Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00774 LG1 11068851 11073066 PREDICTED: protein FAR1-RELATED SEQUENCE 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, seed development, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, regulation of flower development, negative regulation of transcription, DNA-templated, regulation of flower development, seed development, seed development, regulation of flower development, regulation of transcription, DNA-templated, seed development, regulation of transcription, DNA-templated, cellular protein modification process, regulation of flower development, negative regulation of transcription, DNA-templated, regulation of flower development, embryo development, negative regulation of developmental process, negative regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, plasmodesma, nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, zinc ion binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
T/C 11069060 downstream_gene_variant
T/A 11069135 missense_variant p.Glu522Asp
C/T 11069235 downstream_gene_variant
A/G 11069289 downstream_gene_variant
T/C 11069290 downstream_gene_variant
A/T 11069542 downstream_gene_variant
T/A 11069572 downstream_gene_variant
G/C 11069590 downstream_gene_variant
C/A 11069592 downstream_gene_variant
C/T 11069596 downstream_gene_variant
G/T 11069599 downstream_gene_variant
T/G 11069600 downstream_gene_variant
A/G 11069783 downstream_gene_variant
G/A 11069796 downstream_gene_variant
A/C 11069803 downstream_gene_variant
C/T 11069840 downstream_gene_variant
G/A 11069874 downstream_gene_variant
G/A,* 11069940 downstream_gene_variant
T/A 11069941 downstream_gene_variant
G/C 11070188 downstream_gene_variant
G/A 11070222 downstream_gene_variant
A/T 11070229 downstream_gene_variant
C/T 11070415 downstream_gene_variant
G/A 11070537 downstream_gene_variant
G/C 11070538 downstream_gene_variant
T/C 11070633 splice_region_variant&intron_variant
G/A 11070742 downstream_gene_variant
G/A 11070805 downstream_gene_variant
A/G 11071021 missense_variant p.Trp357Arg
T/C 11071081 missense_variant p.Lys337Glu
A/G 11071212 missense_variant p.Ile293Thr
A/G 11071219 missense_variant p.Trp291Arg
T/A 11071455 missense_variant p.Lys212Met
C/G 11071464 missense_variant p.Arg209Thr
C/A 11071491 downstream_gene_variant
A/T 11071493 downstream_gene_variant
G/A 11071723 downstream_gene_variant
A/G 11072027 downstream_gene_variant
A/G 11072041 downstream_gene_variant
G/A 11072074 downstream_gene_variant
T/C 11072464 synonymous_variant p.Pro201Pro
T/A 11072822 missense_variant p.Asn82Ile
A/T 11072869 synonymous_variant p.Arg66Arg
G/A 11072956 synonymous_variant p.Val37Val
C/T 11073059 missense_variant p.Ser3Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00774.1
MISMGEGSDHQAMADDGNVEHIGGGVNKAENNSGSHVEVGVSEPYVGREFDSEDAAKTFYNEYARRVGFSCKAGAKGRSKANGENMYCEFVCGREDLKRKLAGSCNAMIRIEKKGQNNWVVTQFVKEHSHSMANLSKVQSIRPRKHFSSVGRTMPETYQGVGLVPSGVMYVSMDKNGIPTKNIHGIRNIPAVATIAETVHPVKTNRIEEDGESSIFRVAKFDDDQKAYVVTLNLSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKVSAGSVEHAGELHVHESLASRYSNLCWEAIKYAEEGAMTVETHDTAIGALRESAKKISFMKRSVAKVSPPSHPVSGAAYDDRKSPTSTADTNPLLWPQQDEITKRFNLNDASTPVQSVADLNLPRMTPVSLQRDDGTPENMVVYPCLKSLTWVMENKTSTPGNRVAVINLKLQDYSRNPSTESEVKFNLSKVTLEPLFNHMVNIRDQLSAPTRKFAVLNLKLPVADTNTGVCEVKFQVSRETLVAVLRSMDYIREQLSVPGDAQTEAAILKRPRK*


CDS Sequence:
>Vu_00774.1
ATGATAAGCATGGGAGAAGGAAGTGACCATCAAGCTATGGCGGATGATGGGAATGTTGAACATATTGGAGGTGGAGTTAATAAGGCTGAAAACAACTCTGGCTCTCATGTCGAGGTTGGGGTTTCTGAGCCATATGTGGGTAGGGAGTTTGATTCTGAAGATGCTGCAAAGACTTTCTACAATGAGTATGCCAGACGTGTGGGTTTCAGCTGCAAAGCTGGTGCAAAGGGTCGTTCCAAAGCCAATGGGGAGAATATGTACTGCGAATTTGTCTGTGGCAGGGAGGATTTGAAAAGAAAGCTTGCTGGCAGTTGCAATGCAATGATTAGGATCGAGAAGAAGGGCCAAAATAATTGGGTTGTTACACAATTTGTAAAGGAGCATAGCCATTCCATGGCAAACCTTAGTAAGGTGCAGAGTATTAGGCCTCGCAAGCACTTTTCTAGTGTGGGAAGAACCATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGCGGTGTGATGTATGTATCTATGGATAAGAATGGCATTCCTACTAAGAATATTCACGGGATTAGGAATATTCCTGCTGTTGCTACTATTGCTGAAACAGTTCACCCAGTTAAAACCAACAGAATTGAAGAAGATGGAGAAAGTAGCATATTCAGGGTTGCAAAATTTGACGATGACCAAAAGGCTTATGTTGTCACATTAAACCTTTCTGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTATGTAGACATGTTCTAACTGTTTTTACTGTGACTAATGTACTTACATTGCCATCTCATTATATTTTAAAACGGTGGACAAGAAATGCAAAAGTCAGTGCTGGGTCAGTTGAACATGCTGGTGAATTGCATGTACATGAGTCTTTGGCATCACGATATAGCAATCTTTGTTGGGAAGCCATCAAATATGCTGAAGAAGGGGCAATGACTGTGGAAACACATGATACTGCAATTGGTGCTCTTCGAGAAAGTGCAAAAAAGATTTCTTTCATGAAGAGAAGTGTTGCCAAAGTTTCCCCACCCAGTCATCCCGTCAGTGGGGCTGCTTATGATGACAGAAAATCCCCTACTTCAACAGCAGATACAAACCCTCTTCTGTGGCCACAGCAGGATGAAATAACGAAGAGGTTTAATCTTAATGATGCTAGTACTCCTGTTCAATCAGTTGCTGATCTAAATTTACCACGAATGACCCCAGTGTCTCTTCAGCGAGATGATGGTACACCTGAAAACATGGTGGTTTATCCCTGTCTGAAATCATTGACATGGGTAATGGAGAACAAGACCTCAACACCAGGGAATAGAGTGGCTGTTATCAATCTTAAGTTGCAAGATTATAGCAGGAATCCATCAACAGAATCGGAAGTTAAGTTTAATCTCTCAAAAGTTACTTTGGAACCGTTGTTTAACCATATGGTCAACATCAGAGATCAACTTTCTGCACCAACTAGGAAGTTTGCTGTATTAAATTTAAAGCTTCCAGTTGCCGATACAAATACTGGTGTGTGTGAAGTCAAGTTTCAGGTGTCCAGGGAAACATTAGTTGCTGTACTACGATCAATGGACTATATACGTGAGCAACTATCGGTTCCTGGCGATGCACAAACAGAAGCTGCTATATTGAAAAGACCTCGGAAGTGA


Promoter Sequence:
>Vu_00774::LG1:11073066-11075066(-)
ATTAAATAAGTTGTGTTTTGATATTTTTTGTAGTATTTTTGATATGGACATTTTGTAATTACATGAATTTCGTCTAATTTTATTATCGTGATTTACGTGTTAATTTTGGCGTTAACGTACCTTAAAATATCGCATATTAAATTTAATGTAAAGTTATTATCAGAGTCTAATATTTATAAGATGTTGAGTGAAAAAAAATATGAAATTATTGTGGAGACGTCAATTTTAACGAAGCCCGGTCTATAGATATTAAAAACTTATTTAACGGTTAAAATAATTATATCTAACTATAAAAGTAAATTAAATTGGAACAAGTGAATGATATTTTTAGCCATGGTATTCAATTTAAAAATGATAGTATTTTGAAAATGTAACAATACATGCATATCTAGATATACATCAGTTTATATTTTTTGATTGAATTTTAAAGGTGAATAAAAAGAATAATAAAATATATACAATAAATGGTGGAATTTATAAAATATGCAATATGGTTAACTATTTATAAATTTAATTAATAGGGAAGTTATAATTAAAAATGAATAAACTTATGATATAATTATATGCTATCAGAGTATACTGTTAATAAATATTTATTTATTCTAAAGTATATCAAAAGGAAGGTTTAATTGTAGTTTTGTTATCTATGTTTTGTAAAATTCATGATTATGTTTCTTATTTTTTCATTTTTTTAACCCTTTATTTTAGCTGTTGTTTATTTTTCAATTTTAGAAAAGATATGGAGTTACAAGTAGGTGCTACCTTTTCAATTCTGGAAGAAAATCGCGAGTATTATATGTGTTTTTTTATGTTATCATGTTATTCTAATAATAAAAATTGTACGAATAGTTGAATTGGAAATTTAATAAATTATGAATGGTTAAAACTAAATAATTAAGAATATGTTAAAAATATTTAAGGATATAACATTATTGAAATTTTTTTAAAAAAAAACTTAAATTTTTAAAAAGGAAGAAAATGTGAATTTTGAAAAATATAGAATGGAAAATTATAATTGGCCTTATAAAAGAATACAATCGTAAAAAGAATGGACGGTGGTAATATTACGTTACGTGGAGCCTGATCGATCGATGGATGATGGACGGTGCACAGTGCACTCAAGAAATCTCACCACAAAAAACAGAAAAATAAACGAAGTTACAATTTTAAATGAATTTCGACCTAGGCGAACAATAACCGTCAGATTTAGATCAACGGTAAATATGACGTGTGCACTCATATCTAACATATGCAACGCTACATCCACCCACTCTTACGCTCCTTCCTCCTCCGTCTCCGCAACCGCCCGGAGCTGCTCGACCACAAACCCTAGCTCTTGCCAAAACACACCGGTTTCGTTTCCTCGCCGTTCGTGCGTTTCTGCGATTCTTCAACCTGTTAAGGAGCACTGAAATTATTGACTGGCTTTATTAGCGCCATACATATTCATCTCTGTAAGCTAGGACTTCCTATCTCTTGTTTAATTTTTATAATGAATTATTTAATAATTTCTAATTTTATTCATTTTTTTTTATTTCTGTGAATTTTACTGAAAGTTTTGCGACTTCTTTGATTACTTCATCTCTAGGTATGCATTTTGACCTATCTGTGATAACTAATTGTAATAATTAATTGAATGTTAAAATTGTGTGTTGTAGTTAAGATGTTTAGCTCAAACCTATCTGACATTGAACCTTTGTTCCATTGGTATTGTTATTGGCTATACCAAATATCTGATAATGCATGTCAGTTTTGAATTATTAACTGCACTCTGTGACAGGACTGAGTTTTTATTCGTGTCACCTTATATGACCTTAATTTGGTAAATGGAAATTTTCTTTTAATCTGTTATTTTCTCCTTTCTGTGGTTCGTTTCTTTGTTTTGCAACATTAGAAAACGCTGCATTTTTAATTTTGGATTTGCTTGCTGCATAGGCAAATTAAGGCAACGTATCTTTCTATTTGATAGGATTAAAGCATGCAACTTTTGCTACATACAA


Gene Sequence:
>Vu_00774(-)
ATGATAAGCATGGGAGAAGGAAGTGACCATCAAGCTATGGCGGATGATGGGAATGTTGAACATATTGGAGGTGGAGTTAATAAGGCTGAAAACAACTCTGGCTCTCATGTCGAGGTTGGGGTTTCTGAGCCATATGTGGGTAGGGAGTTTGATTCTGAAGATGCTGCAAAGACTTTCTACAATGAGTATGCCAGACGTGTGGGTTTCAGCTGCAAAGCTGGTGCAAAGGGTCGTTCCAAAGCCAATGGGGAGAATATGTACTGCGAATTTGTCTGTGGCAGGGAGGATTTGAAAAGAAAGCTTGCTGGCAGTTGCAATGCAATGATTAGGATCGAGAAGAAGGGCCAAAATAATTGGGTTGTTACACAATTTGTAAAGGAGCATAGCCATTCCATGGCAAACCTTAGTAAGGTGCAGAGTATTAGGCCTCGCAAGCACTTTTCTAGTGTGGGAAGAACCATGCCTGAAACTTACCAAGGAGTGGGGCTTGTTCCAAGCGGTGTGATGTATGTATCTATGGATAAGAATGGCATTCCTACTAAGAATATTCACGGGATTAGGAATATTCCTGCTGTTGCTACTATTGCTGAAACAGTTCACCCAGTTAAAAGTCCGTCAATGATGAATTATGCTGTTAGACCACCTATTCAAAGGAGGACATTAGGGAGGGATGCTCACAACCTGCTGGAGTACTTTAAGAAAATGCAAGCTGAGAACCCTGGTTTCTTCTATGCAATACAACTTGATGATGATAATCACATGTCTAATGTGTTTTGGGCAGATGCGAGATCAAGGACTGCTTATGGTCATTTTGGTGATACGGTTACTATGGACACAACTTACAGAATAAATCAATATAGAGTGCCCTTTGCTCTGTTCACCGGGGTAAACCATCATGGTCAGATGATTTTGTTTGGTTGTGCACTCCTCTTGGATGATTCTGAGGCTTCTTTTATCTGGCTCTTCAAGACATTTTTGACAGCAATGAATGACCGTTACCCTGTCTCTATCACTACTGATCAAGATAGAGCTATACAAATAGCAATTTCACAAGTTTTTCCTCAAACACGGCACTGTATAAGCAAATGGCATGTCTTGCGAGAAGGCCATGAGAAGTTGGCCTATGTATGCAACATGCATCCAAATTTTCAGATTGAACTATATAATTGTATTAATCTGACAGAAACAGTTGAGGAGTTTGATTCATCGTGGAATTTTATCATGAATAAATATGATCTCACAAAAAATGATTGGCTTCAGTCATTGTACAATGCTCGTGCACAATGGGTTCCAGCATATTTCCGTGATTCATTTTTTGCAGTAATATCTCCTAATCACGGAATCGATGGTTCTTTTTTTTATGGTTTTGCCAACCATCAGGCGACATTGCCAGTGTTCTTTAGGCAGTACGAACAAGCTTTAGAGAGCTGGTTTGAAAAAGAATTAGAAACAGATTATGAGACAATTTGCACCACCCCTGTCCCGAGGACACCTTCCCCAATGGAGAAGCAGGCTGCTAATCTCTATACTCGGAGAATATTTTCAAAGTTTCAAGAAGAGCTAGTGGAAACCTTTGCTTATACAGCCAACAGAATTGAAGAAGATGGAGAAAGTAGCATATTCAGGGTTGCAAAATTTGACGATGACCAAAAGGCTTATGTTGTCACATTAAACCTTTCTGAGTTGAGAGCTAACTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTATGTAGACATGTTCTAACTGTTTTTACTGTGACTAATGTACTTACATTGCCATCTCATTATATTTTAAAACGGTGGACAAGAAATGCAAAAGTCAGTGCTGGGTCAGTTGAACATGCTGGTGAATTGCATGTACATGAGTCTTTGGCATCACGATATAGCAATCTTTGTTGGGAAGCCATCAAATATGCTGAAGAAGGGGCAATGACTGTGGAAACACATGATACTGCAATTGGTGCTCTTCGAGAAAGTGCAAAAAAGATTTCTTTCATGAAGAGAAGTGTTGCCAAAGTTTCCCCACCCAGTCATCCCGTCAGTGGGGCTGCTTATGATGACAGAAAATCCCCTACTTCAACAGCAGATACAAACCCTCTTCTGTGGCCACAGCAGGATGAAATAACGAAGAGGTTTAATCTTAATGATGCTAGTACTCCTGTTCAATCAGTTGCTGATCTAAATTTACCACGAATGACCCCAGTGTCTCTTCAGCGAGATGATGGTACACCTGAAAACATGGTATGTGAAGGAGAACCCCTTCCCCATTTTTTATATGGCATATTTGTGGGATTGGAACCGCATTTCAATGAATTGGTTCTCGTGTTCTATTCTGTAGGTGGTTTATCCCTGTCTGAAATCATTGACATGGGTAATGGAGAACAAGACCTCAACACCAGGGAATAGAGTGGCTGTTATCAATCTTAAGGTATGCTGGTAATTATATGAATGATGAAAACCTGGTAGTAATAGTCATGATTTAGTTTCAAGTTGGTTTAGATACCTGTGTTTTTGCATGAGAATTTCCGAGACTCAACCTTTAGTTCCTTTATGCATATAAATGTCTTCTGTAACATTTGATCGTGGTAGGTTATCCTACTTTTATCCTCTTGCATTGTTTTAAAAAATAGCGAAAATGTGAGGATCCTGAGTCCTTTAAGCATATTTCTAATGCAGTTGCAAGATTATAGCAGGAATCCATCAACAGAATCGGAAGTTAAGTTTAATCTCTCAAAAGTTACTTTGGAACCGTTGTTTAACCATATGGTCAACATCAGAGATCAACTTTCTGCACCAACTAGGAAGTTTGCTGTATTAAATTTAAAGGTGTGTGATTTTGTTCCTTTGGACTTAACTTTCTCAAATAGGCCCTGTCCTTATGTTTTGTTACTATTACTACTAGAAAAGCAGGTATGGATGCTGCTTTGCATTTTCATATTAAATTTCCTTGAAGAACTTCTCTTCTTACTGAGTGGCTGTAAATGGGAGTGGTAGAATATATATTTTGATTTAAATTTATAAGGTTAGATTTTATCTAAGGAGCACATATTATTAATTAGGTTACCAAGGAAGAAAATTTTAATTATTTCGATTGGCAAAATACGTAAAGGGGACAGAGCTAGACTGTTGTTTTTCAGAGGCTGGTGTTATAGGTGAATGACAATGATTATTTGGGAAATTGTTTAGGTACGAGAATATTTATATTGGCTATTAAAGAAAGTAGGCATCACGCAGTTGAAAATATAGCTTTATGAGAATGATATGATGCTGTTAAGGTAGATAACTTGTAATATAATGTTACGACAATGTACTTGATTTTTGATTAAAATCTTATAATTGATCTTTACCAAATTCAATTTAAAATATGAAGAGCATACATATGGATAAATACTTAGCTTGATTCCTTTGTATCTCGAGACTGAACAGGAATTGATATTGAGACTGAACAGGAATTGATATTCTAACTTGGAGGCCATATTTTTTGTGCAAAGAACATATATGCCGAGTAATGATTGTGTTTATTGGATATTTCAAGCATTTTTCGTCGATTTGGGTGAAATCATTGTGGAAATGATGATACATCTATACATTGGTTGATCATGTATAAAAGGCTGTATATTTGTATTTTTCTTTATTTTTCCCCTTAAAGTATAGAAGAGAAGAGAGAAACAGAACAAAAGCAAAGAGTAATTATTGTCATTAATTGTATTATTCTTAGCTTATGGGGGTTTTGTGGGTTTGATGCATCTTTCCTGCTTGTTTAAGATGTTATCATATAGATATCCCACGTTCTGAAAATGTTCCTTTTATTTTTGGTCTATGTATTTCGACAAACTTTTTGATTGTTGAAATTCTTTTAACTGTTTCAGCTTCCAGTTGCCGATACAAATACTGGTGTGTGTGAAGTCAAGTTTCAGGTGTCCAGGGAAACATTAGTTGCTGTACTACGATCAATGGACTATATACGTGAGCAACTATCGGTTCCTGTAAGTTGTTTATGGTAACCTAAACTAGTGCTACCTGATGTATCAATGTGTTTTTAATAGTGTGGTATCAACCATCCAACTTTAGTTTTCAATCAGGAAACTAAGGCTCTATTTTTTTATTATCACACTTGGGTGTTTTTTGTGTACGTAATGTTAATTTGTAGGCTAAAATTTGGCAGGGCGATGCACAAACAGAAGCTGCTATATTGAAAAGACCTCGGAAGTGA