Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00635 LG1 9576335 9578608 PREDICTED: dehydration-responsive element-binding protein 2C
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to abscisic acid, response to stress, positive regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, heat acclimation, positive regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, response to abscisic acid, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, heat acclimation
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/T 9576377 3_prime_UTR_variant
A/T 9576401 3_prime_UTR_variant
C/A,* 9576408 3_prime_UTR_variant
C/A 9576467 3_prime_UTR_variant
A/G 9576491 3_prime_UTR_variant
T/A 9576801 3_prime_UTR_variant
C/A 9576908 synonymous_variant p.Gly360Gly
C/A 9576910 missense_variant p.Gly360Trp
C/A 9576916 missense_variant p.Gly358Cys
A/T 9576917 missense_variant p.Asn357Lys
C/G 9576969 missense_variant p.Gly340Ala
C/A 9577133 synonymous_variant p.Val285Val
T/A 9577298 missense_variant p.Glu230Asp
T/C 9577389 missense_variant p.His200Arg
A/G 9577490 synonymous_variant p.Thr166Thr
C/T 9577554 missense_variant p.Arg145Lys
G/A 9577957 missense_variant p.Pro11Ser
T/G 9577977 missense_variant p.Tyr4Ser
C/A 9577984 missense_variant p.Gly2Cys
C/T 9578107 intron_variant
C/A 9578291 intron_variant
A/G,T 9578294 intron_variant
G/T,C 9578300 intron_variant
G/C 9578414 intron_variant
C/T 9578427 splice_region_variant&intron_variant
G/T 9578435 5_prime_UTR_variant
T/C 9578436 5_prime_UTR_premature_start_codon_gain_variant
C/A 9578500 5_prime_UTR_premature_start_codon_gain_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00635.1
MGAYDQVSVRPLDSSRKRKSRSRGDGSRSVAETIAKWKEYNEHLYSGKDDGRSTRKAPAKGSKKGCMKGKGGPQNYECNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFPTAQEAALAYDEAARAMYGPCARLNFPHISDYASVRESFKDSFLAASSSCSSTTSDTTTTTTSNRSEVCAAEDAKENILPVLDKANRNDCHKAYEHASPTSRMKLEPKDEAVDRLDPGAGEGIHHAEQAEDVNEDQMDFSWIDALDFNNDDYSKSFSNDELFQVDELLGLIDNNPVDDSALMQCLDFGQTGFPGDSNPQLDNTSSSFVYQLQNPDAKLLGSLPHMEQTPSGFDYGLDFLKPVVPEDYNGVGEEPQFLNLDDVLNHDSKDMLESKE*


CDS Sequence:
>Vu_00635.1
ATGGGTGCTTATGATCAAGTTTCTGTGCGGCCTTTGGATTCTTCTAGAAAGAGGAAAAGTAGGAGCAGAGGGGATGGTTCTAGATCTGTTGCTGAGACCATTGCAAAGTGGAAGGAATACAATGAGCATCTTTATTCCGGCAAAGATGATGGTAGATCAACTCGGAAGGCACCAGCTAAAGGGTCAAAGAAAGGATGTATGAAAGGGAAAGGAGGACCCCAGAACTATGAGTGTAACTACAGAGGGGTTAGGCAGAGAACTTGGGGGAAATGGGTGGGTGAGATTAGGGAGCCAAATAGAGGGAGTAGGCTTTGGTTAGGAACCTTTCCTACTGCCCAAGAAGCTGCTCTTGCCTATGATGAAGCTGCTAGAGCCATGTATGGTCCATGTGCACGCCTCAACTTCCCCCACATCTCAGATTATGCTTCTGTCAGGGAATCGTTTAAGGACTCTTTCTTGGCTGCTTCATCTTCATGTTCTTCGACAACATCGGACACTACTACTACTACTACGTCCAATCGATCAGAGGTCTGTGCAGCTGAGGATGCTAAGGAGAATATTCTACCTGTCCTTGATAAGGCCAACCGTAATGATTGTCACAAGGCTTATGAACATGCCTCACCAACTAGCAGAATGAAGCTAGAGCCGAAGGATGAGGCTGTGGATCGCCTAGACCCGGGGGCTGGAGAAGGAATACATCATGCTGAGCAGGCAGAGGATGTAAATGAAGACCAGATGGACTTTTCGTGGATTGATGCTTTGGATTTTAATAATGATGATTACTCCAAGAGCTTTTCCAATGATGAGTTATTTCAGGTGGATGAACTTTTGGGGCTAATAGATAATAACCCAGTGGATGACTCTGCGTTGATGCAATGTTTGGATTTTGGACAAACAGGATTTCCTGGAGATAGTAATCCTCAGCTTGATAATACGTCATCAAGCTTTGTTTATCAGTTGCAAAATCCAGATGCCAAGTTGCTGGGAAGTTTGCCCCATATGGAACAGACACCATCTGGTTTTGATTATGGATTAGATTTCCTGAAACCAGTTGTACCAGAGGACTATAATGGTGTAGGGGAAGAACCGCAATTTCTTAACTTGGACGATGTTCTGAATCATGATTCAAAGGACATGCTAGAAAGCAAGGAATGA


Promoter Sequence:
>Vu_00635::LG1:9578608-9580608(-)
TAATTGTATTTATAAAATAGCATAATAATAAATTTATACTTTTATTAGAATAATATTTATGTGAAAAATATAATAATAATATAATAAATAATAATTCATCTATCAAATTATTAAGATTTAATTGTAATATAATATAATTCAAATAGAATTAGGTTGAATTATTTTATAATAAGAAGGCTTTAAAACTTTTATTTAACTATAGTTTTTTAACGTTTAGATCGAATCATATAAAAATAAATAGCAGGAATATAATAGATTTTTAATAACAAGAAATGTGATAAACTGAACAAATATAATTATCACAAGTTTAGTACAATTACAAATATTTACAGTTTTTTTTGTATAAAATAATCTATTTTCAATATAATGAATCAGTTAGAAATCTCAAATCAATAAGTGATATTTAAACATATTAAAATATATAAGAAAAAATGCATTTTTATTTCATAAATTTGTTTTGTAAATTGAGTTAGAAGGTGGAATTTTTATCAAACCTATAGTATGGAATCATCTAATAATGTCTTGTTCATAGAAAAGAAAGTTTCTGTTTCACTCTTGCACAAGTTAGAACCACCTTTCATCAAAAGTATTGTTAGGTTTGGTCGTTTGAATAATAATGGATATGATCGAACCGCAACTCATAAACCACGTGTACCATTCCCACAACTACAAGTGGCATATATATGACTGGCCGCGTGTCCCACGTGCATGGTTCACTTCTATAAAAAAAATCACACTCATCTCATTACTTTGGATTGGACATTGGGACTATAAACTCAAATTAGCTATTTTTTTTTCTTTTCAAATCTTCAATATTATCTATTTATAGTAATTTCTTAATTAATAAACACTTTTTCTTTCATTCTGAAAATCGATTCTCTAGATGGCATGTGACCACTTTACTTGCATATCACATATTCATTTTATCATCACAACTTTTCAAAGGCAAATTGTAATGTTACTTTTAGATTTTATAATTTGAATATGTAAAAATATTTTTTTTTTTGGGATTTTAGTTCATTTTTATATGATTTTAAATGTTTTTAAAATTAAAACCAGTTTATTTTCCACGGTTGAGTTAATATATATCGCTTCAAAATTTAAAAATCCTGATTCCATATCTACCGCTTTGGACCGTTCTACAGATTCCTTTCTGTTTATTATTAATTCCTTCTATGATCACAAAACGGTGTGTTAAGCAGTTTTAGTAAAAATATAAAAAATAAAAACAGAAAAAACTTATTTCTAGCATCATTATCATTTTATTCATACACACTATCCACTATTTTTCATGAAGAAAAAATTCATATTATTTTACTAATTATAACAATAATTTAAGTAAAATAAAAAAACAAGCACTCCGTTTGGAGAACTCGCCTTGTAATTAGGCTATTTTATCCCACTTCTTCAAAAACTGACTTTTTAAATAATAGAAAAAAAGTATTTGACTTCCTTAAATTTTAAGAAAACTTTTTGGTTGATTTGATTTAATTTTTATTTTTGCTGTATTTTAACAATTTTGTAACGAGTAACTAGAATAAGATTCATGAACGTAGAAGCTAGAAAGCTACTAGTGTGAACAAGCAGATCTCGTACAATCGGGCCGTGGACCCAGTTTCATCACAGTAAAGCCCGCTTTCCAAGCGTCAGCAACAGGGATGAAACAGCAATACAAGTATATATAATAATCACAATAAAGATTAACATCATGCGATATTTTATTCAGTAAAAGGACAAGATATTTAAGTTAGATATACTATAACAATGGCATAATGGAGAATATACCCGAAAGATAGGGACATAATGGAAAAGACCAAGAAGATTAAAAAGAACAGGTACTTGAGAAGAAAGAAAACGAGCAGCGTTTTAGTGGCTCGGGAAGGTTCGAGGGCCACGTGCCAGCTGGTTCGGAAGTCCGAAGCATGATAACGCGACTAAGAAAACGCCACGTCATCAGTTCTGGGTGCAATTTAAAAATATCAGAAAAATCTAGAGAAGGC


Gene Sequence:
>Vu_00635(-)
TATAAATAAAGATTACAGGGTGCAGCCCAGAGATTTTCTGAATCCGCTATAACCATATCAAACCAACACAAACCTTGTTACTCTTCACTCCAAACCAAACCAAAACACGGACACACTACAGAGGAAAAACAAAAAGGGACAAGCCTAAAATTAAATACACAGCGTTTTCTCTACTAGGTTAGTAGCATTGGATTCTTCCTCTCTGTTTATGGTGCACGCTTTTTAATTTCTTCACTGCAAATTCTTTGAGTGATTTTTTTTTCATTATTGTTTATAGGTTTAGTTTTTGGTTATTTATCTGTCTGTATCGTAATTTCGTTTTTTTAAAGGAGAAAACTTTCTGGGCAAGTTTATTTTATTTTTTTACATTTTTATATTTTGGCTTTAGCTTTATCTATTACTTGGGGGTTACGAAAATTCGTTTCTTGGTTGAATTTATTATAGGTAGTGTAGTCAATAAGAGCGTGTTGCGAAATCCTGTTTGTGATTGTCCACCTTTGTGTTGTGTTTTGTTCTTATGAGTTGCTGGTTACTGAATAATTTATTTGTTTGTTTTGAAGTTCAGATTGTGAATTCAGTTGTTGAGTTTTGCTGCGGACTTAGCAGTGAAGTTTTGTGGAGATGGGTGCTTATGATCAAGTTTCTGTGCGGCCTTTGGATTCTTCTAGAAAGAGGAAAAGTAGGAGCAGAGGGGATGGTTCTAGATCTGTTGCTGAGACCATTGCAAAGTGGAAGGAATACAATGAGCATCTTTATTCCGGCAAAGATGATGGTAGATCAACTCGGAAGGCACCAGCTAAAGGGTCAAAGAAAGGATGTATGAAAGGGAAAGGAGGACCCCAGAACTATGAGTGTAACTACAGAGGGGTTAGGCAGAGAACTTGGGGGAAATGGGTGGGTGAGATTAGGGAGCCAAATAGAGGGAGTAGGCTTTGGTTAGGAACCTTTCCTACTGCCCAAGAAGCTGCTCTTGCCTATGATGAAGCTGCTAGAGCCATGTATGGTCCATGTGCACGCCTCAACTTCCCCCACATCTCAGATTATGCTTCTGTCAGGGAATCGTTTAAGGACTCTTTCTTGGCTGCTTCATCTTCATGTTCTTCGACAACATCGGACACTACTACTACTACTACGTCCAATCGATCAGAGGTCTGTGCAGCTGAGGATGCTAAGGAGAATATTCTACCTGTCCTTGATAAGGCCAACCGTAATGATTGTCACAAGGCTTATGAACATGCCTCACCAACTAGCAGAATGAAGCTAGAGCCGAAGGATGAGGCTGTGGATCGCCTAGACCCGGGGGCTGGAGAAGGAATACATCATGCTGAGCAGGCAGAGGATGTAAATGAAGACCAGATGGACTTTTCGTGGATTGATGCTTTGGATTTTAATAATGATGATTACTCCAAGAGCTTTTCCAATGATGAGTTATTTCAGGTGGATGAACTTTTGGGGCTAATAGATAATAACCCAGTGGATGACTCTGCGTTGATGCAATGTTTGGATTTTGGACAAACAGGATTTCCTGGAGATAGTAATCCTCAGCTTGATAATACGTCATCAAGCTTTGTTTATCAGTTGCAAAATCCAGATGCCAAGTTGCTGGGAAGTTTGCCCCATATGGAACAGACACCATCTGGTTTTGATTATGGATTAGATTTCCTGAAACCAGTTGTACCAGAGGACTATAATGGTGTAGGGGAAGAACCGCAATTTCTTAACTTGGACGATGTTCTGAATCATGATTCAAAGGACATGCTAGAAAGCAAGGAATGATGTTCTTGTCCCTATAATGAGGATGTTGTTTATGTCTGAAGTCTACCTCATTTTCATCTGGTTCAAGCATCACAAGTAATCTGTCTCCAGGGTTGTTGTCCCCTTTTAGCAATATATAGGTGCCTTAGACGAATACAGTTATACAACTAATATACAAGAAATTTGATATCTTTATGTTCTTTTAAATATGCTGATTCTCTGTAGGATTTTTTAAAATGGAGAATTTAGCTGACAAAATTTGTTAATTCTTTTGTTTACATGTTTTCTTTTTGAATTCAAATTGGACTGCCTTTAACTTCATAGGTGGAGCTGAGGAATAGGCTGTTTAAAGTCGTTTGTTGTTGTTGTCAACTGTAGTGTCTTGAGCACTGACATGACAGAAGATTTCTTTGTACGAGGGACAACTAGTATATGTCTGTATTGCGTACTTTTGTGTATAAAAACTGAACAAGCAGGCGAATGTATATATTGAAAATTATTCTGAATTTTGTTGCTGTC