Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00609 LG1 9317261 9318654 PREDICTED: transcription factor bHLH51-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   protein dimerization activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 9317495 missense_variant p.Thr79Ala
G/A 9317731 intron_variant
A/T 9317815 intron_variant
T/C 9317850 intron_variant
C/T 9317963 intron_variant
T/A 9317984 intron_variant
A/T 9318029 intron_variant
G/A 9318095 intron_variant
A/G 9318192 synonymous_variant p.Leu126Leu
A/G 9318209 missense_variant p.His132Arg
G/T 9318388 missense_variant p.Val192Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00609.1
MGNKRLTKPGTGIRIWSLIMHMESYHYSGWPLATNMAQCNSAPNSDQLSPFSVPTTQTPPLASDPQSLQFTEFPLWPATIAEDRVASASKSHSQAEKRRRDRINAQLATLRKLIPKSDKMDKAALLGSVVDHVKDLKRKAMCVSKGITVPSETDEVTIDFQEAEDESYKKVKKLKEKMIIKASVCCDDRPEVFPELIEVLKGLRLTAVKADIASVGGRIKSILVLCSKDSEENSVCLSTLKQSLKSAVNKIASLSVATNCPTRSKRQRFFFPSHYLQQP*


CDS Sequence:
>Vu_00609.1
ATGGGAAATAAAAGGCTCACAAAGCCAGGCACAGGCATTAGAATATGGTCTCTGATTATGCATATGGAAAGTTACCACTATTCTGGTTGGCCTCTTGCTACCAACATGGCTCAGTGCAATTCTGCACCAAACAGTGATCAATTATCTCCTTTTTCAGTTCCAACAACTCAAACACCCCCTCTTGCTTCTGACCCTCAATCTCTTCAGTTTACTGAGTTCCCTTTGTGGCCTGCAACCATTGCAGAAGATAGAGTTGCCAGTGCTTCAAAGAGTCATAGCCAAGCAGAGAAAAGGCGCAGGGACAGAATCAATGCACAGCTTGCAACTCTCAGAAAACTCATTCCCAAGTCTGATAAGATGGACAAAGCAGCATTACTAGGGAGTGTGGTAGACCATGTGAAAGATCTAAAGCGAAAAGCGATGTGTGTGAGCAAAGGCATCACTGTTCCAAGTGAAACTGATGAAGTAACAATTGACTTCCAGGAAGCCGAAGATGAAAGCTACAAAAAAGTGAAGAAATTGAAGGAGAAGATGATAATCAAAGCTTCAGTTTGCTGTGATGATCGACCAGAAGTGTTCCCTGAGCTGATCGAAGTTCTGAAAGGGTTGAGACTGACAGCAGTTAAGGCTGACATAGCCAGTGTTGGTGGCAGAATCAAAAGCATATTGGTTCTTTGTTCAAAGGACAGTGAAGAGAACAGTGTTTGCCTCAGCACTCTCAAACAATCACTTAAATCAGCTGTCAACAAAATTGCTTCGTTATCTGTGGCCACTAATTGTCCCACCAGAAGTAAGAGGCAGAGGTTCTTCTTCCCTTCTCATTACCTACAACAACCATAA


Promoter Sequence:
>Vu_00609::LG1:9315261-9317261(+)
TACAATGCTTTATTTCTCATCATTCCATTGCTTCACACAAAAAAGGACGTGCCATCTTTTTTTTATCATACAAAATATTGGTTATTAGTATTTTATTAGTTAAGAATTAAATCAATAACTTTTTTTTATATATTTTTTAAACTTACCAAATCAATTTTATAATTTTTAAATATTAGTGAGAGATTATATATAAACCTATAACTTTTTCCTTTCTTCTTTCTCACTTTATCACTCTCCTTCCAACTCGAACTTTATTACTAAGTCAATTTTATAACTATTAAAGGAAGTGTCACCTTACTTTGATCATTTTGGTTTTCCACATTTTCATCGTGACGCCTTCTCTCCGCCTATCATATATATAAAAATTGGACATATGATTTCAGATTATGGGACCCAAAAGCCGAAAATTTCGATGAGATAAGAGAAAAAGAAAAGAAAGAAAATACAGAAATTGTAAGAGAGATAATTGAGGTAGCAAAATGAGTGGTTGGATAAATAGTCGTATCACTCTTTAAGGTGCTTTATTATGAGTTACAAATTGTGAAGGAAAATGGGACCCTCCAATCACTGTAATTGAAGCTTCCTTTGTTTGCTAGCTTCTGCTGGAGACACACTATGTGAGCTTTTCAATCAGAGAGCCATTTAAAGTGTACAAAACAAGCCGCTTTTACTCAGTGCCATGCTTTGAATTTCCACCTTTCAATCACTATATTCAAAGAATTCAAGTAATTAATTAACCCATTTGATTTTGAAGAGATTTCTTGTGACTGAAACCCTAATTGAATACCTATGGTTATGTAATACTACTATCATTTATGTTAGTACGGTGATTCTCAAGATCAGTTTATGCTAACTGTTTCAACATATGATTGACACCCTATCGATTAGCATGACTGTTTTTTCATTCATTCTGTCACTTTTTAATCACATAAAATAATTGAGAGAGAGATAAAACAGGTCCACAACTTGTCTTAAGCTCAATGGACAATCCGTTTTATCACTGTTGTTACATCAGACATTTGTCTAATTGTACGAGAAAATCTTGCCTTCTTTTTTGTGTACAATTGTTCTCCTTCAGCCACCTTTTTCATCTTCCTCATCACTGCAAGGGTTGTGACAGTATATGATAGTACCGTAACTTCTCTCATCAAACTTAACCAAGTTCAAATTCAACGAGAAAGCCCTCAATCAAAGTATAACTTACCTTGACCATATCACTCTTGAAATTAAACCAATCATTGAGCATTTTGTCTGTAGGGAATCTCCCATATAGGGTTAAAAATAGTAGCATTTTCATTTTTAACTGTAAAGTTAAAATTTTAAGGTAAGTACTAGAATTATAAAGATGATTAACAGATGTTTTTGTTCTTTAATATATGGCTAGAAATGGGATCATTGCATGTTTATCTGTAAAAGATATCTATCAAGAAACATCAATTTGCTAAGCAGATTTAAAAAATTCTAGAAAGGATGAATATTTGACTGTAAAAAGAAAGAAAAAAACTAGGATGAGGACAATTATTTAGAGATAGAGCCCAAATGGTTATAATTACAAAGAGAGGAGACAAAAGACTTTATGGCTATACACACATATAGAAGAATAAGATACTGTTCTTGCAGCACTACATACATCAGTCACTGTTACTAGGTCAAGCTATTCCAGAGTTCTACACAGTGGCTCCCAAGTCCAATTGCAAGGTACTATTTCATTTCTGCTTCATATTCTTAGTCAGCACGGATACTCATTAAGATAAGCCTGTTTGTTGGGCCATGGCACCCTCTTGCTTTTTATTTTGGCTCATCCTTTTTCATCTTCTCAAACTTGAGATTCTTCACAAAGTGTAGTGAGATTTATTAGGGAGAAAATTTTCTTGGTGAAGTGACAGGCGCATACGGCCAAAAACCATTTTCATCTGACCCCATTAAAGGTCATTCCATATCACACCAATCACCATAAAGATAAGAAGAAGATCGCCCATTAAGCAAACAGTGTCAATGAA


Gene Sequence:
>Vu_00609(+)
ATGGGAAATAAAAGGCTCACAAAGCCAGGCACAGGCATTAGAATATGGTCTCTGATTATGCATATGGAAAGTTACCACTATTCTGGTTGGCCTCTTGCTACCAACATGGCTCAGTGCAATTCTGCACCAAACAGTGATCAATTATCTCCTTTTTCAGTTCCAACAACTCAAACACCCCCTCTTGCTTCTGACCCTCAATCTCTTCAGTTTACTGAGTTCCCTTTGTGGCCTGCAACCATTGCAGAAGATAGAGTTGCCAGTGCTTCAAAGAGTCATAGCCAAGCAGAGAAAAGGCGCAGGGACAGAATCAATGCACAGCTTGCAACTCTCAGAAAACTCATTCCCAAGTCTGATAAGGTAAGAGGAAAAAGAAAAAAGAAAAATTCATCATGACTCTCTTTTGCTGAGTGGCATAATTTCTCCTTACAAGTATACACTATTCTTTTCAAAGTTTGCATATTCTTTAAGACGACAAACAAGAAAGTGAAACCAGAATTTCCTAGGATGTATAGGGTATCATTAGGCCAAATTAAATCAGATTTGACGTACCAATGAAATATATGATATGATTGGTAGATAATTAAATATATGATCCCAGATGTTTGATCTTCAAGTTTATCAATATAAAAAGAATATTTGGATGAAAAATTCAATCTTTCAAATTGAAAAAAATACCTTGAGTTAAATAAAAACCAGATTCCCCGATAGCACAGTCACTTTCAATTCTCTGATAGGTGATGCAGATTTCAATTTTTCACTAACTTCCAAAGTTTAGAAGAGAAAAGAAAGTAAGAGGATCATAGCATGAAATAGCTATACTAGGTTGTGTGATAGGCCATAGATTTTAGTTCCACTAGCATCCCTATCTTTAACGGAAAGAAAGTATAACAGGAAAAATTGTGTGGGTGCAGATGGACAAAGCAGCATTACTAGGGAGTGTGGTAGACCATGTGAAAGATCTAAAGCGAAAAGCGATGTGTGTGAGCAAAGGCATCACTGTTCCAAGTGAAACTGATGAAGTAACAATTGACTTCCAGGAAGCCGAAGATGAAAGCTACAAAAAAGTGAAGAAATTGAAGGAGAAGATGATAATCAAAGCTTCAGTTTGCTGTGATGATCGACCAGAAGTGTTCCCTGAGCTGATCGAAGTTCTGAAAGGGTTGAGACTGACAGCAGTTAAGGCTGACATAGCCAGTGTTGGTGGCAGAATCAAAAGCATATTGGTTCTTTGTTCAAAGGACAGTGAAGAGAACAGTGTTTGCCTCAGCACTCTCAAACAATCACTTAAATCAGCTGTCAACAAAATTGCTTCGTTATCTGTGGCCACTAATTGTCCCACCAGAAGTAAGAGGCAGAGGTTCTTCTTCCCTTCTCATTACCTACAACAACCATAA