Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_00986 LG1 12982419 12986206 PREDICTED: calcium-dependent protein kinase 2-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, peptidyl-serine phosphorylation, protein autophosphorylation, peptidyl-serine phosphorylation, protein phosphorylation, signal transduction, protein phosphorylation, intracellular signal transduction, peptidyl-serine phosphorylation, protein autophosphorylation, protein phosphorylation
Cellular Component   is active in   cytoplasm, nucleus
Cellular Component   located in   plasma membrane, plasma membrane, plasma membrane, plasma membrane, cytosol
Molecular Function   enables   calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, calmodulin binding, calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity, calcium ion binding, calmodulin-dependent protein kinase activity, calmodulin-dependent protein kinase activity, calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
G/A 12982432 3_prime_UTR_variant
A/T 12982583 3_prime_UTR_variant
T/C 12982758 intron_variant
T/C 12982789 intron_variant
C/A 12982793 intron_variant
A/G 12982851 intron_variant
T/C 12982868 intron_variant
T/C 12982928 intron_variant
G/T 12982932 intron_variant
G/A 12982988 intron_variant
A/T 12983003 intron_variant
C/T 12983006 intron_variant
A/G 12983007 intron_variant
T/C 12983070 intron_variant
T/C,* 12983124 intron_variant
T/A 12983246 missense_variant p.Glu482Val
T/A 12983274 stop_gained p.Arg473*
C/T 12983284 splice_region_variant&synonymous_variant p.Gly469Gly
A/G 12983363 intron_variant
T/C 12983422 intron_variant
G/A 12983500 intron_variant
A/T 12983529 intron_variant
G/T 12983543 intron_variant
T/C 12983598 synonymous_variant p.Gly458Gly
G/A 12983832 synonymous_variant p.Leu408Leu
A/G 12983935 synonymous_variant p.Ala373Ala
C/T 12984039 intron_variant
A/C 12984234 intron_variant
A/T 12984254 intron_variant
G/A 12984277 intron_variant
C/T 12984319 intron_variant
T/C 12984344 intron_variant
G/A 12984346 intron_variant
A/T 12984348 intron_variant
C/T 12984371 intron_variant
T/G,A 12984380 splice_region_variant&intron_variant
C/T 12984450 synonymous_variant p.Ala309Ala
A/G 12984564 intron_variant
T/G 12984571 intron_variant
G/A 12984769 synonymous_variant p.Asp238Asp
T/A 12984770 missense_variant p.Asp238Val
T/C 12984835 intron_variant
G/T 12984864 intron_variant
A/C 12984911 intron_variant
C/T 12984916 intron_variant
G/C 12985052 missense_variant p.Ile199Met
C/A 12985055 synonymous_variant p.Val198Val
T/A 12985058 synonymous_variant p.Gly197Gly
G/A 12985070 synonymous_variant p.Cys193Cys
G/A 12985073 synonymous_variant p.Ile192Ile
G/A 12985076 synonymous_variant p.Asn191Asn
T/G 12985078 missense_variant p.Asn191His
G/A 12985085 synonymous_variant p.Asn188Asn
C/T 12985094 synonymous_variant p.Gln185Gln
C/T 12985103 synonymous_variant p.Val182Val
C/T 12985105 missense_variant p.Val182Met
T/A 12985106 synonymous_variant p.Ala181Ala
C/A 12985108 missense_variant p.Ala181Ser
C/T 12985118 synonymous_variant p.Arg177Arg
G/A 12985127 synonymous_variant p.Tyr174Tyr
G/A 12985130 synonymous_variant p.His173His
C/T 12985133 synonymous_variant p.Gly172Gly
C/T 12985136 synonymous_variant p.Lys171Lys
C/A 12985139 synonymous_variant p.Ala170Ala
A/G 12985205 synonymous_variant p.Asp148Asp
C/T 12985445 synonymous_variant p.Gly68Gly
C/A 12985447 missense_variant p.Gly68Trp
A/G 12985915 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_00986.1
MGSCLSKRGSEPEEHIGYRNAVGGAHNHKSHEPFVSQFPEKHAPQAAWRATVPSPGPKHAHRADTITGKPFEDVKQHYTLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVRRDDKEDMRREIQIMQHLSGQSNIVEFKGSFEDKNSVHVVMELCAGGELFDRIIAKGHYSERAAAAVCRQIVNVVNICHFMGVIHRDLKPENFLLSSKDDKGLLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLNRSYGKEADIWSAGVMLYILLSGVPPFWAETEKGIFDSILKGYIDFESNPWPNISSSAKDLVRKMLTKDPKKRITSAQVLEHPWLREGGNASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIQGLKAMFTNMDTDNSGTITYEELRAGLQRLGSKLTEAEVRQLMDAADVDGNGTIDYIEFITATMHRYRLERDEHLYGAFQYFDKDGSGYITRDELETAMKENGMGDEATIREIISEVDTDNDGRINYEEFCTMMRSGTQKGKLF*


CDS Sequence:
>Vu_00986.1
ATGGGTTCTTGTCTGAGTAAAAGAGGGTCAGAGCCAGAAGAACACATTGGTTACAGAAATGCTGTTGGGGGAGCCCACAATCACAAGAGCCATGAACCCTTTGTCAGCCAATTTCCTGAGAAACATGCTCCTCAGGCTGCTTGGAGGGCCACTGTTCCTTCTCCAGGCCCAAAACATGCTCACAGGGCTGACACAATCACTGGGAAGCCATTTGAGGATGTTAAGCAGCACTATACTCTTGGGAAAGAATTGGGGAGAGGCCAATTTGGGGTGACTTATCTCTGCACCGAAAATTCAACTGGTTTGCAATATGCCTGCAAGTCCATCTCAAAGAGGAAGCTTGTGAGAAGAGATGACAAGGAGGATATGAGGAGGGAGATTCAAATTATGCAGCATTTAAGTGGACAATCCAACATTGTGGAGTTCAAAGGTTCTTTTGAGGATAAGAACTCTGTTCATGTGGTCATGGAGCTGTGTGCAGGTGGTGAACTTTTTGATAGGATCATTGCGAAGGGGCACTACAGTGAAAGGGCTGCTGCTGCAGTGTGTAGACAGATTGTTAACGTTGTTAACATCTGCCATTTTATGGGAGTGATCCATAGGGATCTGAAGCCAGAGAATTTCTTGTTATCCAGTAAGGATGATAAGGGACTTCTCAAGGCCACAGATTTTGGTTTATCAGTCTTCATAGAAGAAGGAAAGGTGTATCGGGACATAGTTGGCAGTGCTTACTATGTTGCTCCAGAAGTTCTTAATCGTAGCTATGGGAAGGAAGCAGATATATGGAGTGCAGGAGTAATGCTGTATATCTTACTTAGTGGTGTACCTCCATTCTGGGCAGAGACGGAAAAGGGAATATTTGATTCCATATTGAAGGGTTATATTGATTTTGAAAGCAATCCATGGCCAAACATATCAAGCAGTGCGAAGGACCTTGTTCGCAAAATGCTTACAAAGGATCCAAAGAAACGCATTACTTCAGCTCAGGTTCTAGAGCATCCGTGGCTTAGAGAAGGTGGCAATGCTTCTGACAAGCCAATAGACAGTGCAGTGCTTTCCAGAATGAAGCAATTCAGAGCAATGAACAAACTAAAAAAACTAGCCCTCAAGGTCATTGCTGAAAATCTTTCTGAAGAAGAGATCCAAGGTCTGAAGGCAATGTTCACAAATATGGACACTGACAATAGTGGTACAATCACCTATGAGGAACTGAGGGCAGGACTGCAAAGACTTGGCTCAAAGCTAACTGAAGCTGAAGTGAGACAACTTATGGATGCCGCTGATGTAGACGGAAATGGAACAATTGATTACATAGAATTCATCACTGCTACAATGCACAGATACAGGTTGGAGAGAGATGAGCATCTTTATGGAGCCTTCCAATATTTTGATAAAGACGGGAGCGGGTATATCACAAGAGATGAACTGGAAACAGCCATGAAGGAGAATGGTATGGGAGACGAAGCCACAATCAGGGAAATTATATCTGAAGTTGACACTGATAATGATGGTAGAATCAACTATGAGGAATTTTGTACAATGATGAGGAGTGGAACCCAAAAGGGAAAGCTATTCTAA


Promoter Sequence:
>Vu_00986::LG1:12986206-12988206(-)
TTTAATTTGCAGCCTCAAAAGCTTAAACAATAGCCTTATTATTGGAAAAAAAATTGAAAAACAAAATAACACCACTCTCTCTCTTCTTTAAAAAAGTGTGGTGTGAATAACTTTTCAGAAAGGTTAAAATGAATTATCCAGTGACAAAGAATAAGGGGAGGACCGATATTCAACTTTAGGAAAAAAAAAATAAATGCGTCCTTATGGATAATTATTTATCATTATTCAACTTTCAAGAGATTAATTTTAATATTAATTAACTTAAAATAAAGTATGATTATTAGTAATAATTATATCACTTTTAATCAAAATTTATTTCAAAAATTATAAATATAATTTTGTTTTGAAATAAAAAAATAGATAATTATATTTAATACAAGTTAAGTATTATATTGATATAGTTTTATATCAGAATATCTACTACTCTCCCGTTTAATGAAGAACTCAAAAGGGAATGTAACAAAAACAAAGATTTGGATATTAAAACATACATAATCCATCAAACATATATAATGTGAAATCATGTATGATTTTTTTTTAATTATCATATATAAAATTAGTTTAACAACTTTTAGAAACATAAATTATTTAGTAGTTCAAATGCATAATTATGAATTATTGTGTACACGTTTTCTTGCTTGAGGGTTGAAAATTCCCAAAATTATACTAATAATATATAGTGTTTGGTGTCCACAATTCATCATTACGTGCCACACGTGTCACGTTTCATTTTCAGGATTTCATCACCATCAACCATACCATTTTATTTTTCCTTTCAGTTTTCAATATACTATTTAATATTATTTTATTTCTTTATACATGTTATGAAATAAAAATGCATTGTTGATTTTATAAGAATAAATCACTTCAATTTTTACCTTTTCCTCATGACATCATTTTATAAGTTATTTTCTGAATAAAACTAAATAAATATTCTTTTACATTATATTGGTATGGATTATTAAAAGTGACATAAGATTCGAAAAATGGATTAATTACCTGAAGATACAAGTTTTATTATTTTATCCTGAATAATAAATATTTTATTTGCTACACTAAAACACTTTTTTTAAAAAAAATATGGATTATTTAAGTCTACCAGATGAAAATAATCCCCCAATATTAAATTAATAATCAACAATTCCAAACAATTAATTAAAATATGAATTGTTTCCGGTTTTACTTTTATAATCTATAAGTAATTATTATGCTATTTGTGAACATATAAATATATTTCCTTATATTCAGTCAAAATGGTTGTGCTCTTAACAAAAATGATTTTTGTTTAGATTTAAATCATACAATATTGATTATGAGAGAAGAAAAACACTACAAAAAATATTCTTAAGTAAAAGAATAATTTTAGTAACTAAAAATAATTAAATATTATAATAATTAATTTAGATACTAATTTATAAATTATAAATAACTAAAATAATTTCTATCATAATTAAAAAATTATAACTAATTTCTAAATTAATAACTAAAATAATTTTTATTATAAATTAATATTTAATTTAGTCATTAACATTATCTATTAACATTTTGGTTACCAAAAAAAATATCTTTAATTATAAATATATTTTTATCATTAAAATTAATCATTATTTAATAATTTTATTGACGTGATATTTCAATAGTACAGATTTTATATCAATTATATGTATGATTTAACGGTTCGGTAAATTAATAAATATAATTTTCAAGATTCTTTTTTCAACTGTAGGAACATTTCTTGAAGAATAATTTGTCTCTATATATGGAAGAGTCTGAGAATTTTATTATAATTTATAATTCCATGGTTTTTTTTATTAACGATTGTTTTCTTAATTTAATTTAACTTTTCTTTAAGAATAATTTGTTTCTACCTGACTTAATCAAGAAAGAAAGATCTACCTAAATTTGTGAATTCTATTCTAATTTATAATAAATAAAAGACGAATAATTAATTTATCAACACACACATGTATATATGAATATGAAGACAGTGTGTTCAAAAT


Gene Sequence:
>Vu_00986(-)
GTATAAGTCTATCCAAATAGGAGGTGAGAGCAGCGTGACCTTAAACTGCATAAAGTTTGACTTGTTTACTCATTCATTAGCAATAATTTGGTGGTACCAGACAAACATGTCGTGAATGAAACATAGAAAAAAAAATGTGGTGTTGGATACAACATCTTTGATTCTCTGATTCGGTCCTTGAATCATAGGTGGCTCTTAGGAAGTTTCTCTTCTATGGACTCCCTCTTGGTCTCTAACCATGTTTTGGTCGTAAAATAGTTTCAACCATTCTTAGTTTAACACATTCAAATCTAAATTCCGCAGTTGACTTGGCAACAGCTTTATCCTTTTTGTTCAGAGTTCAGACTCATTCTATTTTCCTCTCCATCTATAAAAAATTGCAGATTCTGATTTTTCTGCATCAAGCTTTGCCTTTTTCTCTCTCTTCGTACTTCGTTGCATATTCTTCCTTGAATTCTCATCTGGGTTCATTCCTTTTGCATGCTTTGATCCAATCACTTTTCAAGTTGCGGGTGTGAGGAAAAACTTAAAAATTTCGTTCCTTTTTGTGTCACGGCCATGGGTTCTTGTCTGAGTAAAAGAGGGTCAGAGCCAGAAGAACACATTGGTTACAGAAATGCTGTTGGGGGAGCCCACAATCACAAGAGCCATGAACCCTTTGTCAGCCAATTTCCTGAGAAACATGCTCCTCAGGCTGCTTGGAGGGCCACTGTTCCTTCTCCAGGCCCAAAACATGCTCACAGGGCTGACACAATCACTGGGAAGCCATTTGAGGATGTTAAGCAGCACTATACTCTTGGGAAAGAATTGGGGAGAGGCCAATTTGGGGTGACTTATCTCTGCACCGAAAATTCAACTGGTTTGCAATATGCCTGCAAGTCCATCTCAAAGAGGAAGCTTGTGAGAAGAGATGACAAGGAGGATATGAGGAGGGAGATTCAAATTATGCAGCATTTAAGTGGACAATCCAACATTGTGGAGTTCAAAGGTTCTTTTGAGGATAAGAACTCTGTTCATGTGGTCATGGAGCTGTGTGCAGGTGGTGAACTTTTTGATAGGATCATTGCGAAGGGGCACTACAGTGAAAGGGCTGCTGCTGCAGTGTGTAGACAGATTGTTAACGTTGTTAACATCTGCCATTTTATGGGAGTGATCCATAGGGATCTGAAGCCAGAGAATTTCTTGTTATCCAGTAAGGATGATAAGGGACTTCTCAAGGCCACAGATTTTGGTTTATCAGTCTTCATAGAAGAAGGTAAGTCCGGTATCCTTTAAGTGGTCTTTTGCTATGAGAATCAAATTGTTGTGCATTCCTGAAAGATAAGTATGTGGATTCTGGCATCGCTGAGAATAAAATGTACATTATCTTCCAGTAAGAACATATACTATTTTCTTTTTCTTTTCTGATTAGTTCTTTACAGGAAAGGTGTATCGGGACATAGTTGGCAGTGCTTACTATGTTGCTCCAGAAGTTCTTAATCGTAGCTATGGGAAGGAAGCAGATATATGGAGTGCAGGAGTAATGCTGTATATCTTACTTAGTGGTGTACCTCCATTCTGGGCAGGTAAACTCTGACTTTGATGTGTTTGATGAAAGGATAATCTCCTTGTAGAGGCTAGCTTCATGCTATTTTGAACTTGATTAATTTTTTCATAAAATATGTGCTGTAGAGACGGAAAAGGGAATATTTGATTCCATATTGAAGGGTTATATTGATTTTGAAAGCAATCCATGGCCAAACATATCAAGCAGTGCGAAGGACCTTGTTCGCAAAATGCTTACAAAGGATCCAAAGAAACGCATTACTTCAGCTCAGGTTCTAGGTAGGTAACTTGTATATGTTTTATCCCATTGAAATTCAATAAACTATATCTGTATAGTGTTTAGTAGTTTGGCTTTCTTTCCCATATAGTGTTGGACGAGGTTGACTGCAGCATCCTTAAGATTTTTCTTGGTTAATGAATTGTAATTTCTCTGCTAATTGTTTGCTTGTTTTGTATTGTTTGAATAATCAGAGCATCCGTGGCTTAGAGAAGGTGGCAATGCTTCTGACAAGCCAATAGACAGTGCAGTGCTTTCCAGAATGAAGCAATTCAGAGCAATGAACAAACTAAAAAAACTAGCCCTCAAGGTTAGTCCAGCCACAAGATGCATGAAGAGACCACAGTGCTCTTTTATGCTTACTGTGTTTGAATTTGATGGCATATGTTACCTCTGTCTAAAAATGAGAGCTAACTGAGTGAATTTTGAATGATCTTTTAGGTCATTGCTGAAAATCTTTCTGAAGAAGAGATCCAAGGTCTGAAGGCAATGTTCACAAATATGGACACTGACAATAGTGGTACAATCACCTATGAGGAACTGAGGGCAGGACTGCAAAGACTTGGCTCAAAGCTAACTGAAGCTGAAGTGAGACAACTTATGGATGCCGTAAGTTGTCGAGTTCAACAATATCTGTCCTTCAATGTTTTTTCTATGTTCTTTCAAGCTTACACTCCTTTGTTTAATTTAGGCTGATGTAGACGGAAATGGAACAATTGATTACATAGAATTCATCACTGCTACAATGCACAGATACAGGTTGGAGAGAGATGAGCATCTTTATGGAGCCTTCCAATATTTTGATAAAGACGGGAGCGGGTAAGTCCGTCCATCTATTGTGCATTCAAACTTGTTTTTCAATCTGTCACATTATGAAAGTAATCCTTTTCTTTTTCCCCAGTAGCATTCTTAGCCTCAGTTCTTTGGACTATTGGATTGAGTTTTCAACAATGAACAAGATCATATACCATAAATCCTATTTCTTCCTAAACCAAAGACCACATTCATTACCAAGCATTAATTAATTAATGAATGTCTCTATTTAGAATTTGAAGATAAATGACACATGACCTTGGATTTTTTGTTTGATTCCATCACAGGTATATCACAAGAGATGAACTGGAAACAGCCATGAAGGAGAATGGTATGGGAGACGAAGCCACAATCAGGGAAATTATATCTGAAGTTGACACTGATAATGTAAGCCCGTCTTCTATTGACTCGCTACAACTTTGTATCAGTAATAATACTTTGACACACATTTAGATTCATTTGACAATATATTGTAAGAGTAAAATAGTCATTAAAAAATATAAACTTTTGCATGTCTAAAAGAAGAGTAATGGTACCATAACATATTTTTACATTAATTTAACATGGTTCAAGAATAAAATGGCAGAAAAAGTGTAAATTTTTGTATTTGTTTTCAAGAAAGAAGAGAGTAAAAAGTAACAAAAAGTAGTATCAAATGAATGTAAAAATTTATCTGTGTCAAAATATCATTTTTCCTAAAAGAAAAGAAACAGGGAAAGATAATGTCAAAATGAGTGTAAAAGTATCAGTTTTGCATGTCAAAGTATTATTACTCATTGTGCATTTCTAGTTCCATAGTTAACACTGAATTTGATGGTTTCTCAGGATGGTAGAATCAACTATGAGGAATTTTGTACAATGATGAGGAGTGGAACCCAAAAGGGAAAGCTATTCTAAAGGCTTCTAAAAGATATCATATGTAGACATGTAAAGTTGATGGTTTAGATTTGTGTTGAGCTACATGGAGACTTGGTTTTCAACCCTTATTTATCTTTTTGGTTTCCTTTTGGCTTTGAAGTTTTTGTATTGAGTTCTCATGTAATTTACCAGTGAAGGTAACTTTACAAGTTAGATTGTGCAGTTTGTTAAATTGAAAACCTCATCTGCAATTTGAGCAAAATCTGCAATTTATGCCAGGTCCATTTGATACTAC