Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00836 LG1 11723123 11725920 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, protein autophosphorylation, regulation of pollen tube growth, regulation of pollen tube growth, regulation of pollen tube growth, regulation of pollen tube growth, protein autophosphorylation, peptidyl-serine phosphorylation, regulation of pollen tube growth, regulation of pollen tube growth, regulation of pollen tube growth, protein autophosphorylation, peptidyl-serine phosphorylation, peptidyl-serine phosphorylation, protein autophosphorylation, regulation of pollen tube growth, protein autophosphorylation, intracellular signal transduction
Cellular Component   is active in   nucleus, cytoplasm
Cellular Component   located in   plasma membrane, cytoplasm, plasma membrane
Molecular Function   enables   calmodulin-dependent protein kinase activity, calmodulin binding, calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity, calcium-dependent protein serine/threonine kinase activity, calcium ion binding, protein serine/threonine kinase activity
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
C/G 11723211 downstream_gene_variant
T/C 11723459 downstream_gene_variant
G/T 11723500 downstream_gene_variant
A/G 11723562 downstream_gene_variant
A/C 11723624 missense_variant p.Leu484Trp
G/A 11723675 missense_variant p.Ser467Leu
C/G 11723808 splice_region_variant&intron_variant
G/A 11723867 synonymous_variant p.Asn437Asn
A/T 11723946 splice_region_variant&intron_variant
C/T 11724052 synonymous_variant p.Lys407Lys
G/A 11724103 synonymous_variant p.Leu390Leu
G/T 11724124 synonymous_variant p.Gly383Gly
G/A 11724127 synonymous_variant p.Ser382Ser
G/A 11724234 downstream_gene_variant
G/C 11724288 downstream_gene_variant
G/C 11724485 downstream_gene_variant
T/A 11724560 downstream_gene_variant
C/T 11724624 missense_variant p.Glu300Lys
G/T 11724741 downstream_gene_variant
G/C 11725045 downstream_gene_variant
G/A 11725086 downstream_gene_variant
C/T 11725100 downstream_gene_variant
C/T 11725102 downstream_gene_variant
C/A 11725107 downstream_gene_variant
A/T 11725141 downstream_gene_variant
C/A 11725146 downstream_gene_variant
T/C 11725185 downstream_gene_variant
G/A 11725192 downstream_gene_variant
T/G 11725202 downstream_gene_variant
G/T 11725327 synonymous_variant p.Ser198Ser
G/A 11725381 synonymous_variant p.Cys180Cys
A/T 11725420 synonymous_variant p.Ala167Ala
G/A 11725480 synonymous_variant p.Ala147Ala
T/C 11725588 synonymous_variant p.Lys111Lys
T/A 11725846 missense_variant p.Gln25His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00836.1
MGNCCSGGTNDSENKGETNQQNDNQGGTATTPPQSKPNHPPTKHSKPAPIGPVLGRPMEDVRSTYSMGKELGRGQFGVTHLCTHKSTGKQYACKTIAKRKLVNKEDIEDVKREVQIMHHLSGQPNIVELVSVFEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLSSKEENAPLKATDFGLSVFYKQGELFKDIVGSAYYIAPEVLKRKYGPEVDIWSIGVMLYILLSGVPPFWAESENGIFKAILRGHIDFTSDPWPSISPAAKDLVRKMLNSDPRQRLTAYEVLNHPWIKEDGEAPDKPLDNAVLNRLKQFRAMNEFKKVALRVIAGCLSEEEIMGLKQMFKGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNKEDHLYTAFQYFDKDNSGYITIEELEQALIEFNMHDGRDIKDIISEVDADNDGRINYDEFAAMMNKGNLEVNTKKRHADKRVKYQGELWCMTAVWLGLRI*


CDS Sequence:
>Vu_00836.1
ATGGGCAACTGTTGCTCAGGTGGCACCAATGATTCTGAAAACAAGGGAGAAACCAACCAACAAAACGACAACCAAGGGGGAACGGCAACCACCCCTCCACAATCTAAGCCTAACCATCCTCCCACCAAGCACTCCAAGCCTGCCCCCATTGGGCCTGTTCTTGGAAGGCCCATGGAGGATGTTAGAAGTACTTACAGCATGGGGAAAGAGCTGGGGAGAGGCCAGTTTGGTGTCACACATTTGTGCACACACAAGAGCACAGGAAAGCAATATGCCTGCAAAACCATTGCCAAGAGAAAGCTGGTTAATAAGGAGGACATTGAGGATGTGAAAAGGGAGGTCCAGATCATGCACCATCTCTCAGGGCAGCCCAACATTGTGGAGCTTGTCAGTGTTTTTGAAGACAAACAATCTGTTCATTTGGTTATGGAGTTGTGTGCCGGGGGTGAGCTCTTTGATCGCATCATTGCAAAGGGACATTACACTGAACGTGCAGCAGCTTCCCTCTTGAGAACCATCGTGCAGATTGTCCACACCTGCCATTCCATGGGAGTCATTCACAGAGATCTTAAGCCTGAAAATTTCCTTCTCTCCAGCAAGGAGGAAAATGCACCTCTCAAGGCAACCGATTTCGGTTTATCAGTTTTTTACAAGCAAGGAGAATTGTTTAAGGACATTGTTGGAAGCGCATATTACATTGCACCAGAGGTCTTGAAGAGGAAATATGGTCCAGAAGTTGACATTTGGAGTATTGGTGTCATGCTATACATTCTTCTATCTGGTGTTCCACCATTTTGGGCAGAATCCGAAAATGGAATATTCAAGGCAATTCTGCGAGGTCATATTGACTTTACAAGCGATCCATGGCCATCCATTTCGCCTGCAGCAAAAGATCTCGTGAGGAAAATGTTGAATTCGGACCCCAGACAGAGGCTGACAGCGTACGAAGTTCTGAATCACCCATGGATCAAGGAGGATGGAGAAGCACCAGATAAACCTCTTGACAACGCAGTACTGAATAGGCTCAAGCAGTTCAGAGCAATGAACGAATTCAAGAAAGTTGCTCTAAGGGTCATCGCGGGCTGCCTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTCAAGGGGATGGACACTGACAACAGCGGCACCATTACAATTGAAGAGCTCAAACAAGGGCTTGCAAAACAAGGGACCAAGCTAACAGAACAAGAAGTCAAGCAATTAATGGAAGCCGCAGATGCCGATGGCAATGGAACCATTGATTACGATGAATTCATCACAGCAACAATGCACATGAACCGCATGAACAAAGAAGATCATCTTTATACTGCCTTCCAATACTTTGACAAAGATAACAGCGGGTACATTACCATTGAAGAACTAGAACAGGCTCTTATCGAGTTCAACATGCACGATGGTAGGGACATCAAGGATATCATTTCAGAAGTTGATGCAGATAATGATGGCCGGATTAACTACGATGAATTTGCTGCAATGATGAACAAAGGAAACCTAGAAGTTAATACCAAGAAGAGGCATGCTGATAAGCGAGTGAAATATCAAGGAGAGTTGTGGTGCATGACCGCTGTTTGGTTGGGACTGAGGATTTAA


Promoter Sequence:
>Vu_00836::LG1:11725920-11727920(-)
ACAAAAACTACTTTGATAAATATAAATGAAAAAATAATAGAATATAAATTTATGTATTAACGAGTGGTTGGTTATGCTTTTTAATTAAGTTTTTTATATCTTCTATACTAACTACCTTAAAAGGGTAAAATTGAAACAATAAAATAAAATATGCATATAGTTATGCGTATAATTATTTTAAAAGGTTTTGTTAGTTATTTTATTTTTTTTTCATAAGTTTTTTATTATAATTATTTATTATTTCAAAGTTGATAACTTGATCATTGTTGTTAAAAAATGTTTGAACTTTAATTTGTCTGTTTTTCAAATAATTTAGTTTGAAACTTTAATTTTTAATTAATATATTTATAATAATATTTGATTAAAAAGGATAAATACTTTAATTGTACAAATATAAAATAATGATTCGAGTGATGATTTTATTGTAATAAATATATGAAGTAAATTAAAAGAACAAAAAATTCTGAAATGATAATCTGTTAAATTGAATTGACTTACAAAATTTTTAAATCATCAAAGTGAATTGGATCGACTCACTTAAAAGTTTATAGGAGAATGTTTGAATTTGAAAATAAATCAAGTTGAAAATTTGTCATATTTGTAAGTATTAGGAGATTAGTTTTTGTTTATTTTTCTTTGCTAAATTGACAAATATATATAGATTAATATATATTTGTAATTTTGTAACAATTTTTTTAAAATAACCTATTTTAACAAATTAATTTGTTATTATTAAATTACACATAAAAAAGTAGATGAAAGATACACTATAGTGAATAGACATAACAAATTACATTAAAAACTTTATATAATTTAATCAAAATGACAATTTAATTCCAAAGTAATTGTAAATTACAATAACAAAACGTGTAACAATCACGTTGTAAAAAAGTTAACGCACTACTAAAAACATAATAAATAATCATCTCAAAATATTAATATATAATGTTATTATTGTTATTATAAACATAAATAATACACAATAATCTATTAAAAAAATGAAACATAGAAACTAATTAATTTTTTTAAATCAATTATGATATAACTCTTCTGTTTAAATACTTAAAAAATAATAATCAAATTTCTTTAATCAAAATTTTATTTTTTTAATACAATACAAAAATTTAAATATTATTTTTTAACTTTTAATCACACAAATATTAATTTCAATTATTTATTTATCCAAAATCATAAAAACCAATTCTTAAATACATAGTCATACACCAATTTAACTATTGTTATACATTTCAACATGCAACAAATCTACATGTAAAAATATTTTAACAAAGATTACCGTATATTAATTTTTAACTTCTATATCAAACCTATATATTATATATAATTATAATAATAAAATATACACATTTTAAATTTATTTATACAAATATAATAATAATGATATTGTTTTCTTAAAAAAGTTTTTTAAAAGAAAAAGTCCAGAAGTGCACAGGGATGTCATGGTAGTTTAATAGAATTGGTGTGAGATGATGATTTATCTGTAAAAAGAGTTGAAGAATGTAAAAATGGAAGTAAAAACAGAAAGAGTGATGTGATGAGAGTTGTATTGTATTGTTGGAGACTTGTTGAGACTTGGAAAAGGGAAAAGCATTTTTATAATTACAGATGTAAAACAGCAAAATCCATTTTTATTATTACCTGTTCCGAGAAATGCTGGCCACCATTGTCTGAATAAAAAAGTCAGCCTTTTCCAAAGGAAGAGACAAGCCAAAGACTCTTAATTTGCTCCCTCTAATTCTCTTCACCAACACCCCTTTTAACACCCTTTCAAATTTCCCCATACCTTTTTTTTAGACAATTTTTTTTACCTCTTTTCCAACAACAGACACTTCCCCTCCCTAATGCTAACACCTTCTCTCCAGAAAACAAATACAACATAATTTTTCAGCCCTCAAATCACACCACCTTCACCTATATCTATCAACTCACATCCTTTCCTTTCCCTCCACCCCTTTTGTTCCTGTTCTCCCTTCCATTCCACC


Gene Sequence:
>Vu_00836(-)
ATGGGCAACTGTTGCTCAGGTGGCACCAATGATTCTGAAAACAAGGGAGAAACCAACCAACAAAACGACAACCAAGGGGGAACGGCAACCACCCCTCCACAATCTAAGCCTAACCATCCTCCCACCAAGCACTCCAAGCCTGCCCCCATTGGGCCTGTTCTTGGAAGGCCCATGGAGGATGTTAGAAGTACTTACAGCATGGGGAAAGAGCTGGGGAGAGGCCAGTTTGGTGTCACACATTTGTGCACACACAAGAGCACAGGAAAGCAATATGCCTGCAAAACCATTGCCAAGAGAAAGCTGGTTAATAAGGAGGACATTGAGGATGTGAAAAGGGAGGTCCAGATCATGCACCATCTCTCAGGGCAGCCCAACATTGTGGAGCTTGTCAGTGTTTTTGAAGACAAACAATCTGTTCATTTGGTTATGGAGTTGTGTGCCGGGGGTGAGCTCTTTGATCGCATCATTGCAAAGGGACATTACACTGAACGTGCAGCAGCTTCCCTCTTGAGAACCATCGTGCAGATTGTCCACACCTGCCATTCCATGGGAGTCATTCACAGAGATCTTAAGCCTGAAAATTTCCTTCTCTCCAGCAAGGAGGAAAATGCACCTCTCAAGGCAACCGATTTCGGTTTATCAGTTTTTTACAAGCAAGGTAAATAATCATCATCATCTCACCCTTCTCTCTTCTTCTGCTTCTCTTTCAATTCTTATCAGCTTTCATTCAATTCAATTTCTGGGATCTCTGTAACAATTGTTTCTGGGATCTCTGAGATTATATATATCAGTCACATTTATCTGTAATATTAAGAATCGTGACAAAACCATAATCATGACTGTAATTTAAAACCTGCGTAACAAATGTGGATAAACAACTCACATCACCTGTGCCTCGTCTTGATAGAACTTCTGTTTGGGAAGATTTCTGCTAAACAATGGAATCCTTTTGACAGGAGAATTGTTTAAGGACATTGTTGGAAGCGCATATTACATTGCACCAGAGGTCTTGAAGAGGAAATATGGTCCAGAAGTTGACATTTGGAGTATTGGTGTCATGCTATACATTCTTCTATCTGGTGTTCCACCATTTTGGGCAGGTTATATTCTTTCACTCAATCATAAAGCTACCTCTAGAAAACACTATAAAATCGATCGTATATCTGCATGACACTGAAACCAAAACATGATTTTGACAGAATCCGAAAATGGAATATTCAAGGCAATTCTGCGAGGTCATATTGACTTTACAAGCGATCCATGGCCATCCATTTCGCCTGCAGCAAAAGATCTCGTGAGGAAAATGTTGAATTCGGACCCCAGACAGAGGCTGACAGCGTACGAAGTTCTGAGTAAGTGTAACACTAGCTTACTTTCTAAGAAAAACTTGAACTTAACGACGAATTAATGGTTTGAAAATTAATTTTACTTTAGCCTCAACATGATTAGTTCTAATGTGAAAAACAGATCACCCATGGATCAAGGAGGATGGAGAAGCACCAGATAAACCTCTTGACAACGCAGTACTGAATAGGCTCAAGCAGTTCAGAGCAATGAACGAATTCAAGAAAGTTGCTCTAAGGGTAATAATTCATTCTATTTAGGCTTTCTCGCCATTCTTTGTTAATAAATCAATCAATGGTTTGGTTAGAGATGGCAAAAACAAAACTACCTGGTCTGTATTTTCCACTGATTCGCATATGAATACGAATATAGGTCATCGCGGGCTGCCTATCAGAGGAAGAAATCATGGGATTGAAGCAGATGTTCAAGGGGATGGACACTGACAACAGCGGCACCATTACAATTGAAGAGCTCAAACAAGGGCTTGCAAAACAAGGGACCAAGCTAACAGAACAAGAAGTCAAGCAATTAATGGAAGCCGTAAGTTCTCTCTCCTTTTCTAAGTATTGCATCAGAAAACAAGTTCTTCCCAATGCCATTACTCAAACCATTTTCTTTACTTCTGCATACTACAGGCAGATGCCGATGGCAATGGAACCATTGATTACGATGAATTCATCACAGCAACAATGCACATGAACCGCATGAACAAAGAAGATCATCTTTATACTGCCTTCCAATACTTTGACAAAGATAACAGCGGGTAAAGACAAAAAATATCAACTAGACTTCAATATTTATCAGTCATCCCTTCGGAAATTGATTGGTGTTAAACGTTCTAATCTCATTGTTTTGTCATAATTAGGTACATTACCATTGAAGAACTAGAACAGGCTCTTATCGAGTTCAACATGCACGATGGTAGGGACATCAAGGATATCATTTCAGAAGTTGATGCAGATAATGTAAGTTTTTCTTCACTCAACGACTTCAATATGCTAATACATATAACTTTAAATAAAAACCGAGACACAATTATGTCATTTCTAAATAATTCCAATCTATAATAGTGAATTCAAGAGAATGTTATTAGCACTTCTATAGTTCCAATTCAACTAACTTTCTATCACATATGCGGTTAACAACTAGCATACTCTTGTGATACAGCACATCTGAATTACGATTAAGAAAATTTATGAAAAAATTGTCATTGCAGGATGGCCGGATTAACTACGATGAATTTGCTGCAATGATGAACAAAGGAAACCTAGAAGTTAATACCAAGAAGAGGCGTGATTCAACCTTATATTAGTTGGGGATTATACAAATATTTAAAAGGCATCATGGCCTCTTTAGGTCCTGTGTGATTGGTTGGTGCAGATGCTGATAAGCGAGTGAAATATCAAGGAGAGTTGTGGTGCATGACCGCTGTTTGGTTGGGACTGAGGATTTAA