Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00863 LG1 12025041 12027009 PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of cell differentiation, maintenance of root meristem identity, maintenance of root meristem identity, phloem development, floral organ development, regulation of meristem growth, regulation of cell differentiation, protein phosphorylation, floral organ development, protein phosphorylation, floral organ development, hormone-mediated signaling pathway, hormone-mediated signaling pathway, regulation of meristem growth, hormone-mediated signaling pathway, maintenance of root meristem identity, floral organ development, regulation of cell differentiation, regulation of cell differentiation, hormone-mediated signaling pathway, maintenance of root meristem identity, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   endoplasmic reticulum membrane, plasma membrane, endoplasmic reticulum membrane, plasma membrane, endoplasmic reticulum membrane
Molecular Function   enables   protein binding, protein binding, identical protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein binding, peptide receptor activity, protein binding, peptide binding, protein binding, protein binding, protein binding, protein binding, peptide receptor activity
SNP Position Effect Amino acid change
A/G 12025323 missense_variant p.Trp563Arg
A/T 12025577 missense_variant p.Ile478Asn
A/T 12025579 synonymous_variant p.Ser477Ser
A/T 12025721 missense_variant p.Leu430Gln
T/C 12025762 synonymous_variant p.Leu416Leu
T/C 12025894 synonymous_variant p.Lys372Lys
T/C 12025972 synonymous_variant p.Gln346Gln
A/T 12026287 synonymous_variant p.Val241Val
G/T 12026376 missense_variant p.Leu212Ile
C/T 12026379 missense_variant p.Glu211Lys
G/A 12026881 synonymous_variant p.Ala43Ala
A/T 12026992 synonymous_variant p.Leu6Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00863.1
MGTSTLGLVLVPLLLCFASVSSLPMSLRRQASILVSLKQDFEANTDSLRSWDMTNSVSLCTWEGIECDQKNRSVVSLDITNLNLSGTLSPSITALRSLESVSLAGNGFSGGFPSDIHKLAGLRFLNISANKFSGDMNWEFSMLKELEVLDAYDNEFNCSLPLGVTQLPKLNTLNFGGNFFYGEIPPSYGDMVQLNFLSLAGNDLRGVIPSELGNLTDLTQLFLGYYNQFDGGIPPQFGKLVNLTHLDLASCGLTGPIPAELGNLNKLDTLFLQTNQLSGSIPPQLGNMSGMKCLDLSNNELTGDIPNEFSGLHQLTLLNLFINRLHGEIPPFIAELPNLEVLKLWQNNFTGAIPPRLGQNGKLVELDLSTNKLTGLVPKSLCLGRRLRILILLNNFLFGSLPADIGQCYTLQRVRLGQNYLTGSIPNGFLHLPELDLLELQNNYLSGWLPQETNTAPSKLGQLNLSNNRLTGSLPSSIGNFPNLQILLLHGNRLSGEIPPDIGRLKNILKLDLSVNNFSGTIPPEIGNCLLLTYLDLSQNQLSGPIPVQLSQIHIMNYLNVSWNHLNQNLPKELGAMKGLTSADFSHNDFSGSIPEEGQFSVFNSTSFIGNPRLCGYEMNPCKHSSNSVLESQDSSSTKPGVPGKYKLLFAVALLA


CDS Sequence:
>Vu_00863.1
ATGGGAACTTCAACTCTTGGCCTTGTACTTGTACCACTTCTTTTGTGCTTTGCTTCTGTTTCCTCTCTTCCCATGTCTCTGAGAAGGCAAGCCTCTATCTTGGTTTCCCTCAAACAAGATTTTGAGGCCAACACTGATTCTCTCAGAAGCTGGGACATGACTAATAGTGTGTCCCTTTGCACTTGGGAGGGTATTGAGTGTGACCAAAAGAATAGGTCAGTGGTGTCATTGGACATAACCAACCTCAACCTTTCTGGCACACTTTCACCTTCCATCACAGCACTCAGGAGCCTTGAGAGTGTATCACTTGCTGGGAATGGCTTCTCAGGAGGGTTCCCTAGTGATATTCACAAGCTGGCAGGGCTGAGATTCCTCAACATATCCGCCAACAAGTTCAGTGGAGACATGAATTGGGAGTTCTCTATGTTGAAAGAGCTTGAGGTGCTGGATGCTTATGACAACGAGTTCAACTGCTCCCTCCCTCTTGGTGTCACTCAGCTCCCCAAGCTCAATACCTTGAATTTTGGCGGGAATTTTTTCTATGGTGAGATCCCTCCAAGCTATGGAGACATGGTTCAGCTCAACTTTCTGTCTCTTGCCGGAAATGATTTGAGGGGTGTCATACCATCTGAGCTTGGGAATCTCACTGACCTGACACAGCTTTTCTTGGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTCAGTTTGGTAAGTTGGTTAATTTGACTCATCTTGACCTTGCAAGCTGTGGTTTGACAGGTCCAATTCCGGCTGAGTTGGGAAATCTCAACAAATTAGACACTCTCTTTTTGCAAACTAACCAGCTCAGTGGCTCAATCCCTCCCCAACTAGGCAACATGAGTGGCATGAAGTGTCTTGATCTGTCAAACAATGAGCTAACAGGAGACATCCCCAATGAGTTTTCAGGCCTTCACCAACTCACCCTCTTGAACTTGTTCATCAACAGGTTGCATGGTGAAATTCCACCTTTCATTGCGGAGCTGCCTAACTTGGAAGTGCTGAAACTTTGGCAAAACAACTTCACAGGGGCAATTCCCCCAAGACTTGGCCAAAATGGTAAACTGGTTGAGCTTGACCTGTCAACAAACAAACTCACTGGATTGGTGCCTAAATCTCTTTGCCTTGGGAGGAGGCTGAGGATTTTGATTCTTCTCAATAATTTTCTCTTTGGATCTTTGCCGGCTGATATTGGCCAATGCTACACACTACAGAGAGTTCGTTTAGGACAGAACTATTTGACAGGGTCAATACCAAATGGTTTTCTGCACTTGCCTGAGTTAGATCTTTTAGAATTGCAGAACAATTACCTCAGTGGTTGGCTTCCACAAGAGACAAACACTGCACCCTCTAAACTTGGACAGTTGAATCTATCAAACAATCGCCTAACCGGGTCTCTACCAAGCTCTATTGGAAACTTTCCCAACTTGCAAATTCTGCTGCTTCACGGAAATAGACTCTCAGGAGAAATTCCTCCAGATATAGGGAGGTTAAAAAATATCCTCAAGTTGGATTTAAGTGTCAACAACTTCTCAGGCACCATCCCTCCAGAGATAGGTAACTGTTTGTTGCTCACCTATTTAGATTTGAGCCAAAACCAACTGTCAGGTCCTATCCCAGTTCAGCTTTCTCAAATTCACATAATGAACTATCTCAATGTCTCATGGAACCACCTAAACCAAAATCTTCCCAAGGAACTTGGGGCCATGAAGGGCTTGACTTCAGCAGATTTTTCTCACAATGACTTCTCTGGTTCAATACCTGAGGAGGGGCAATTTTCAGTGTTTAACTCTACATCCTTTATTGGGAATCCTCGACTCTGTGGATATGAAATGAATCCATGTAAACATTCTTCAAATTCTGTATTGGAGTCCCAAGACAGTAGCAGCACAAAACCTGGTGTTCCTGGGAAGTATAAGCTTCTTTTTGCAGTGGCACTGTTGGCTT


Promoter Sequence:
>Vu_00863::LG1:12027009-12029009(-)
CAACACAGTCTCAAAAGAAGAATCGATGTCTTTGCCTTTTCTTTTTCACGTTATGGTGTAAAGCGAAAGGGTTAAAAACAACCACTGACCCTCCTTGTACAACACTGTTCCTTTTCGATTTTTAGTTTCATGTCTGTAATACAATTCTCTTGTTACGTATCATGATTATATTGAAATAATAGTGTATATAAAATATCACTTTCGAAATATTTTCCATGAAGAAACAGTATTTTTGTTATACTCCTATGTATGTGACAAAGGTAAATACAAAGAAATGGAGGGGACCAATGGTTGGAGTTTATGAGCTGACCAAGGTTACTTTCTTGCATCCTCATATCCTCATTATTCAGTCATCAACATTGTCTCATGTATACTATGAGTTGGCTACCACTCACTTCATATACAAAAAAAACCATTTTTTATCTTCCAAGTTTCATTTTTTGGGGGAGGAGCTGACAGGGATTGGGAAGTGGAAACTAAGATTCACTTTCTCAAAACCCCAGAAAAAGAAATTCAACATAAGTTTCTAAGATTTGCTTTCTCAATTCAGCAATTGGGTCTCTCATACCATGATGTATTGATTGGTAAATTGATGACCTGATTGCTACATCATGGCAAGTTCTTAAAAGTTGGATTTTTAATGCAGCCAGATCAACCCCATCACACGCTTTAATTTTCATTCCCTTTTCCTTTTTTTATCTGTCTTTTTTTAGATCACTCGTGACGTAATTTCTGCAGAAGAACCTCCCTCCGTCTGTTTAAAGATGATTCCAAACTTCATCTTCTGATTGAGCATAACAGTACTGAAAATAGCTTTTTTTCCTTTCTTTGCTTGATTTAAATGAATGATGCCCTAAATACACAAACTTTTGGACATGCAAAGTGAACACGTGCTGCTACAATGTGTTGTTCTGATTGCTAACATCAATCGAACTGTGTTATCAGATGGATCGAATTGCCTAAAAATAGGTTGCTCAGAAATTTCTTTCTCCATTTGTGAAACAAGTTAGTCACATCTAGTGCTATATTCATACATGCCATGTTATTTTTTCATCTTTTTCATCACATCAGTTAATTAATCTCACCATGGACACAAAGAAGTTACATGAAGTACAATTCCTGTGAGTCTCTAAGAGACGTGCCTTTTTTCTGCAAAATCATTCAGGTGTCCTTATTCAATAATTTAGCCCTATGAAATAGATGATTTATGACACAGTACAGTGGCTTCTATGGCTATATAGATATAGATATATATATATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCTTAATCGTGGTTATTTGTCTCTCTTTTTTAAAATAGAGATTAAGTTCCATTCATGACACCCCACCACATTCTCTTTCTCAAAATCCAGAAAATAATAAAAAAATGAAGGTACACTCAGCATGCACATTGTATCAATTTATTCTTGCCCATGATTGGTATCTATAATTTGGTCTAAGATTACATCCTATCATCCAAATCTGATTCATCAGCAGCTCTGGTGGACTTGGTTTATGAATAAACAAAACAACAAAGAAAAAGGTAAAGGCAATGGAGCTACTAGGCTCAAAAACCGACAGAACACAAACAAAAGGGGGAAAAAAAATAACTGGGTTGTGAAACGGTCCATGGTTAAGCATTTTCTATCCAAACACTGCTTTTACTTTTGCTTTTTAAAAGCTAAAGATGACACCAAAGTAGTGTGTGTGTATGTATGTTTGTGTGGGAGAAAATAAGAGAGGGGAAAGAGAAGACGACATAGGATGCTGCTACACTGTTACCTCTGAGCTCTTAACATTACAACACATAACACTTCTCACACGCACTCTTTCTCTTTCTCTTTCTCTCTCACCATCTGCTACTTCATATTCAGCACAACTCTATGATATTGCTATTATTCCAACTGCACTTCCTTAACTTGTAAGCCAGTTATCCCAAAA


Gene Sequence:
>Vu_00863(-)
ATGGGAACTTCAACTCTTGGCCTTGTACTTGTACCACTTCTTTTGTGCTTTGCTTCTGTTTCCTCTCTTCCCATGTCTCTGAGAAGGCAAGCCTCTATCTTGGTTTCCCTCAAACAAGATTTTGAGGCCAACACTGATTCTCTCAGAAGCTGGGACATGACTAATAGTGTGTCCCTTTGCACTTGGGAGGGTATTGAGTGTGACCAAAAGAATAGGTCAGTGGTGTCATTGGACATAACCAACCTCAACCTTTCTGGCACACTTTCACCTTCCATCACAGCACTCAGGAGCCTTGAGAGTGTATCACTTGCTGGGAATGGCTTCTCAGGAGGGTTCCCTAGTGATATTCACAAGCTGGCAGGGCTGAGATTCCTCAACATATCCGCCAACAAGTTCAGTGGAGACATGAATTGGGAGTTCTCTATGTTGAAAGAGCTTGAGGTGCTGGATGCTTATGACAACGAGTTCAACTGCTCCCTCCCTCTTGGTGTCACTCAGCTCCCCAAGCTCAATACCTTGAATTTTGGCGGGAATTTTTTCTATGGTGAGATCCCTCCAAGCTATGGAGACATGGTTCAGCTCAACTTTCTGTCTCTTGCCGGAAATGATTTGAGGGGTGTCATACCATCTGAGCTTGGGAATCTCACTGACCTGACACAGCTTTTCTTGGGATACTACAATCAGTTTGATGGTGGAATCCCTCCTCAGTTTGGTAAGTTGGTTAATTTGACTCATCTTGACCTTGCAAGCTGTGGTTTGACAGGTCCAATTCCGGCTGAGTTGGGAAATCTCAACAAATTAGACACTCTCTTTTTGCAAACTAACCAGCTCAGTGGCTCAATCCCTCCCCAACTAGGCAACATGAGTGGCATGAAGTGTCTTGATCTGTCAAACAATGAGCTAACAGGAGACATCCCCAATGAGTTTTCAGGCCTTCACCAACTCACCCTCTTGAACTTGTTCATCAACAGGTTGCATGGTGAAATTCCACCTTTCATTGCGGAGCTGCCTAACTTGGAAGTGCTGAAACTTTGGCAAAACAACTTCACAGGGGCAATTCCCCCAAGACTTGGCCAAAATGGTAAACTGGTTGAGCTTGACCTGTCAACAAACAAACTCACTGGATTGGTGCCTAAATCTCTTTGCCTTGGGAGGAGGCTGAGGATTTTGATTCTTCTCAATAATTTTCTCTTTGGATCTTTGCCGGCTGATATTGGCCAATGCTACACACTACAGAGAGTTCGTTTAGGACAGAACTATTTGACAGGGTCAATACCAAATGGTTTTCTGCACTTGCCTGAGTTAGATCTTTTAGAATTGCAGAACAATTACCTCAGTGGTTGGCTTCCACAAGAGACAAACACTGCACCCTCTAAACTTGGACAGTTGAATCTATCAAACAATCGCCTAACCGGGTCTCTACCAAGCTCTATTGGAAACTTTCCCAACTTGCAAATTCTGCTGCTTCACGGAAATAGACTCTCAGGAGAAATTCCTCCAGATATAGGGAGGTTAAAAAATATCCTCAAGTTGGATTTAAGTGTCAACAACTTCTCAGGCACCATCCCTCCAGAGATAGGTAACTGTTTGTTGCTCACCTATTTAGATTTGAGCCAAAACCAACTGTCAGGTCCTATCCCAGTTCAGCTTTCTCAAATTCACATAATGAACTATCTCAATGTCTCATGGAACCACCTAAACCAAAATCTTCCCAAGGAACTTGGGGCCATGAAGGGCTTGACTTCAGCAGATTTTTCTCACAATGACTTCTCTGGTTCAATACCTGAGGAGGGGCAATTTTCAGTGTTTAACTCTACATCCTTTATTGGGAATCCTCGACTCTGTGGATATGAAATGAATCCATGTAAACATTCTTCAAATTCTGTATTGGAGTCCCAAGACAGTAGCAGCACAAAACCTGGTGTTCCTGGGAAGTATAAGCTTCTTTTTGCAGTGGCACTGTTGGCTT