Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00794 LG1 11274226 11278444 PREDICTED: CBL-interacting serine/threonine-protein kinase 3-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, response to abscisic acid, response to cytokinin, protein phosphorylation, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, protein phosphorylation, protein phosphorylation, protein phosphorylation, response to abscisic acid, protein phosphorylation, signal transduction, response to cytokinin, protein phosphorylation
Cellular Component   located in   mitochondrion, cytoplasm, peroxisome, cytoplasm, nucleus, plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein binding
SNP Position Effect Amino acid change
G/C 11274242 stop_gained p.Ser386*
A/C 11274361 synonymous_variant p.Pro346Pro
C/G 11274411 upstream_gene_variant
T/C 11274444 upstream_gene_variant
A/G 11274472 upstream_gene_variant
T/C 11274586 upstream_gene_variant
C/G 11274614 upstream_gene_variant
C/T 11274637 upstream_gene_variant
G/C 11274864 missense_variant p.Ser295Cys
A/C 11275134 upstream_gene_variant
C/T 11275143 upstream_gene_variant
C/T 11275242 upstream_gene_variant
A/T 11275279 upstream_gene_variant
G/A 11275325 synonymous_variant p.Pro253Pro
G/A 11275326 missense_variant p.Pro253Leu
G/A 11275331 synonymous_variant p.Pro251Pro
G/A 11275345 stop_gained p.Arg247*
G/A 11275414 splice_region_variant&intron_variant
A/T 11275418 upstream_gene_variant
T/C 11275484 splice_region_variant&intron_variant
A/G 11275625 upstream_gene_variant
G/T 11275681 upstream_gene_variant
C/T 11275739 synonymous_variant p.Gly175Gly
C/A 11275835 upstream_gene_variant
A/G 11275855 upstream_gene_variant
C/A 11275890 upstream_gene_variant
G/A 11275945 upstream_gene_variant
C/T 11276031 upstream_gene_variant
T/A 11276051 upstream_gene_variant
A/G 11276188 upstream_gene_variant
A/G 11276254 upstream_gene_variant
T/C 11276282 upstream_gene_variant
T/A 11276303 upstream_gene_variant
C/G 11276317 upstream_gene_variant
A/G 11276383 upstream_gene_variant
G/A 11276426 missense_variant p.Ala159Val
A/G 11276505 upstream_gene_variant
T/G 11276509 upstream_gene_variant
G/T 11276524 upstream_gene_variant
C/T 11276548 upstream_gene_variant
G/A 11276587 upstream_gene_variant
A/C 11276788 upstream_gene_variant
A/G 11276801 upstream_gene_variant
A/C 11276959 downstream_gene_variant
G/A 11277020 synonymous_variant p.Gly95Gly
T/C 11277161 downstream_gene_variant
A/T 11277200 downstream_gene_variant
T/A 11277341 downstream_gene_variant
C/T 11277378 downstream_gene_variant
A/T 11277474 downstream_gene_variant
T/C 11277597 downstream_gene_variant
T/A 11277626 downstream_gene_variant
A/G 11277659 downstream_gene_variant
C/T 11277700 downstream_gene_variant
C/T 11277762 downstream_gene_variant
G/T 11277883 downstream_gene_variant
C/A 11277890 downstream_gene_variant
T/C 11278026 downstream_gene_variant
C/G 11278137 downstream_gene_variant
C/T 11278259 downstream_gene_variant
A/G 11278388 synonymous_variant p.Ile19Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00794.1
MSQPKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREVATMKLIKHPNVVRLYEVMGSKTKIYIVLEFVTGGELFDKIVNHGRMSENEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDTYGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDRGYDGATADLWSCGVILFVLVAGYLPFDDPNLMNLYKKISAAEFTCPPWLSFSARKLITRILDPDPTTRITIPEILDDEWFKKDYKPPVFEENGEINLDDVEAVFKDSEEHHVTEKKEEQPTSMNAFELISMSKGLNLENLFDTEQGFKRETRFTSKSPADEIINKIEEAAKPLGFDVQKKNYKASPSCPTYNELLCYSDSFI*


CDS Sequence:
>Vu_00794.1
ATGAGTCAGCCTAAGATCAAGCGCAGAGTTGGTAAATACGAGGTGGGGAGGACAATTGGTGAAGGTACATTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGACAGGAGAACCTGTGGCTCTTAAAATTCTTGACAAGGAGAAGGTGCTCAAGCACAAGATGGCTGAGCAGATCAGGAGAGAGGTGGCTACAATGAAATTAATCAAGCATCCAAATGTTGTTCGATTGTATGAGGTGATGGGAAGCAAGACAAAAATATATATTGTTTTGGAGTTTGTGACTGGCGGGGAGCTCTTTGACAAAATTGTAAACCATGGACGGATGAGTGAAAATGAAGCTCGTAGATATTTCCAACAGCTTATAAATGCTGTTGATTATTGCCACAGCAGGGGTGTCTACCACAGAGACCTGAAGCCAGAAAATTTGCTCTTAGATACTTATGGGAACCTTAAAGTTTCCGACTTTGGATTGAGTGCCCTCTCCCAGCAAGTTAGGGATGATGGGCTTCTCCATACTACATGTGGGACACCAAACTATGTTGCTCCAGAGGTCCTTAATGATAGAGGCTATGATGGTGCAACTGCAGACTTGTGGTCATGTGGGGTGATTCTCTTTGTATTGGTTGCAGGTTACCTACCTTTTGATGACCCTAATCTTATGAACCTGTATAAGAAAATCTCAGCTGCTGAATTTACTTGCCCCCCGTGGCTTTCTTTCAGTGCCAGGAAATTGATTACACGAATCTTGGATCCCGATCCCACAACTCGTATCACTATACCTGAGATTTTGGATGATGAATGGTTTAAGAAAGATTATAAGCCTCCTGTTTTTGAGGAGAATGGGGAAATCAACCTTGATGACGTTGAAGCTGTCTTTAAAGATTCTGAAGAGCACCATGTGACAGAGAAGAAAGAAGAGCAGCCAACATCCATGAATGCGTTTGAGTTAATTTCCATGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGATACAGAGCAGGGGTTCAAAAGGGAAACAAGATTCACGTCAAAGTCACCTGCAGATGAGATAATCAACAAGATTGAGGAGGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGGCAAGCCCTTCTTGTCCAACTTATAATGAGCTTCTCTGCTACTCAGATAGCTTTATATGA


Promoter Sequence:
>Vu_00794::LG1:11278444-11280444(-)
TCATGAATTCACCAGTTATACCAATAGCATGTTTTGATAAAAATGCTTTCAAAAATGCGTTTCACGAGAATGGTTAAAATAGCAATAATATAACCAAACGTTGTGCAACACTCCCAAGAAGAAGCAACCTGTCTTTGTCACAGTGGAATTATTGTTGTTATTTTATTTCCCTAACTAACCGAGAAACCAGAATTACTGCCAATGCTGTCGTGTTCTAATCGTTTCTCTAAAAAATCATTAAATAAATATCAATTTTAGAGAGGACAAACGAAGCTGTTCGATTCAATCCATCACTGTTATTTCTAAAAATTTGAAATTTATGGCAGTGGAAATGTGGCAAACCAAGTGGTTCTGTGATTTATGACCACAACAAATGATGTGAGTTTGTGGTTCAGACCAATCAACCCCAGAAATATTCTCTCTCTTCTTTTTATTTTCCACAAACATTTTTATTATTATTACTAGACATACATTCCATGGAAACAGATAAGCATTGATGAGTAACTGTTTGAAGTTGTTGTTCCCAGCATAAATAGCTGAAAATGCAAAACTACACACTCTCTTGAGTTCTGTCCGATTGCATAGCATTGGTTGGTAGTTGTCACAAAAATCTCTTGCCCTTTGGCCATAATCAAAAGCCGAGGCACTGTTCATCAAGCTAATCATCAAGCCAACCTTGCTTGGTTCCACTGCAGAATTTCAGTTATTCTTATCTCCATACATTAGATTGAAGTATTTCTTCTCCTCTCTCTCTACATATATATCTCCACTTTCCACGTTTTTTTGTTTTTTTATATCTTTATGTCTATCCTCTTCTCATACGAGCCTCAAGGTGTCCTATATATAACATACTTCCTCGTGCAGCTTTTGTGTTACTTGAATTTTGGAAACTTGATCTGCTTTTGCTTTGTTATTTCATTATCAGTACCCCTTTGGGTCGTATACTGGTTACCTGAACTGTCTTTTTGCTCATCTTTGAAGAACTATTTTAAAGTTCCCTTTTTTTTTTATACTTCTGTCTTTTCATTCATTTTATAAATCTCTCCATTCTTTCTTCAAAGTAAAATTCTGGGTTTGTTTTTTTGTTTTCAATTGGGGACACAGAAATTAAAGAACTGATTGGGATTTCCATTTTGTGTTGCTGGGTCTCTTAGATTTGAAGCTTTTTGGTTGGTGGATCCCAAATTCATGAATGCCCCCTTTTCTTCGACCAATAAGTTTTGTTGCTGAACAAATTAGCCCTGTCTGGCTAAGGTTTTTGAGTCTGTAGTGCTAGATAATTGATCTTTGTGTATTATTTTAACTTAAGGATCTTCAGTTTTCCCTTTTTATCATTGGTGGCTTTCTCACAAATCTAGTCTCCGAAGTTAGTGATTTCAAAGAGGTGCGCTGTGTTAACTTTCCTGTTTGTTTCATATTCAAGTTCAATTCTGGTTGTGGGTTTATCTTTTACTGGAAGACAAACTTTGAGGTTATTTCTCATCCCAACTATTGTTCTCTCTGCAACTTAAATCCAGCATCAATGGGTTTTAAATTTCTCGAAGATCTCTCCAGTTTACTTCATTACTAGAGAAAAGTGGGATCTCTGGGGTTACCTCATGTATGATTGATTTTTCCTGTTAGAACAGGGACCTTTAATCTTTAATGTGTGTGTTGAACATGAATTGAGAACTATTTCCTAGTTTTCATCTTCGACATTGAAACTATTGCTTTGTCTGTAAGATTTGATTTTTATGCGCTGTCATTTTACATTTACTCTTTACACTGTTAATCAATCAAAACCCCATCATAGTCTATAATTGGATTGATTCCAATGTAAATAGTCTTTCACAATGTACACACTATTTACTGTTGATTTAATCCATAAAAAAATGCAGCATTTCATAAACAATAAGATTTGGATGAAGATTCTTTTGGATAAAATATTGTTATAGGAACTAAATTCTGATATGCATTTCAGGTAGATTCCTCGTAGGTGCTCTCAAGTTCATTTGAAAAGA


Gene Sequence:
>Vu_00794(-)
ATGAGTCAGCCTAAGATCAAGCGCAGAGTTGGTAAATACGAGGTGGGGAGGACAATTGGTGAAGGTACATTTGCAAAGGTGAAATTTGCAAGGAACTCTGAGACAGGAGAACCTGTGGCTCTTAAAATTCTTGACAAGGAGAAGGTGCTCAAGCACAAGATGGCTGAGCAGGTTGAATACCTGAGGAACTTAACTTCGGATCTTACTCTGTCCTTAATCTTATTACTTCATTTAATTAGGAAACAAACAGTTTAATGACATAATGCTTCCTCTCATTTTCCAAAACCTTTCAAAATGTTGAGAAAGTGTAGTTTTCTGTGAACTATTTTTAGGTGGCAGGTTACAGAATTCAGATGTTTCTTATCATAGTACTGTTATTTACATCGGGTAGATGCTTTATAGATTCTGACAAAATTAAATCAAGTTTCTTAGATGTTTTTGATGTATTCTTTCAGATCAGGAGAGAGGTGGCTACAATGAAATTAATCAAGCATCCAAATGTTGTTCGATTGTATGAGGTCTCTCTTTCTCTCTCTGTGGACCACACATGCTATGATTTGCCATTCTCTTTTTTAAATAAATTTTTTCTTTATTTTATTCTTGCCTGAAGTTTCTGTTTTTAGAAGCAGCGTGTGGTAGTGGTTGAGTATAGAACGTTCTTGTTTGTTTCACTAAGAATTCTGCCTGCTGCCTACCATTCCAGAAATTCTTTATAAAGTATCCCGGTGAATAGTTAAAGTCATTGGATGTTTTGAAAGATTGTTTTTTTTTTTTAAAAAAAAACTTTGTTCATCTAATTCTGCTATGTTTGGATAAAGAGAAAAGAAAATACAGATAACATTCTTTTATGTAGTTGAAGGGAAAGTGCAAAGTAATAGTAGAAAAAGTTTACTTCTAGAAATAAAATTCAAACCTTTTACTTTTATCTCTTCTCCAATTCAAATTTTGAACTTTTATCTTCACTCTCATTTTCTTCCCACCCAGCCAAACGTAGGAAAAGTTCTAAATATGTTGAATGCTTGAATCTTCATTATGAAAAGAACTTTCCAATCTTCTGTTGCCGCTGGGTTTGATATATTCTTCTATCATGAATTGCCCATATGAAAAATTTTCTTACATGTGCAAAAGAAAAAAGTTGAGTTAGAATAAGTACGTGTAAAATACATTTCTCTTTCAATGTTATTTCATCTCTTTAACTCACCATTCTCAGTCTGTGATAATTAATTTACCGATGGTGTTGTTTTTGGTGTTTATCATCAAACATTCGTACCTACACAGAAATGATTTTCTTGGGAAGTATACATGCAATTAGAAATCAAAATAATTCTCATTTGTTGCGTGACTCTGTTTCTAATTTAACATTTTTGTTGACAGGTGATGGGAAGCAAGACAAAAATATATATTGTTTTGGAGTTTGTGACTGGCGGGGAGCTCTTTGACAAAATTGTGAGTATATAATCTTGTTGGTTTCCTTTCATTTTCATTTTATTCTACAATTTTGGAGAAAAAAGGATCAAAATGGTGACTCTTTAACATATATTTTCAGTCCACCAATCCTATTTAGCTTATGATACTAGATTAGTGTTGGATCACGAGAACATGATTCTTGTTCATTCATTCAACACATTATCATCATTCATTGGTTGTTGTGTATTGTATTGTCTTAGAATTAGATCATAGTACATTACATGGAAAAGTTGTTGTGTATGTTCCAATGGACATTTTGTTGTGAAGGTAAACCATGGACGGATGAGTGAAAATGAAGCTCGTAGATATTTCCAACAGCTTATAAATGCTGTTGATTATTGCCACAGCAGGGGTGTCTACCACAGAGACCTGAAGGTAAGGCTCCTTCACCTCACACATGCACACGTGCAAGTGTCACAAAATTATTTTGACATTAATATAATAAGAAATAACCTCTTACAATTAATGACTATCCACGTGCTTTCTGCAGCCAGAAAATTTGCTCTTAGATACTTATGGGAACCTTAAAGTTTCCGACTTTGGATTGAGTGCCCTCTCCCAGCAAGTTAGGGTAATCATGAATTTCATTGCCTTTTACCTTTAACTCTTTTTTTGTGTTTATCTTTGTTCTGTAAATTGATCTTGCTTTTTGAAGTAAAAGTATGACCCAATTTATTGATGTCATAGAAGAACATATAATGAAACAATTAGAAAGTATGAACATGTGTGTGAGAAATGGTGATAGTGAACTATATGTTCAGCAATTGCTGAAAGGAGATCTATGAAACATAGAAAGATACAACTTCCAACTACCTTTTAGCCTTTTTATCAGTGATAGGTTATTTATTTTGACCAGAGACATGATTTGATTTTTCTTGAATCAGGAGATTGTGCAAGTAACTAGTTATGATCTAGGAAGAGAAAGCATAATAGCATTAAAGAATGTGACATTATTGAAGTTGGAACAAACAATAGTCAACAGCATCGAAAAATTATATTCAATCATTCACTAATCACTCATAAATATTTAAACCCTTTTACTCACATTCATAACAGAAAAGGACACAGTTTTATACATTTTATAGTCGGATCCTGTCTAAGACACTGCTCTCTCTTTCCAGCTTGTCAATTGTTATAAATTTGAAGTTATTCTAAAATTGACAAAATTTTCTTGCATTTGAAGAGATTTTATTTATTTGTTCTTTATAGGATGATGGGCTTCTCCATACTACATGTGGGACACCAAACTATGTTGCTCCAGAGGTACAGACAAATGTCATGCTACTTAATTCTGAGCTGTGTACCAAAATTCATACATTTTTTTAGTCACTCTTCTAACTCTATACCCTTGTTGTATATAGGTCCTTAATGATAGAGGCTATGATGGTGCAACTGCAGACTTGTGGTCATGTGGGGTGATTCTCTTTGTATTGGTTGCAGGTTACCTACCTTTTGATGACCCTAATCTTATGAACCTGTATAAGAAAGTGAGCAACATTCAAACTTTACTGTACAATTTTAGTCTTCCCTTTGTTTACTCTCTGTTACATTTTATTTCTTGATCCACAGATCTCAGCTGCTGAATTTACTTGCCCCCCGTGGCTTTCTTTCAGTGCCAGGAAATTGATTACACGAATCTTGGATCCCGATCCCACAACTGTAAGGAGAAACATGTGATCATGTGCTTAATTATTGCCATGTAAAATTGCATGTTTGTTCTGAAAATAAAAGGACAGTTTTACACATAACCAACTTGTAACTTTGTACGCATCCTTGGTAGCTTCCAATGACCTGGTATCATCTACATCAGTTTGATTTCATAATTAACAAATGAGGATAATGGTTCTTCTAGAATAGCATTTAGCTAGTGCCCTGCACCACAATAAAATTGATATACAAAAGATAACTGGTCTTTAATATACAGTATTGTGGTTATTTTTTCTGTAACAGTTACATTTTGCTCTTGATTTCTGATTTACCCTGACTGTATGGCAGCGTATCACTATACCTGAGATTTTGGATGATGAATGGTTTAAGAAAGATTATAAGCCTCCTGTTTTTGAGGAGAATGGGGAAATCAACCTTGATGACGTTGAAGCTGTCTTTAAAGATTCTGAAGTAAGTTGAAGATTACTAGATGTCATTTTTGTATTCATTTTCTGAGTTCTGGAATCTTTCCTCAAAGAATTTTGCCTGCATATTCAGGAGCACCATGTGACAGAGAAGAAAGAAGAGCAGCCAACATCCATGAATGCGTTTGAGTTAATTTCCATGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGATACAGAGCAGGTACACATCTTCACATGATCAGATGCTTTTTAAATCATTTCATTATTGTGATGAACATGTAGAATTCAAATACAGAGAAAACATGCAAGTCACTACAATTTTGGCTTAAACTAATTTATTTATCTTATACAACCAAGTTTTTTATGTTGAAAGTTTAACTTAATTTGGGTGAGAGCTTTCTTTTTCAAGTCAAATTTGGCATATTATGAGATACCTTACTAAATTTACCATGTTTTCTTTATTCTTATGTGATTGACATCAGGGGTTCAAAAGGGAAACAAGATTCACGTCAAAGTCACCTGCAGATGAGATAATCAACAAGATTGAGGAGGCTGCAAAACCTCTTGGCTTTGATGTGCAGAAGAAAAATTACAAGGCAAGCCCTTCTTGTCCAACTTATAATGAGCTTCTCTGCTACTCAGATAGCTTTATATGA