Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00978 LG1 12921750 12923185 PREDICTED: disease resistance protein LAZ5-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   developmental growth, defense response to bacterium, defense response, defense response to bacterium, negative regulation of metabolic process, defense response to bacterium, signal transduction
Cellular Component   located in   nucleus, nucleus, cytoplasm, cytoplasm, cytoplasm, cytoplasm, cytosol, nucleus, cytoplasm
Molecular Function   enables   ADP binding, ADP binding
SNP Position Effect Amino acid change
G/A 12921784 missense_variant p.Ser12Asn
A/G 12921826 missense_variant p.Tyr26Cys
G/A 12921852 missense_variant p.Glu35Lys
A/G 12921865 missense_variant p.Asn39Ser
A/T 12921951 missense_variant p.Thr68Ser
G/A 12921954 missense_variant p.Glu69Lys
C/T 12921966 missense_variant p.Arg73Cys
A/C 12922058 missense_variant p.Lys103Asn
T/G 12922093 missense_variant p.Phe115Cys
A/G 12922194 missense_variant p.Ile149Val
C/G 12922200 missense_variant p.Arg151Gly
C/A 12922211 splice_region_variant&intron_variant
T/C 12922220 upstream_gene_variant
C/T 12922226 upstream_gene_variant
C/T 12922242 upstream_gene_variant
C/A 12922246 upstream_gene_variant
T/C 12922314 upstream_gene_variant
C/G 12922346 upstream_gene_variant
C/T 12922380 splice_region_variant&intron_variant
T/A 12922413 missense_variant p.Leu162Met
C/T 12922549 missense_variant p.Pro207Leu
T/C 12922575 missense_variant p.Phe216Leu
C/G 12922584 missense_variant p.Leu219Val
C/A 12922632 missense_variant p.Leu235Met
G/T 12922646 missense_variant p.Gln239His
C/G 12922698 missense_variant p.Pro257Ala
G/A 12922731 missense_variant p.Glu268Lys
C/T 12922785 synonymous_variant p.Leu286Leu
C/T 12922792 missense_variant p.Thr288Met
A/T 12922801 missense_variant p.Asp291Val
A/T 12922803 missense_variant p.Met292Leu
A/G 12922941 upstream_gene_variant
T/C 12922947 upstream_gene_variant
T/G 12922995 missense_variant p.Trp327Gly
G/T 12922996 missense_variant p.Trp327Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00978.1
MESEQCHDVYLSLKGKIHYGFGGNLYNALRKKGFETMMNKEGMQSGSQDSPFLLRAIEQSRISIVVFTEDYPRYTWCLKELVKIVECMETKNQLVFPIFYKVKPYNVREQKKSYFNAFARHDKKFGKDSDEVRKWRSAMSRVANLPGLIARSGYEYEHLEKVVEMVTRSLSRYDIFISFRGPDTRYSFTGFLYQALSRERFKTFMDAEELKDGDKIPSAITEAIESSRLSIVVLSENYADSSSCLDELDTIMKCMKTKNQLVWPIFYRVEPTTVRNQKNTYHQAMAEHEQRYGRDSSKVSKWRQNLSEVADLKGFPLQRDEYEYKVVEEIVTKAIENDNGRYSHVTSLDLSGMNNGDENELASSSPSTSRNQHTTDNDDEDCSSELSVG*


CDS Sequence:
>Vu_00978.1
ATGGAATCGGAACAGTGTCACGATGTTTATCTGAGTTTGAAAGGGAAAATCCACTACGGCTTCGGCGGAAATCTGTACAACGCGCTGCGGAAGAAGGGGTTCGAGACTATGATGAACAAAGAGGGAATGCAGAGTGGTTCCCAAGATTCACCCTTTCTTCTGAGAGCAATCGAGCAATCTAGAATCTCGATCGTTGTTTTCACCGAAGACTACCCACGTTACACTTGGTGTCTGAAGGAGCTTGTCAAGATTGTCGAGTGTATGGAGACCAAGAACCAATTGGTTTTCCCAATCTTCTACAAAGTCAAACCCTACAACGTCAGGGAACAGAAGAAATCCTACTTCAATGCCTTTGCCAGACACGACAAGAAGTTCGGGAAGGACTCCGACGAAGTCCGCAAATGGCGGTCTGCTATGTCTCGAGTCGCCAATTTGCCTGGACTCATCGCTCGATCTGGGTATGAATATGAGCATCTTGAAAAGGTTGTGGAAATGGTGACTCGATCCTTGTCTCGGTACGATATCTTTATCAGTTTTAGGGGACCAGATACTCGTTACTCCTTCACGGGTTTTCTGTATCAAGCACTGTCCCGAGAGAGATTCAAAACCTTCATGGATGCCGAAGAGTTGAAAGACGGGGACAAAATTCCATCGGCTATTACTGAAGCCATCGAATCGTCAAGGCTATCCATTGTTGTTCTTTCTGAAAACTACGCAGATTCTTCGTCGTGTCTTGATGAACTTGACACCATCATGAAGTGTATGAAGACCAAGAATCAGTTAGTTTGGCCAATATTTTACAGAGTGGAACCCACCACAGTAAGGAATCAAAAGAACACTTATCACCAAGCCATGGCTGAACACGAACAAAGATATGGACGTGACTCTAGTAAGGTGTCGAAATGGAGACAGAATTTGTCTGAAGTTGCTGACTTGAAAGGATTCCCTCTTCAACGTGATGAGTATGAATATAAAGTGGTGGAGGAGATTGTGACAAAAGCCATTGAGAATGATAATGGAAGATACTCCCATGTAACAAGTCTTGACTTGAGTGGCATGAACAATGGTGATGAAAATGAGTTGGCTAGTTCGAGTCCTAGTACTAGCAGGAATCAACACACCACTGACAATGATGATGAAGATTGTTCCTCTGAATTAAGTGTGGGCTAG


Promoter Sequence:
>Vu_00978::LG1:12919750-12921750(+)
TTTAAAATTGGTTATATAAAAGAATTTGAAAAAAAAATTGTTGTTATTATAAAAATAGCCTTTGTATAAAAATTGAATGAAAGATAGAAGAAAATTGGATGTTTTTTTTGGGTATGGGTATTTGTTCTTACGGAGATTTGGATATGATTATAGTATCTGAAGAAATATCATATATATTTCGAATTTCTAAACTCTATATAATATGTTATAAAATAAAATATAACAAAACTTATCAATAATACTGATATATTATTTAACTAGATTAATAATATATGACGTTGACATATGATATAAATGATATTTGTGAGATAATTGACACCACATATTTTATAATTGATTTAACTATGCGAATTTTGATATTTTGGTTGAGATTTAATTAAGTACGAGTTTAAATTCAACAATAAGAAAATAAAACAGTATATAAAGGTGAATACTCATTATTCTATTGTCTTCATATTTTAGGTAGAAAGTGTCAATTTCCTATATGATTAGACTCAGATATCATCGATGTTTGTATTTAAGGAATTACTCCTAACACCTCTCAGTCTGCAGAATCGCCACATCCTTTTTCTCACTCAGCTACCATGCACTGCATCCTTTCCCTTGCCATTTTCACTGCATACAACACCTTCACCTCCCATGTCAACATGTGTTGTCGTGCCAATATCGAGGAGGTGTAGAATATTTTTGAAATAAAAGAAAATAGTAAAGAAGTGCAGAAACACTTAGGATGGTGGAGAGAACAACATAATTGTATTCATTATTCCATTGTCTCCTATAAACCATTGTTATGTGTTCATGACATTTTAGAACATATGATTTATTTCATAATTTGTTATTCTTATAAAATACACAATAAACATATTTATATTTTCTAATACTTCATTTACCAGTTATAAGATTTGAATTTAAATAAACTACAAATAACTATCTAAACCTGTCCTTAGCAGTTTTCAAATTCACATGCCTCATTTATCAAGTCTTTGAAGTTAATTGTTATTTTGTTATCCTCAATTGCTTATTTAATGTTTATCTTCAATTCTTGATTCTTCTTTGACTAATATTTCACAAAAGACAATTAAATGATTTTTAAAGAATTATGTTTGTCTTATGCATCCATCTTATAAAGAAGTATTTGATAAAATTGTTCTTCGGCCATACCATTTCTATAGAATATAATCTCTATGATTTACAACCAATAAGACGTAAAATGCACGAGATGACACTTTTCAGCATTGGTCTTACTGATATCATTCTTATAATCTTTAAGCCCTATTATTAACCTTATTAACCTCCAATTCTATAATAATTCTCGATTTCTGAAATAATTTCTTTCCATATCCATGCCCTGAACACATATACTTTGATTTTTCTACTTATTTAGCTGAGTTTAATTAAGAAAAAACTATTCATTTGGTTTTTTTTTTATCTAAATAACATTATTTTTCCGAACAAAATTTCATCGGTGGAGCTTATCGAATATGAAAAGCTAAAAGCTTCAACTCCGTATTGTCCAATCATGTCGATGCCCCCACTTTCTCGGAAGCAGTATTTCATAAATCAACACTTGTCTTTACTCTACAAACTAATTTATTTAACGTAAGAAAAGTATTTATTTTACGGAGGATATCATAGACTTAACTTTGAATTTCTTGTATATAAAAAAGAATATATAAATAAAAGCATTTGAAATATAGTACGATGTTGGAATGTAATAAATAAAGAGAAGTTCTGCATTCTGTGGAGAAAGATAAAGCACAGAGGTATTGGATTCTGTCTGAAAGCATAATGACCAAAGGAACACCAAAAAAGACGACAACATGAAGGAACGAACAAGTAACAGTATTCAAAAACATCTTGATGGTACCTTAGACAATAAGTTCTCCGAACTTGCTTCAAAAACTTTAGTTACGCGCTTACTAAAGTGATGAGCAGAAGCTCCTATTTATGATGAGTCTGGAATTGCGAGAGTGGAAGGTGTGTGAGTGAGAGGCATAGCA


Gene Sequence:
>Vu_00978(+)
ATGGAATCGGAACAGTGTCACGATGTTTATCTGAGTTTGAAAGGGAAAATCCACTACGGCTTCGGCGGAAATCTGTACAACGCGCTGCGGAAGAAGGGGTTCGAGACTATGATGAACAAAGAGGGAATGCAGAGTGGTTCCCAAGATTCACCCTTTCTTCTGAGAGCAATCGAGCAATCTAGAATCTCGATCGTTGTTTTCACCGAAGACTACCCACGTTACACTTGGTGTCTGAAGGAGCTTGTCAAGATTGTCGAGTGTATGGAGACCAAGAACCAATTGGTTTTCCCAATCTTCTACAAAGTCAAACCCTACAACGTCAGGGAACAGAAGAAATCCTACTTCAATGCCTTTGCCAGACACGACAAGAAGTTCGGGAAGGACTCCGACGAAGTCCGCAAATGGCGGTCTGCTATGTCTCGAGTCGCCAATTTGCCTGGACTCATCGCTCGATCTGGGTACGTAAACTTTTCTAACTCAAATCCAAAACAACTTGCATCAGTAGGGTTATTTTAGTTCATTCAACACTCACATTTGATGTGTCAAAGTCATACATTATTTGTTTGTTAAAGTACTAGGTTGTGCAATTAATAAAACTTGCGTTGTGGTGTGTTGTGTTGTGATCTTAATCTGATAGGTATGAATATGAGCATCTTGAAAAGGTTGTGGAAATGGTGACTCGATCCTTGTCTCGGTACGATATCTTTATCAGTTTTAGGGGACCAGATACTCGTTACTCCTTCACGGGTTTTCTGTATCAAGCACTGTCCCGAGAGAGATTCAAAACCTTCATGGATGCCGAAGAGTTGAAAGACGGGGACAAAATTCCATCGGCTATTACTGAAGCCATCGAATCGTCAAGGCTATCCATTGTTGTTCTTTCTGAAAACTACGCAGATTCTTCGTCGTGTCTTGATGAACTTGACACCATCATGAAGTGTATGAAGACCAAGAATCAGTTAGTTTGGCCAATATTTTACAGAGTGGAACCCACCACAGTAAGGAATCAAAAGAACACTTATCACCAAGCCATGGCTGAACACGAACAAAGATATGGACGTGACTCTAGTAAGGTGTCGAAATGGAGACAGAATTTGTCTGAAGTTGCTGACTTGAAAGGATTCCCTCTTCAACGTGATGAGTAAGTGTTACATTTTCCTTTACTTGAAGGGGACAATAATCGTTGAACAGATAAATTAAAATTGATTTTTGTTTGTTTATTTTGTAGGTATGAATATAAAGTGGTGGAGGAGATTGTGACAAAAGCCATTGAGAATGATAATGGAAGATACTCCCATGTAACAAGTCTTGACTTGAGTGGCATGAACAATGGTGATGAAAATGAGTTGGCTAGTTCGAGTCCTAGTACTAGCAGGAATCAACACACCACTGACAATGATGATGAAGATTGTTCCTCTGAATTAAGTGTGGGCTAG