGTAAATTTGGAGGGGAAGGACAGACCAACAATGGCTGATATTGTGGCAAATTTGGAGCGTGCATTGGCTCTTTGTGATAGTAGTCATGGCAGCATTTCCAGTGGTACAGTCTCCATTGTATCAGACTGA


Promoter Sequence:
>Vu_00593::LG1:9081826-9083826(-)
AAGATCATATCTCCCTTTGAGAAGGTAATTGGGAAAAATGAATATTACATGTCTTATTAAGGACTTGGACAAAATATACGTTTTTGTGACATTTGAAAAAAATTTAGAGAAAGATGATTTTTTTGTGTTCTTAATCTTATAAGCAACCCTAGGAATGTGAAACTCCGAAGAAGGAATCATATTTATGTCTCACCGTTCGGTAGACCCAACCACCTCCAACATATAATCATGAATGAAGACTCCAAGTGATGCATGATCAACACTCCATATGTAAGACTTTAACCTTTACAAGCCACTACCGAATAATAATTGGTGGCAACTAACAACGCCTTTGGTGAAGGTGCAACCTGTTTGTCAGTCACAGTGTGAGTCAGTCGTGGGTAATCATGATAATATTTATGTTGTAAACTAGTTTTCTCTTGTTAAATCTGATTCCTTGAGTGATATGTCTTATTTAAAAGATGTCACTCTCATCATGAATAATTTGTAGAATTTACAACAATTAGATAAACTAATAGTAGTTCAATGATAGTTCTTAATCCTTTAACATCTAAAGAGATTCGTTTTTTTAAAAGAAAATAAAATTAACTTTAAATGAGCTAATATGTACGAAGATATGAAATATTCTAATATTGAAGAGGATGATACATGGAAATCTAACGAGGATAGATCAAAGAAAGTTAATACTAAATCCTCTAAAATAAAGATGCTTAAAAATTAAAAATGGAAGAGGATTGACTAAGGACAAATTTTTTAATTTGTTAATAAATTTGTCTTTTTTTCTGATACGTGACGTGTAATAATTTAATGTAACATTTTTTTTAATAAAATGTTGAGAGTTATACCTAAAATGAACCTATTTGAAATTTAATTATATGCTTCATTTTTAATTTATTTTAAATTGTACGTTTTTAAATCAAATTTTGTACATGATGAAATAAGAGAAAAAAAAAACAGTACTTTCAATTTATGTATAAACTATTTTGTAAAGTCTCCGTAGCCAGCAAATTGAGTAAGAACTTCTTTCAATTTTCTCATCTTCTGTCCCTTTCATACTTTTTCTTCTTTTTGTGAAATCCTTCTTATTTTATTTGCAAATATGATTCTGCGTTTGCATTTCATATTTGAATTTTAAACAAAAAATGGCAAAAACTATCACATCTTTCAAATATTTTAAAATCGTTTACTATAATTAATGTTATAAGCTATCATTTGTCAGAAGGGGTAACATTAACTGAGTAAATTCTAATTCTGTAACAGTGCAAAACGAGAAACTCTTTTTATTTTAAACAGAAAACGAAAAAAGTAATTAATATAGTGGATGTTTTTAAATGAATAACTCTTTAATTTATTTTACCCACAGATTTATACCATCTTTGAACGAATTTAAGTTATAAAATATGGTTTCAAACATAAGAAAATTTGAATTACATTTATGCTATTCAACATTTCACAGTAAAAAATATTATTTTTTAAATAAATTCATTATAGTTAAATTATATTTATTATTTTTTTAATTAATATTACTGCTAATCATTTTTTATATTTGGGTTAAAAATAATTATTACAAATATTTTTAGAATAGATGTTAAGTAGAGTAATTTCAAATGAATTTCTCAAGTAGATTTCAAAAACTAAATAATTGTTTATCTCTCTTTTTTTTTTAAATATACTCATTTTTGTAATATGAAACTAAATTAAAAAAACTACTCCACGTGTGGGTGTTGTTACATACTGAGTTGTCTAAATTGAAAAAAAAAAAAAAGTGAAAGAAAAATTTACGAGCCAAACACGGCCTAAAGAAAAGAAAGAAAAGCCGATCTGAAAACAGGTTCAAAATCCACGTTATCTGATGTCAACAACAAAGTCTGCAACAAACACCCTGAAAAGTTTCACCGTACTTGAGAGTTGAGGCTCTTCAACTCTCTCTCTCTCATTCTCTCTGCCAACGATGCAGAAACAGCCGCAACCCCCAGCCCCGAAACCCATTCTTTCCCTCA


Gene Sequence:
>Vu_00593(-)
ATGAAGAATAATAATTCACTCTTCTCCGCGGTTACCTTCACCCTCTTCACTGTCATCCTCTTAATCCTCTCTTCACTGTCACCCTCCCATGCCATTGGTTCCGCCTCCACTCTCGCCGTCACCTCTGCCGCCGTCTGCGGCGTGGTGGCATCGGAGCCGACACGGCGCATTGCGTGCTACAGCGATGGACACGTCGTCGCCGTTGCTCCCAACATCTCCTTCTCCGCGATCTCCGGCGGCCTGAGCTACTTCTGCGGCCTCCGGTCCGGCAACTACACTCTTCTCTGCTGGGACACCCTTTCGTACTTCCAAAGCAAGAGACTTTACAACAATGGCACTGTTCTATTCGAGAATCTCGCCCTCGGGGACTTCCAGGTTTGCGCCACCGCTGTCGGCGATGGAGCGGTGTCGTGTTGGAGAACCAATGCCGCCTTCGAATTGCCTTCTGGGTCGGACCGGTTTTCTTCTATTTCGTCTGGTTCGGGTTTTTCTTGCGGAATTTTGAAGGGTAGTAATTGGGTTCGGTGTTGGGGGCTTGAGGCTAGAGCGAGAAAAATGGAGAGTGAGTTTGGGAACGTGTCTATGGCGAGTCTTGTGGCTGGGGAGTCACATGTATGTGGGTTGAATTCAAGTGGGTATTTGGTTTGTAGAGGAAGTAACGATTTTGGTCAGATTGATGTTCCTGAAGGAGGGGCTTTGGAGTTTTCTGGTCTGGCTCTTGGAGCTGAGCATAGTTGTGCTATTCGGAGATCCAATGGTTCTGTCGTTTGTTGGGGTGGGAGAGGGTTGTTTGAGGTTAATGCTACAAAAGGTGTTTCTTTTGAGGTTCTTGTTTCTGGGTCCAATTTTACTTGTGGATTGACGACTAACAATTTTTCAGTTATTTGTTGGGGTCCTGGTTGGGTTAATACTTCAGGTTATGAAATTCCTTTGCCTCCTTTACTTCCAGGGCCTTGCGTTCAATCTTCCTGCAGTGAATGTGGGATATATCCTCAATCCGATTCTCTCTGTTCTGGCTATGGTAACATCTGTAAGCCAAGACCTTGTTGGCCTCCAATGCCAGGGCCAGAACCACCACAAATGGCACCGCCACCTGTGGTGGCAGTGCCACCTGCGTCTCAGTCAAGTGCCTTCACCAAAGGGTTATTGGCATTTGCCATTGTTGGATGCTTGGGAGGTGTTACTGGGATATGCAGTGTGATTTATTGCTTATGGACTGGGGTTTGTTTAGGGAAGAAGAAAATTCACAATTCTGTGCAGCCAACAATCACTAGAGGTGGCAGTGTAAACGGTGGTGGTGGTGGTTCTAGCAATAGTATTAGTCCTCCGTCGAGATCATCCACCATTAGGCGTCAAGGGTCGCGGATAATGAGACGCCAAAGGAGTGGAACCTCATCAGCAAAGCATCCTGAAAGGGCTGAGGAATTCACCTTGGCTGAGCTTGTTGCAGCTACGGATAATTTCTCCCTTGAGAACAAGATTGGTGCTGGAAGCTATGGCGTTGTTTATAGAGGCAAACTTGCAGATGGCCGTGAGGTGGCAATCAAAAGGGGCGAAACAGGTACAAAGATGAAGAAGTTTCAAGAGAAAGAGAGCGCATTCGAGTCAGAATTGGCCTTCTTGTCCCGTTTGCACCACAAGCACTTGGTAAGGCTGGTGGGGTTCTGTGAGGAGAAAGACGAGAGGCTCTTGGTGTATGAGTACATGAAGAATGGAGCATTGTATGATCATTTGCATGACAAAAACAATGTGGACAAGAGTAGCAGTGTCTTGAATTCTTGGCGAATGAGGATCAAAATCGCTCTGGATGCTTCGCGAGGAATTGAGTATCTCCATAACTACGCAGTTCCATCTATAATTCACCGAGACATAAAGTCTTCAAACATTCTCATCGACGCGACTTGGACAGCGAGAGTATCCGATTTTGGATTGTCATTGATGAGTCCAGAATCTGACCTTGATTACCGGCCAACGAAAGCAGCAGGAACAGTAGGATATATTGATCCTGAATATTATGGTCTAAATGTATTGACAGCAAAGAGTGATGTCTATGGTCTTGGAGTGGTACTGCTAGAGCTATTAACAGGAAAGAGAGCAATATTCAAGAATGATGAAAATGGAGGCACCCCAGTGAGTTTGGTGGACTTTGCAGTGCCAGTTATTATGGCAGGAGAATTGGCAAAATTTTTGGACCCAAGGGTTGAACCACCAGAGTTAAATGAGACAGAAGCAGTGGAGCTAGTGGCATATACAGCTATGCATTGTGTAAATTTGGAGGGGAAGGACAGACCAACAATGGCTGATATTGTGGCAAATTTGGAGCGTGCATTGGCTCTTTGTGATAGTAGTCATGGCAGCATTTCCAGTGGTACAGTCTCCATTGTATCAGACTGA