Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00906 LG1 12371076 12373264 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   anthocyanin-containing compound biosynthetic process, camalexin biosynthetic process, trehalose biosynthetic process, proline biosynthetic process, trehalose biosynthetic process, camalexin biosynthetic process, regulation of transcription, DNA-templated, regulation of reactive oxygen species metabolic process, proline biosynthetic process, hyperosmotic salinity response, camalexin biosynthetic process, hyperosmotic salinity response, regulation of reactive oxygen species metabolic process, regulation of transcription, DNA-templated, leaf senescence, trehalose biosynthetic process, regulation of transcription, DNA-templated, leaf senescence, anthocyanin-containing compound biosynthetic process, trehalose biosynthetic process, camalexin biosynthetic process, negative regulation of leaf senescence, negative regulation of leaf senescence, regulation of transcription, DNA-templated, proline biosynthetic process
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/C 12371091 synonymous_variant p.Leu6Leu
C/T 12371165 synonymous_variant p.Asp30Asp
G/A 12371263 stop_gained p.Trp63*
C/T 12371289 downstream_gene_variant
T/C 12371307 downstream_gene_variant
G/A 12371336 downstream_gene_variant
T/C 12371387 downstream_gene_variant
T/C 12371422 downstream_gene_variant
T/A 12371450 downstream_gene_variant
G/T 12371473 downstream_gene_variant
C/A 12371532 downstream_gene_variant
G/A 12371538 downstream_gene_variant
T/A 12371540 downstream_gene_variant
T/G 12371541 downstream_gene_variant
G/T 12371574 downstream_gene_variant
G/A 12371598 downstream_gene_variant
A/G 12371685 downstream_gene_variant
A/G 12371943 downstream_gene_variant
T/G 12372000 downstream_gene_variant
C/A 12372010 downstream_gene_variant
G/A 12372025 downstream_gene_variant
C/A,G 12372031 downstream_gene_variant
A/G 12372124 downstream_gene_variant
A/T 12372151 downstream_gene_variant
A/G 12372192 downstream_gene_variant
A/G 12372203 downstream_gene_variant
A/G 12372204 downstream_gene_variant
A/G 12372212 downstream_gene_variant
A/T 12372286 downstream_gene_variant
A/T 12372287 downstream_gene_variant
T/A 12372288 downstream_gene_variant
T/A 12372295 downstream_gene_variant
T/C 12372426 downstream_gene_variant
C/T 12372477 downstream_gene_variant
G/A 12372478 downstream_gene_variant
A/T 12372480 downstream_gene_variant
T/A 12372492 downstream_gene_variant
C/G 12372646 downstream_gene_variant
A/C 12372746 downstream_gene_variant
A/G 12372818 downstream_gene_variant
T/C 12372846 downstream_gene_variant
G/T 12372849 downstream_gene_variant
G/A 12372883 missense_variant p.Val70Met
C/G 12373120 missense_variant p.His149Asp
A/G 12373173 synonymous_variant p.Ser166Ser
A/C 12373226 missense_variant p.Gln184Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00906.1
MDVSKLHNSDEEDKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKQIDIYKYDPWDLPMWTLCRIFKRVPSYKRYTPNLKDSNTAPITKPNPTNSSSSKTCSLESDTAKPCLTFTNSPSSLLLPQNQMIKPVFGHVDQQPPTSFSYSSFWNHQNLELAHENWDDLTSVVQFAVDPSRLSDHCKEFNRF*


CDS Sequence:
>Vu_00906.1
ATGGATGTGTCCAAGTTACATAACTCTGATGAAGAAGACAAGAAAGAAGACGAAGTTGTGCTTCCCGGCTTCAGATTCCATCCAACAGACGAAGAGCTTGTGGGCTTTTATCTCAGGCGAAAGGTGGAGAAGAAGCCTCTCAGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCATGGGATCTTCCAATGTGGACGCTGTGTCGAATATTCAAACGAGTCCCATCTTACAAGAGGTACACACCAAATTTGAAAGACTCAAACACAGCACCAATCACGAAGCCAAACCCCACAAACTCTTCAAGTTCCAAAACATGCAGTTTAGAATCTGACACCGCCAAGCCATGCTTGACTTTCACAAACTCACCATCATCACTGCTCCTTCCCCAAAACCAAATGATCAAACCAGTTTTTGGACATGTTGACCAACAGCCTCCCACATCCTTTTCCTACTCGAGTTTTTGGAACCATCAGAATCTGGAATTGGCTCATGAGAATTGGGATGATCTCACTTCTGTCGTTCAGTTTGCTGTTGATCCATCCAGGCTTTCTGATCACTGTAAAGAGTTTAATAGATTTTGA


Promoter Sequence:
>Vu_00906::LG1:12369076-12371076(+)
GAGTCAGTCTCGTGCATTATATATAATCAAATAATGAAATTAATTCATAATTTAAAAATTAAAAAATTTTAAAATATGATAAAATCCTCCTTGGGACGCAAGTAAGCTTCACTCTTGTCATAAGCGCGTGAAAGTAATATTATTAACCCATCATTCTACTTTTGCCTACTAAAATTTGGGCTTTAAGTGGGCCGGTGGCCTATGCCCAGTAGTCTTTTATTTAGATTAGTCTAAAAATTGAATTCTTTTATTTTATTTTGATATGAAAATTGTGTTGTACTTTTCTTTAGTCTTTTCTATTTTCATGCGTCAAATTCCCTGTTTTATCATCTTTAGTACTACACTATATGATTAACTGAATTGAACTTCGGCAAAATTGTTAAAATATTTTTTGAAAAAACTAGACTAAAATGTTTTTAAATATGGTGTTTGAAAATTGATTTATGTTTTAAAATATAGAATTTAATCTTATACAATGGTATAAATCTTATAAAAGACTTAGCTGAATTGTTGATTATATAATTAAAAAAGAAAAGAAACCTCATTCGTAAATTTTCATATATACAAGTTTGATTTTTTGGTAACCACTTGAATAGATTTGGAGGAGAGTGATTGAGTGGATTTGAAGATAAATTTTGTTGTTGTTTATTTGAGAAGTTTGAAGGTAAGTGAAAATGAATTTGGAAGCAACATTTTGATGTGACAGATTAAAAAAATTTACTTCCAAATCAATTCTCACCTACCTCCAAATCTACTCAAATAAACAACAACAAAAATTATTTTCAAATTCATTCAATCAGTCTCTCTCAAATCCAAGTGAACAAAGAATTACTTAATGTTAATCTTCTTAGCTTTCATCATCTAACGTCATTTCAATATTAATTATGTTTTTTTGTCTTTTTACAGTGGGATATAAATGTTTAACAATACGAAGGCAATAAAGTGTATATCAAGAAAATCCATTAAAATTAAACCACTTGTTTTATTTTAAACTTGTCACTAATTCATTATTTATTATCATATATAAGCTTTTTATTACTGATAAATAAAAATCACATAAACAAACATGTTAATATTATATTTTTATAAAAAAATAGAAATTATTAATACGTGGATTCGACCAACATTACTTAAACTACAGGCTTAAAAGAAAATAATAAAAAAATAACAATAGTCTTTGATTCTTTGGAAACAGATAAAAGTTTGGAGTGACGTCATGTATTGTCACGAATGAATTATTAATAATAAAAAAATTGTGTTAGAAAGAAAGTAGTAACATTTTAGAAGATATTTAGAAATGAGAAATAGACATTGATGTTGGAAGAAGCGCCAATAATCTAATTGTTAAAGTTAGCTTTCGAAAATTCTCTACAGACAAATAATGACTTTGAAATCTCCTTTGACCTTTTCCCTTCTTTAATTGCAATCCATATATCTATATCATAGTCAAACTTGTGCCCACTCTCGTAGACTTTATCTCTTGTTGCCTGTAAGCTAACATTCATTGACCTTCTGCCCACCATTAACTTAATCATATCAAAATTATTATTATATCATTCTTAATTCAAAACTTTAAGATAAAAAAAATTCTTTAAGAACCTGATTTTTCAAATTTTTAAACAAATTGATTAACCATAATTCTATTTAAAATGTTTTTTTCACAGAGAGAATAATGCAGTAGGCATGTAAGATATGCTATTTACGATTATAGGGAATGAACTCTAATAATTTTTTAAAGAGATTTAGATATTATAACTATCTATAGTTTGAAAATATTATTTTAATTCCAAAATCAGCTTATGTGATTTGTTAAAAAAACCTGTACTTGAATTTAATTTTGATGACAGCCACACACTGTTTAATGGAAATGTTTGACTTGACTGCGGCAGCTAATATTCAATTTACACACTGCGGCGACAGAAATTAATATAAGTAGATGAAAAGGAGGAACATAGCCCACAGGTTAGAAGAAGGTTCTCAAGTTTTACAGAGATTAACAA


Gene Sequence:
>Vu_00906(+)
ATGGATGTGTCCAAGTTACATAACTCTGATGAAGAAGACAAGAAAGAAGACGAAGTTGTGCTTCCCGGCTTCAGATTCCATCCAACAGACGAAGAGCTTGTGGGCTTTTATCTCAGGCGAAAGGTGGAGAAGAAGCCTCTCAGAATTGAACTCATCAAACAGATTGACATCTACAAATATGATCCATGGGATCTTCCAAGTAAGATCACCTTCCTCTTCGTTAATATTTTTTGTATCTGATGCAGCAAATGAATTTCATCGGTTTGGTTACAGTTCTTCTGCATAATTCAAATTAAGGACTGGAGTGTACGTTAGGTGTTTGATTTTATGATTTCATGATTTGATATGTGATTGAAGTTACACACTAAAAACAATGTTAATTTATGATAAAAATGGAGGCAAACTTTAGCTTACAATTTTTATGAAGTTTAGCTAGACTTAAAGTCTACTTGTTACCAATACGATTAGATATGATTATTGTCTGATTTGTGTTTTTGTGTGGTGGTGACTGGTGTATGAAGAGGCAAGTTCTGTGGGGGAGAAGGAGTGGTATTTCTTCTGCATAAGAGGGAGAAAGTACAGAAACAGCATAAGGCCTAACAGAGTGACAGGGTCTGGGTTTTGGAAAGCCACCGGGATTGATAAACCGATATACTGTGTTAAAGAACCCCATGAATGCATTGGGTTGAAGAAATCATTGGTTTATTACCGTGGAAGTGCTGGAAAAGGCACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCACCCAATGGAAAATCCACCACTAACCCACAACCTAATGACATTCAAGAAGCTGTAAGTCAATTATGCTATGTCACTCTTATGAATATTTTACTTTCTTCATCACAACAATAATTACAATTCTTCTTGCTTTTAGAACATTCAATTGTCACTTTTTTTTTTACATTGCATATACTTAGATAAGGGATCCTTGTAACAGTGAAAAAAAAGGACCGAGTTTAATTATTGTAGTTTATTTTAATTATATTTATAATTTTACACAAATTAAAAAAATAGGAAAATATACTGTTTTAGGAATATTAGTTTTATAAAATTAGTCTGATACTTTCCATAAATGCATTATTTTGACTATGACAGATAGAATAGTACTAATATGATAACAAATTAAAAGGAAAATATATAATATTTTATTGAAATGTGAGCATATATTAGTCAAACTAAAAAAATTTTGGATAGGAAAAGGTAAAATAATTATTATAAAAAACAATATTTTTATGATTTATACTTGAGGAATATTCCATTTTACACTAGGTTTACATAATATATTAACATTGTTTATCTTTAATTATTCACTCGTGTATTTCTAACACATGAAGATAGTTCAAAAAAATTACTTAATAAACCTAGAATCAATTCGAAATAAAGTGGAATAAAAGTCAATATACCTATCTTCTCTGATCTTAGAAAAACTGCGTCTCATGTTTCTTGTTTATGTAGTAATGAAAAGAAGTTTAAGAAAATGTTAAATTAATAAACCCATCTAGAACCGTGGGAAAAAGACAATTGTGAGATAACATAGTCAAACCACCACAAGTTTCTGAGATTCGGATTGGAAGCATGTTCATATTCAAGAAGACCAGAAACAAACAATTGTATCTCTATACTTTTCTAAAGTCTGAAGCACATTTGTTGGACCCAAAAAGGAGAATTAATTAGTCACAGATTAAGACATTATGAATTTTAATATTTGCATGGTATTGAGGAATTTAATGTGTGGTTGTGTTTGGGTTTTTTGTGTGTTTGGCAGGAAGTGTGGACGCTGTGTCGAATATTCAAACGAGTCCCATCTTACAAGAGGTACACACCAAATTTGAAAGACTCAAACACAGCACCAATCACGAAGCCAAACCCCACAAACTCTTCAAGTTCCAAAACATGCAGTTTAGAATCTGACACCGCCAAGCCATGCTTGACTTTCACAAACTCACCATCATCACTGCTCCTTCCCCAAAACCAAATGATCAAACCAGTTTTTGGACATGTTGACCAACAGCCTCCCACATCCTTTTCCTACTCGAGTTTTTGGAACCATCAGAATCTGGAATTGGCTCATGAGAATTGGGATGATCTCACTTCTGTCGTTCAGTTTGCTGTTGATCCATCCAGGCTTTCTGATCACTGTAAAGAGTTTAATAGATTTTGA