Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00807 LG1 11398559 11400211 PREDICTED: dr1-associated corepressor-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to light stimulus, negative regulation of cellular biosynthetic process, vegetative to reproductive phase transition of meristem, shoot system development, regulation of developmental process, vegetative to reproductive phase transition of meristem, photoperiodism, negative regulation of cellular biosynthetic process, vegetative to reproductive phase transition of meristem, vegetative to reproductive phase transition of meristem, shoot system development, regulation of reproductive process, negative regulation of cellular biosynthetic process
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein heterodimerization activity, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, protein binding
Pathway   B 09182 Protein families: genetic information processing   C 03021 Transcription machinery [BR:ko03021]
SNP Position Effect Amino acid change
G/T 11398585 missense_variant p.Lys9Asn
T/A 11398593 missense_variant p.Met12Lys
G/T 11398594 missense_variant p.Met12Ile
T/C 11398619 splice_region_variant&intron_variant
C/A 11398631 downstream_gene_variant
G/A 11398651 downstream_gene_variant
T/A 11398654 downstream_gene_variant
G/T 11398666 downstream_gene_variant
T/G 11398690 downstream_gene_variant
G/C 11398693 downstream_gene_variant
T/G 11398694 downstream_gene_variant
G/A,T 11398705 downstream_gene_variant
G/T 11398711 downstream_gene_variant
G/A 11398718 downstream_gene_variant
A/G 11398719 downstream_gene_variant
G/A 11398803 synonymous_variant p.Glu38Glu
C/A 11398850 downstream_gene_variant
T/C 11398996 downstream_gene_variant
A/C 11399076 downstream_gene_variant
C/T 11399085 downstream_gene_variant
C/T 11399124 downstream_gene_variant
G/T 11399142 downstream_gene_variant
C/T 11399182 downstream_gene_variant
T/A 11399277 synonymous_variant p.Val74Val
G/A 11399415 missense_variant p.Ala96Thr
G/T 11399422 missense_variant p.Arg98Met
G/C 11399423 missense_variant p.Arg98Ser
C/T 11399428 missense_variant p.Pro100Leu
A/G 11399466 downstream_gene_variant
C/T 11399523 downstream_gene_variant
A/G 11399563 downstream_gene_variant
T/C 11399629 downstream_gene_variant
A/G 11399718 downstream_gene_variant
G/A 11399739 downstream_gene_variant
G/A 11399752 splice_region_variant&synonymous_variant p.Arg105Arg
A/C 11399757 missense_variant p.Gln107Pro
T/C 11399887 synonymous_variant p.Asn150Asn
A/G 11399890 synonymous_variant p.Glu151Glu
A/G 11399911 synonymous_variant p.Glu158Glu
A/T 11400070 synonymous_variant p.Ala211Ala
T/C 11400091 synonymous_variant p.His218His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00807.1
MQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVANCDDHTVKRRKVAEDDNDSHQEPKRNNKAEQGQTSGRGRGRGRGRGRGRGNRNVDQEMNSQAKCAEDSDALKQNEKQTQSNESMENASSPEEVKQTFPVSKPAQVSIRNFDLNMDPDENMESLTSPTAVPTSSSAKSEEKHHEEYPGWSLSDMEKMTIDPIQLANINGRIDEDEEDYDEEM*


CDS Sequence:
>Vu_00807.1
ATGCAAGCTGATGAGGATGTAGGGAAGATTGCAATGGCTGTGCCTCTTTTAGTTTCTAAAGCACTTGAGCTATTTCTACAAGATTTGTGTGATCGAACATATGAGATAACTCTGAGGAGGGGAGCTAAGACTATGAATGCTTTTCATTTAAAACAGTGTGTGCAGACTTTTAACGTCTTTGACTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGCGGTTCTGTAGCAAATTGCGATGACCATACTGTCAAGAGGAGGAAAGTTGCTGAAGATGATAATGATAGCCACCAGGAGCCCAAGAGAAATAACAAGGCGGAGCAGGGACAAACCAGTGGCAGAGGAAGGGGTAGGGGCAGAGGAAGGGGTCGTGGCCGTGGAAATAGAAATGTAGATCAAGAGATGAATTCACAAGCCAAGTGTGCAGAAGATTCTGATGCATTGAAGCAAAATGAAAAGCAGACTCAAAGCAATGAAAGCATGGAAAACGCGTCATCACCTGAAGAAGTTAAGCAGACTTTTCCAGTTAGCAAGCCGGCTCAGGTGTCCATTCGAAATTTTGACTTAAACATGGACCCAGATGAGAATATGGAATCGTTAACATCACCAACTGCTGTTCCAACTAGTTCATCAGCAAAATCAGAAGAGAAACATCATGAGGAATATCCTGGATGGTCCTTGTCTGATATGGAAAAAATGACCATTGATCCCATTCAACTAGCTAACATAAATGGAAGGATTGATGAAGATGAAGAGGATTATGATGAAGAAATGTAA


Promoter Sequence:
>Vu_00807::LG1:11396559-11398559(+)
AAATATATTATATTAAAAAAATGTTAAGATAAGTATTCTAATTTAAATCTTTGGAAAATTAGGTTAAATTTGAGATTAGAAGAAAATAAAATTAGTGTTTTAGAATATGAATGAATGGTGAATGTGAAAAGTTTGAAACAGTGTGAACCGTAGAGTACTCCTAAATTAGCGCTTCGTGGAAGGGGGAAACGCTCCAAACCCAAACACACGACAAAACAAAAATAAAAATATAGTTGTTTTCCCACTTTGTTTCTTCGTCTTCTTCAACATTAATCTTGTTTTCTTCCCTTTTATAAAAAGTAAAGTGGGGTTTGGTCGTCTTCTCCAACCGTTTTTTCTATTCACAGCATGAGGAAAAAACTGGATACTCGTTTCCCTGCGGTAAGTTCTCTCTCTCACTTTGTTTCTTCATGTTGAAAAGATTGTTCTGTGTTGTTTTCATTCTATATTTACTATTTTTATTTTGTCATTGGGCTCGTTTTGTTTTCTTGTGTAAAATGGTGTTTTGGGTGACATAGGAGATGGGTTTCTCTTGGTTTTGGATGTTCTGTGGTTCATGTTTTGACGGGCCGAATGCTCTGTATTAACACTCAGGCTTTAGAATTGTTTGGCCTTGAATTGTTGTTATGTTAATGAATTATTTTTTAAAGTGAATGTTTTGCTGGTGAATATTGTTTTAGGATTTGTGCCCATTGGACGTTAGTTATTTTGGATGGTATAAGTTTTCTTTCCCAAAGACAAAGAAACACAACCACCCATCTTGCACATTTGTTCTTTCTACCATTTTTTTTCTATCTGAAAGTCTTGATTCCGGGAAATCTTAAGGAATACAAACATAGTTGTAGTTCTGTTGAACAAATTATTTGCTGTTTTTTATGTAGTGCAATGTATTCAATGAGGTAGAAAAAATTGTTTTGAAGGAGTGATTGGTGCACATCTTAATTCTTCTTTATTATGGCTGTCTTAACTGAGGTTTCTTGGTGTAATTTCTTTTTCGTTTTATTGTCTACCTACTTTGGACATGGGTGTTGCCCACGTGCTTTGATTTGGTTGTGGAATATCATTTATCGATTTTAGGATGTAAACCTTTATCTTTATTTTGGCACTGCTTTATGTCATATTTTGTGTATTGGAAACTAGGACAGAATGTTATTTGTAGTATTTATTCCCCTTCTAACCTTTTTCCAAATTTGGTATTACATGTCTATTTAAAAGAATTCCCTGAATTTGGTACCCCTCAAGCAATGGTATTTTTTTGAAGGGATTGTTTATTCCTTTGTAAAAGCCACTGCTTTCCAAGTATTTTCTATACTATAATTTTTGAGGATTGCATATCACATATCAATATCATACATTCTTAAACAGAGTCCAACATTGCCATCAGTTACAACAGAAGTCTTTTCCTGCTAGTTGTGGTGGAATATGAATCAAACGAAGCTTCAATCTCCTATTATAAGTCATGTCCATATGCTAATAAAATCATTTAAATATAAACATAGATTTTCTTGATCACTCCCTTTTTCTCACTATGGGACTACCCTCCATCTTATGTACTTTTTTTATCTGGATTCTATAGCTTTTCTCCCACACGCCTAAACCTTCTTCATGTGGGAGATAGACTCGTTGGTGTTTTGTGGCCCACCATGTTTTCTTACACTACTGTTGACCCCCTTGTACGTATTTTTGATTGATCAATTATGTACAATACTTGCTTAACTTTTGAACTCTTACTCTTTACTTCTTTTAGAAGGGTAGTGGTGGAATTTGAGCATTGGTTACTGTTGGTGGGGTAGGACAACCACAGTTTTTTCCCCATTAGGCAACTTATTTATTTAGTTTCTTTTAGTTGAAAATTTTGCTCTTCATTCGTTGAGGTGGAATTTCCTTATTTGAATTAACTGAATGCTCTTCTATCTTCCAGGATTTGGTTTTAGTCATTTCAGTAATAATTGTGTTATCTTATAGAATTGGTATTTGACAGGCCAGGATTAAGAAAATTA


Gene Sequence:
>Vu_00807(+)
ATGCAAGCTGATGAGGATGTAGGGAAGATTGCAATGGCTGTGCCTCTTTTAGTTTGTAAGTAATTTTTCATGCATATTCTATTTTTCCTTTTGTCTTCCTCAAACATGATTTACTTTTGGGCTTTTGGGAGTTTGTGATATGAATAGTCTCTGATTTGTGATGATTCATGTTTATGCGTTGCAGCTAAAGCACTTGAGCTATTTCTACAAGATTTGTGTGATCGAACATATGAGATAACTCTGAGGAGGGGAGCTAAGACTATGAATGCTTTTCATTTGTAAGTGAAATTCCTATTTTTTATAGTTTCAAATTCGTCTTTTTCAAGTCTGTACAAAGTGGTTACAACTTTTACAAATCCTGCACGTTTCTTTGGTTTTGGAAATATGGTTATGAGAACATCACATCAGGTCTAAATTTCTAATGATAATATGCTCAGTCTCATTTTAATGTCTTAGGATTCTTCTACAGATTTAATATTTCATTGTGAGTGACATTAAATTCCCTGTTCTGCCTAACATGATTAAACATATTAATGACATCCATGGAAGAAAATGTTAAGGTGGTCTTGCTTTTGGAACACATGCTTTTTACCTTCTCTTTCTGGTTTCTAAAAGGTTTACTTCCATCCTTTGCATTTGCAGAAAACAGTGTGTGCAGACTTTTAACGTCTTTGACTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATTTAGGCGGTTCTGTAGCAAATTGCGATGACCATACTGTCAAGAGGAGGTTTGTGCTTTGGTTAATACTATTGTTAGCGGGAACTAGTTTCAGTATGCTGAGTTATGTCTATTTTATATTAGGAAAGTTGCTGAAGATGATAATGATAGCCACCAGGAGCCCAAGAGAAATAACAAGGTTTTTCAACTGTATTCTATTAACTTCAGAAGTTAGCATAATTTTTCTTGTGATTACACCTTTTGCCGACTAATTATCACCCACACTGAACTTTTTTTCTGGTTACAAAAGAATTTACTATAGTCATTAGGAAACTTCACTAAGTGGCTGGCTAATGAATTCAACTACATATAGTCTTTAAAACTTTATGAAAGTTTTTGGTGAAAAGTGTTGTTGTAATTGAGCAAACAATAGAATAGCACCTAATCTGGAAATTATAGCTAAATGTTATCTGAATAATGATTTTTTTTTTCATGATTTGAATAGGCGGAGCAGGGACAAACCAGTGGCAGAGGAAGGGGTAGGGGCAGAGGAAGGGGTCGTGGCCGTGGAAATAGAAATGTAGATCAAGAGATGAATTCACAAGCCAAGTGTGCAGAAGATTCTGATGCATTGAAGCAAAATGAAAAGCAGACTCAAAGCAATGAAAGCATGGAAAACGCGTCATCACCTGAAGAAGTTAAGCAGACTTTTCCAGTTAGCAAGCCGGCTCAGGTGTCCATTCGAAATTTTGACTTAAACATGGACCCAGATGAGAATATGGAATCGTTAACATCACCAACTGCTGTTCCAACTAGTTCATCAGCAAAATCAGAAGAGAAACATCATGAGGAATATCCTGGATGGTCCTTGTCTGATATGGAAAAAATGACCATTGATCCCATTCAACTAGCTAACATAAATGGAAGGATTGATGAAGATGAAGAGGATTATGATGAAGAAATGTAA