Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00782 LG1 11159228 11161057 Protein ETHYLENE INSENSITIVE 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   ethylene-activated signaling pathway, defense response to bacterium, regulation of L-ascorbic acid biosynthetic process, histone acetylation, ethylene-activated signaling pathway, regulation of L-ascorbic acid biosynthetic process, response to hypoxia, histone acetylation, regulation of transcription, DNA-templated, ethylene-activated signaling pathway, regulation of transcription, DNA-templated, response to hypoxia, ethylene-activated signaling pathway, ethylene-activated signaling pathway, ethylene-activated signaling pathway, ethylene-activated signaling pathway, ethylene-activated signaling pathway, histone acetylation, response to ethylene, ethylene-activated signaling pathway, sugar mediated signaling pathway, ethylene-activated signaling pathway, regulation of L-ascorbic acid biosynthetic process, sugar mediated signaling pathway, defense response to bacterium, regulation of transcription, DNA-templated, ethylene-activated signaling pathway, ethylene-activated signaling pathway, regulation of L-ascorbic acid biosynthetic process, regulation of transcription, DNA-templated, ethylene-activated signaling pathway, ethylene-activated signaling pathway, response to ethylene, ethylene-activated signaling pathway, defense response to bacterium, sugar mediated signaling pathway, ethylene-activated signaling pathway
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, transcription cis-regulatory region binding, histone binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, transcription cis-regulatory region binding, chromatin binding, transcription cis-regulatory region binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein binding, protein binding, kinase binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, DNA binding, DNA-binding transcription factor activity, DNA binding, DNA-binding transcription factor activity
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
A/G 11159452 synonymous_variant p.Thr75Thr
G/A 11159479 synonymous_variant p.Gln84Gln
A/G 11159807 intron_variant
C/T 11160211 missense_variant p.Arg180Cys
T/C 11160244 missense_variant p.Cys191Arg
A/G 11160262 missense_variant p.Arg197Gly
T/C 11160541 missense_variant p.Trp290Arg
G/T 11161004 missense_variant p.Arg444Met
T/C 11161040 missense_variant p.Phe456Ser
G/A 11161042 missense_variant p.Asp457Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00782.1
MMMFEDIGFCGDLDLLSCPLGDEDVVAVRQTDPDPVVEDDYSDEEIDVDELEKRMWRDKVRHKRLKEQQKAKEGTDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGNGSMVINDCSEYDVDGAEEEPNFDVEDRKPDPLHPSNLGMERITGRLPLQISHPFKGDVVTNLDFIRKRKIPGDFNLMMDPKIYTCEHPQCPYNEPRLGFPDRSARDNHQLNCAYRNSASDYGGGSNFHDSEVKPVIFPQSFVQPNTKSQAANVVQPSFGVSGLGVPEDGQKMINDLMTIYDTNVIGNNNLSSNNFVAAENHNFSQTMLQQQQQDSRGDNYFTGQGMVTEGNYFAREEGQFERFKAMNMNAPFDTNHMLFSPQCDLSSFDFKDIQGGGMDTGHRQQQEVSIWFQ*


CDS Sequence:
>Vu_00782.1
ATGATGATGTTCGAGGACATTGGGTTTTGTGGCGATTTGGATTTGTTGAGTTGTCCCCTTGGGGACGAGGATGTTGTTGCTGTGAGACAAACGGATCCAGATCCTGTGGTTGAGGATGATTACAGTGATGAAGAAATTGATGTGGATGAGCTGGAGAAACGTATGTGGAGGGACAAAGTGCGGCACAAACGATTGAAAGAACAACAGAAGGCAAAGGAAGGGACAGATGCAGTGAAGCAAAGGCAATCCCAGGAGCAAGCTAGGAGGAAAAAGATGTCAAGAGCTCAGGATGGAATACTAAAGTACATGCTGAAGATGATGGAGGTCTGCAAAGCACAAGGGTTTGTTTATGGCATAATTCCTGAGAAAGGGAAGCCAGTGACTGGAGCATCTGATAATCTTCGCGAATGGTGGAAGGACAAGGTCAGGTTTGATCGAAATGGTCCTGCTGCTATAGCAAAGTATCAGGCTGATAATGCAATTCCAGGGAAGAATGATGGTAATGGCTCCATGGTCATCAACGATTGCAGTGAGTATGACGTTGATGGTGCTGAGGAAGAACCAAACTTTGATGTGGAAGACCGGAAGCCAGATCCTCTTCATCCATCTAATCTTGGGATGGAGAGAATCACCGGAAGACTACCACTACAAATTTCTCATCCATTTAAGGGAGATGTTGTCACAAACCTTGATTTCATCCGGAAGAGGAAGATTCCTGGTGACTTCAACCTCATGATGGATCCCAAAATCTATACTTGTGAGCATCCTCAATGCCCTTACAATGAACCTCGCCTTGGTTTCCCTGACAGGTCGGCTAGGGACAATCATCAACTGAACTGTGCATACAGAAACAGTGCTTCAGATTATGGTGGTGGTTCCAACTTCCATGATTCTGAGGTTAAGCCAGTCATATTCCCTCAGTCTTTTGTTCAACCCAACACTAAATCTCAGGCTGCAAATGTGGTTCAACCTTCATTTGGTGTATCTGGGCTTGGAGTTCCGGAAGATGGGCAAAAAATGATAAATGACCTTATGACAATATATGACACAAATGTTATAGGAAACAATAACTTAAGTTCCAACAACTTTGTAGCCGCAGAAAATCATAACTTTTCTCAGACCATGTTACAGCAACAGCAACAGGACAGTCGTGGTGACAATTATTTCACTGGCCAAGGAATGGTGACAGAAGGAAATTACTTTGCACGTGAGGAAGGACAATTTGAGAGGTTCAAAGCCATGAACATGAACGCCCCTTTTGACACCAACCACATGTTGTTTAGCCCCCAGTGTGATTTGTCGTCTTTTGATTTTAAGGATATACAAGGGGGAGGAATGGATACCGGTCACAGACAGCAGCAAGAGGTTTCGATTTGGTTCCAGTGA


Promoter Sequence:
>Vu_00782::LG1:11157228-11159228(+)
TTAAAAAGGAAGAGATGAGAAGTTGAAAAAAATGTTATAAAATTTTATTAAAAAGAGAAAATTTGTATTTGTATTTTGTTTATGGTGTTTAAAAAATAAATAAAATTAGTTAGTTTTTTTTAAAGTTATCATACACGGATACCACACATATAAAAAAAAGTAAAACAGAAGAATAAAATGAAAAATAAAACAGAAGCTTCATTAATCATATTCACACATTATATGACAATAAATGAATTAATAAATATTAATAAAAAATTAATGGGAGGTTGGGATGGGATTAACCTAACCTCTGTTATAAATGTATGTGGAAGTTCACTTTCTCCTCCAATTGAGGCTTTTTATCAATGTTTTAATCTTACCAATAATGAATGACACCCCACTTCACATTCACCAATGGCACCACCATCAGCAATAATAAATAAAACCAAGATAATGCTCACAACTCTGTCCCTTTTTCTTATTCACCATTTTCTCTCACCTTTCATCTTCCTACACTCTCCTTCTTCTTCTTCTTCCTCCTTTCTCTGCTTTTAGTCTATAAAAATTCTCTGTTTTTTCTTTACAAATTGACTTCTGTTCATCTTACAACTACACCAACTCCTGCTACTGGTAAGACCCCCCTCATGAAAAAAATTCTTTTTTTTTTTCACAATTCACTTTCTTCTTGATCTCTGCTTCGTCAATAGATTTCTGGGTCTTTCTTATTCTCCTTTTCCCTTTTCTTTTTGGGTTCTGTTTTTACTCTGTTGATTTGTTAAGTTTTAGTATTTTCATGATTTCTGATCTTTGGAAATATATATATGTATACAAGTATATCATGTTCTGTTCTGTGTTTACTGTTGCTATTTATGGTGTTGAGGGGTTTCCTGGCTGTTAGTTTGGCCTTAGATCCCGTGTTCATGACTGGTTTGATTGTTTCCTCTAATGGTTTGGGTGAGTAATATGTTTTTATATAACATGTCAATCGACTCTGTTTGATTATAGTTGATGAATGCTTTGTTTTTTTCTTTTCTAAATCATTTTTGAACTATGCTATGTGTTTTTGGTGTTTATATTTTCATTCTTATTTCGCGGTTGATTTGGATCTGTTCAATCAGGATAGTCCTGATCTAGTATCTGTTTTTGATGAATTGGGTTTTTTGATATAAACCATAATTTTGGTATTGCATTTAACTCGTATTTGGATGCAGCACTCTAATAGGGGAGTTTAATTTTTTAGGGGATTCAAATTTTTTCAGGAACATGCTCTGTTTGAAACTCCTCCAAAATAGTAGGAATTTTTTAAATTCATTACTCTCCTCCTTCATTCAGATCAGTAAGACACGTCCCAGACTCTCCCATAGTTGCAGGGTGTCAACTTTTTTACTTTTGATCTCTCTTTTTTATTCATCTAAATTCTTGTTTACTTTTATATATTTAATATATTAATATTCTTTTTACGTATCTAAGTTTTTGGATTTTATATTATTAAAGTATAAGTACTTATATATTCTTCTTATTATTAAAACATAGTTTTATCACACCTCTATTGAATCCCCATGGAAAAAAGTAATAATCCAAGAAAGTTACTTTATAATTGAATGGCTTTTGATTGTTTCAATTGATTTATTTGTATTTATTTTATTGGTGAATACTATAGAACTGATGACCTAGATGTGAAACGAACTCAATAGTCGTATCGATTCAACATAGGTGACAAATCGACTATGGAATTTTTGCTTATATAAAAAATATAGTGGATGAGAATGAGAGAAGAAATTTGTGGTCAAAATACATGCTTAATGAATCTTGTAAGATATTGCTACAGATTTTATGCTTTAGGTATCATGTGATCTTTGCACCGCCTCAATTGACAATTATTCCTTGTTTTTGGCTTTCAACAGTTGTAAAGTCGGTTTGTTATTCACTTCATCTGAAGCTGGTGGGTTGAATTGAACCCCTTTTCCTGGAGACTTGGTCTATCTTTGGGCTGTTTTTTTTCTTTTTCTGAGAAAAGA


Gene Sequence:
>Vu_00782(+)
ATGATGATGTTCGAGGACATTGGGTTTTGTGGCGATTTGGATTTGTTGAGTTGTCCCCTTGGGGACGAGGATGTTGTTGCTGTGAGACAAACGGATCCAGATCCTGTGGTTGAGGATGATTACAGTGATGAAGAAATTGATGTGGATGAGCTGGAGAAACGTATGTGGAGGGACAAAGTGCGGCACAAACGATTGAAAGAACAACAGAAGGCAAAGGAAGGGACAGATGCAGTGAAGCAAAGGCAATCCCAGGAGCAAGCTAGGAGGAAAAAGATGTCAAGAGCTCAGGATGGAATACTAAAGTACATGCTGAAGATGATGGAGGTCTGCAAAGCACAAGGGTTTGTTTATGGCATAATTCCTGAGAAAGGGAAGCCAGTGACTGGAGCATCTGATAATCTTCGCGAATGGTGGAAGGACAAGGTCAGGTTTGATCGAAATGGTCCTGCTGCTATAGCAAAGTATCAGGCTGATAATGCAATTCCAGGGAAGAATGATGGTTGCAATTCCATTGGTCCAACTCCACACACATTGCAGGAGTTACAGGACACAACACTGGGTTCTCTTCTGTCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGAAGGTTCCCATTAGAGAAGGGTGTTCCTCCACCATGGTGGCCCACTGGGAATGAAGTATGGTGGCCTCAAATTGGTCTTCCCAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGACCTCAAGAAGGCATGGAAGGTTGGTGTTCTTACTGCTGTCATCAAGCACATGTCTCCTGATATAGCCAAGATTCGGAAGCTTGTGAGACAGTCCAAATGCCTTCAGGACAAAATGACAGCAAAGGAGAGTGCAACATGGCTTGCCATCATCAACCAAGAGGAAGCCTTGGCTCGAGAGCTTTATCCTGATTATTGCCCCCCATTTTCCTCTGGTGGAGGTAATGGCTCCATGGTCATCAACGATTGCAGTGAGTATGACGTTGATGGTGCTGAGGAAGAACCAAACTTTGATGTGGAAGACCGGAAGCCAGATCCTCTTCATCCATCTAATCTTGGGATGGAGAGAATCACCGGAAGACTACCACTACAAATTTCTCATCCATTTAAGGGAGATGTTGTCACAAACCTTGATTTCATCCGGAAGAGGAAGATTCCTGGTGACTTCAACCTCATGATGGATCCCAAAATCTATACTTGTGAGCATCCTCAATGCCCTTACAATGAACCTCGCCTTGGTTTCCCTGACAGGTCGGCTAGGGACAATCATCAACTGAACTGTGCATACAGAAACAGTGCTTCAGATTATGGTGGTGGTTCCAACTTCCATGATTCTGAGGTTAAGCCAGTCATATTCCCTCAGTCTTTTGTTCAACCCAACACTAAATCTCAGGCTGCAAATGTGGTTCAACCTTCATTTGGTGTATCTGGGCTTGGAGTTCCGGAAGATGGGCAAAAAATGATAAATGACCTTATGACAATATATGACACAAATGTTATAGGAAACAATAACTTAAGTTCCAACAACTTTGTAGCCGCAGAAAATCATAACTTTTCTCAGACCATGTTACAGCAACAGCAACAGGACAGTCGTGGTGACAATTATTTCACTGGCCAAGGAATGGTGACAGAAGGAAATTACTTTGCACGTGAGGAAGGACAATTTGAGAGGTTCAAAGCCATGAACATGAACGCCCCTTTTGACACCAACCACATGTTGTTTAGCCCCCAGTGTGATTTGTCGTCTTTTGATTTTAAGGATATACAAGGGGGAGGAATGGATACCGGTCACAGACAGCAGCAAGAGGTTTCGATTTGGTTCCAGTGA