Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01020 LG1 13266721 13268984 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of leaf senescence, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of leaf senescence, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, DNA binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, sequence-specific DNA binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
G/T 13267585 missense_variant p.Arg181Met
T/C 13267898 upstream_gene_variant
T/G 13268103 upstream_gene_variant
G/A 13268351 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01020.1
MDALDFFPHKSKETQDDDDEDDDNDNDNDIHHRQTLDFHVDTSLDLLTKNTGGNRSVEESDALETMDEKRFVALVTELHQVNAENQRLRELIDQMNNNSNAVRMQLIKITQKQHNLRKNGVDGEKEEMVPRSFLDIGVAEKDEASQQPSEEKLRESKSVVDLMHRCKGNEKDVEDKLDCGRESSKARMEGDQELSNKVPKLDQNSETLSMIKKARVSVRARSDSTMIADGCQWRKYGQKMAKGNPCPRAYYRCTMSTGCPVRKQVQRCAEDRSVLITTYEGQHNHPLPPTAQAMASTTSAAASMLLSGSMPSSDGLINPTILENASLPCSQNMATLSASAPFPTITLDLTQNPTNSSHHQRDPHNQLSLLSPLLAQKFMSVPKLFGHSLCDQTKLAGLHESQGMDAAAPSFANSLNAATAAITADPNFTAALVAAITSVMGSSHSNTSGTSNTTGDHHCNNNA*


CDS Sequence:
>Vu_01020.1
ATGGATGCCCTCGATTTCTTCCCTCACAAGAGTAAAGAAACCCAAGATGATGATGATGAAGATGATGATAATGATAATGATAATGACATTCATCATCGTCAAACCCTCGACTTTCATGTAGATACCAGTTTGGATCTCCTTACCAAGAACACGGGTGGCAACAGATCAGTTGAAGAAAGTGATGCTTTGGAAACTATGGATGAAAAGAGGTTTGTAGCTTTGGTAACTGAATTGCATCAAGTGAATGCTGAAAATCAAAGATTAAGAGAGTTGATCGATCAGATGAACAATAACAGCAACGCCGTACGCATGCAACTTATCAAGATAACGCAGAAGCAGCATAACCTACGGAAGAATGGAGTGGATGGAGAGAAAGAAGAGATGGTTCCGAGGTCATTTTTAGACATTGGTGTGGCTGAAAAGGATGAGGCTTCGCAGCAACCCTCAGAGGAAAAACTCAGAGAGAGCAAAAGCGTGGTTGATTTGATGCATCGGTGTAAGGGTAATGAGAAAGATGTTGAAGATAAGTTGGATTGTGGAAGGGAAAGCTCAAAAGCTAGAATGGAAGGTGACCAAGAACTTTCTAACAAAGTTCCTAAATTGGATCAAAATTCAGAAACCTTGTCAATGATCAAGAAAGCCCGTGTGTCAGTTCGTGCAAGATCAGACTCCACAATGATTGCAGATGGATGCCAATGGCGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCATGTCCAAGGGCCTATTATCGTTGCACAATGAGTACAGGCTGCCCAGTGCGTAAACAAGTACAAAGGTGTGCAGAAGATCGAAGTGTGTTGATCACTACATATGAAGGACAGCATAACCATCCACTTCCTCCCACAGCTCAGGCAATGGCCTCAACCACATCTGCAGCTGCTTCAATGCTTCTTTCTGGATCAATGCCAAGCTCAGATGGCCTAATCAATCCAACCATTTTGGAAAATGCTTCACTTCCATGCTCTCAAAACATGGCAACTCTCTCTGCCTCAGCTCCATTTCCCACCATCACTCTCGATCTCACTCAAAATCCTACCAATTCCTCACACCACCAAAGGGATCCACACAACCAACTTAGCCTCCTTTCTCCCCTTTTGGCTCAGAAGTTCATGTCAGTTCCAAAATTATTCGGACACTCACTGTGTGATCAAACTAAGCTTGCTGGCTTACATGAATCTCAGGGAATGGACGCTGCAGCTCCATCGTTTGCTAACTCACTGAATGCAGCAACTGCTGCTATCACTGCAGACCCCAATTTCACTGCTGCACTTGTGGCAGCCATAACATCTGTCATGGGAAGTTCACATTCAAACACCAGTGGTACCAGTAATACCACTGGCGATCACCACTGCAATAATAATGCATGA


Promoter Sequence:
>Vu_01020::LG1:13264721-13266721(+)
TTCAATATTATTTATTCTGTTTATCCAATTGAAATCAATTATAATTCAATAAGGTGGAATATAAGTAAATTAAATAATACATAAAAGTTTTATGTAGTATTTAAATAATTAAAAATAATAGCATGATCTATATTGCTGTAACACTTACGTAAGTTATAAACGAATTAGTTAAATTAGGAAATCTAATTTTAAAATAAACGATAAAGGAATTAAATAAACCAAAAGCTGAATTTGATTTTAAAAACCTATCAAATTAATTTCAAATCAACTCTGGAATAATGTAAATTTATATATATTTAAGGTTTAGTTGCTTACTTTAAAAATCTATCAAATTAACGGAATGGTTAATGTGGATGAAGTTGATAGTTTTTTTTTTTTTTAAATAGTAACCAAATTGACACAGCAATAAAACTATGAACAAAACTTATATATAAAGTCGCATAGACTACTTAAACTGACCATTCTGATCGGGTTCAGTGATGTTTTATCAAGAATTTAAAAAGAAATATTTAAATTTTGGCACTCGTATGATTCTGTTAAACGATATTTATATGAATTTTAGTATTAATTCAAGTTTAACTTGTTTTTAACTATTGTGATATTTTCACTAATACACATGTATAATATATATAATTTTGGGAATAGTATAAAATTCAATACAATGTATTACAATTCAGTAAATTTAAATTAAAATAATACGTTTGGGATATTACTAAAATATATAAATTATAAATTATTATTGTCATAAATTACTTCATGAGCCTTTTTCACACGTCTTTCAATATTGTTCTAACAATTTAAACATTTTATTGAATTTTTATCAAATCTTTCACATAGTATATCATATCTTATAAAGAGTTATTCATAAAATCTTACACATAATTCCTTTTGAGAACCTATATCCAATCATAGTTACAAATTTCAATAGTTTGAATGAGAAATTTTGTTATCCAATTGATATCTTTAGTTATATAATTTAAAAACTCACTTAGACTCTTTAAATTTTTGCCTAGACACTTAAAAATTTCAACTAGGCAGGAAATAACCGAATCTTGATATAATTCCTAACATAAGGAAGCTCCTGTTTGGTGATGTTTTATTAAGTATAATTATGTGCTAGTGCGAATTTTAAAACGAAATATTATTTAGTAGTTAGCAGTTGTGGGAATCTGTTAAATGGTATCTATGAGAATTTTCAGAAAAGAATTTTAGTATTAATTCAAGTTTAACTTGTTTTTGAACTATTGTGATATTTTCACTTATACATATTCAGTAAATCTAAATTAAAAAATACGTTTGGGATATATTGAATTTAATCGAAATTCAGATTTGATACTAAAAATCTATCAAATTAACTCATACAGTAGTTTTTTTTATAAACCACTTATTCATATTTCTATTCTTAAACACACAGTGTAATTCTCAGATAAGTTAATTATGAAAATATATTTACTTGAAAAATAGAATGACATGCAGAAAAGCGTTGAATTTAAATAAGAGATTGCATTTAGTCAGATGATTTCTCTGAAACCGATTCAAGACACGAAACTGATGAATATAATCTTAAAATAGTAAATTGCGCAGTCAGACATTAGTTAATAGCAAATAGTGTAAGTCAGAGTCGCTCTAATGTTCTGGTTCCTGTCCTTTCTCCCAATGGCTCTTCAGAAAAGTGACACGTGTGCATCACTTCCCACACTTCCCAAACCTTTGGTCTTAGTCAAAACAAAACCCCATTTTTTGTTGCCGACTCCATTGCATCTCTCTGCCTCTTTCTCTCTCCATTTTCTCTCCCTTTAGAAAACTTGTGGGCACAACTGCATGACTCTTCTTTGATACTCATTCAACAACTTTCTTTCTAACCAAGCACACACTTATGTAAGACTTCTTCAACAGACACATACATTATATATTTAATCAACATGGAACCCTCTTCCAATCATGACATTGCTCACCCTTCTTCACATCCATTCATGTCCTTCACAGGACACCATTCCTCA


Gene Sequence:
>Vu_01020(+)
ATGGATGCCCTCGATTTCTTCCCTCACAAGAGTAAAGAAACCCAAGATGATGATGATGAAGATGATGATAATGATAATGATAATGACATTCATCATCGTCAAACCCTCGACTTTCATGTAGATGTATGTGCTTTTTACATCCATCCATGCAAACTCATATATTTCTTCACATTTTTAAACCTAACCCTAGTTCGCTATGTGAAAATCTTATGTTTTTGTAATGTTGTTCATCTATAGACCAGTTTGGATCTCCTTACCAAGAACACGGGTGGCAACAGATCAGTTGAAGAAAGTGATGCTTTGGAAACTATGGATGAAAAGAGGGTAAGTGAATATTTGTGTCAGTGTTGTATATTAATGCAATTTCAGCACACAAAGTAGGCAAATTTTATAATATGTAATTAGTTTATTTATTCTTATGGGTACAGTTTGTAGCTTTGGTAACTGAATTGCATCAAGTGAATGCTGAAAATCAAAGATTAAGAGAGTTGATCGATCAGATGAACAATAACAGCAACGCCGTACGCATGCAACTTATCAAGATAACGCAGAAGCAGCATAACCTACGGGTAATTTATTTGTTTATTTATTTATGTATTTCTACAACTCGTCGATTATCAAAGAATATATACGGTGTAGAACATACGTATTGTTTTTTGCTTGGTTTTGTGTAGAAGAATGGAGTGGATGGAGAGAAAGAAGAGATGGTTCCGAGGTCATTTTTAGACATTGGTGTGGCTGAAAAGGATGAGGCTTCGCAGCAACCCTCAGAGGAAAAACTCAGAGAGAGCAAAAGCGTGGTTGATTTGATGCATCGGTGTAAGGGTAATGAGAAAGATGTTGAAGATAAGTTGGATTGTGGAAGGGAAAGCTCAAAAGCTAGAATGGAAGGTGACCAAGAACTTTCTAACAAAGTTCCTAAATTGGATCAAAATTCAGAAACCTTGTCAATGATCAAGAAAGCCCGTGTGTCAGTTCGTGCAAGATCAGACTCCACAATGGTTAGTAAACTAAATAATAAGCAGAAATGAAAATGGCAAATGCAACTATGTATAATATTGTGCATGTATTAGCACCAAGTTAATTATTTCACAAAAATTCAGTATATCTAATTAATGTGTTCTATGAAAGACCACTATGGATGATGAGAAATTAGGAGTTAATGTTGAGTTGGATGTGTAAAATATAATAGAAAGCAAATTTGATGGTCCAAAACGTATTTAGCTAGAAGCTTTTGCGACTTTCGATACAGTGATCCATCAACTAATAATATGAAACTTACGTTACTGGTATATAAATTGTTGTAAATTTTATGAGATTATAGCATGAAAATTCATATAATTTTAAAAGTTGATTAACAAATGAATCATATATGCAGAAATTATTGATTCAAGAGAAATTTCATGATTATAACAGATTGCAGATGGATGCCAATGGCGAAAGTATGGGCAGAAGATGGCAAAAGGGAATCCATGTCCAAGGGCCTATTATCGTTGCACAATGAGTACAGGCTGCCCAGTGCGTAAACAAGTATGCATGCTTCAAAACTGACTTACTTTTGCACTAAAATCATAAAAAAAAAAAACACACTTTTATCTCTAACATGAGCACATTATAAAGAAACAACGTCGTACACGAACAAGACATGTTATGTTTGTTGACAGGTACAAAGGTGTGCAGAAGATCGAAGTGTGTTGATCACTACATATGAAGGACAGCATAACCATCCACTTCCTCCCACAGCTCAGGCAATGGCCTCAACCACATCTGCAGCTGCTTCAATGCTTCTTTCTGGATCAATGCCAAGCTCAGATGGCCTAATCAATCCAACCATTTTGGAAAATGCTTCACTTCCATGCTCTCAAAACATGGCAACTCTCTCTGCCTCAGCTCCATTTCCCACCATCACTCTCGATCTCACTCAAAATCCTACCAATTCCTCACACCACCAAAGGGATCCACACAACCAACTTAGCCTCCTTTCTCCCCTTTTGGCTCAGAAGTTCATGTCAGTTCCAAAATTATTCGGACACTCACTGTGTGATCAAACTAAGCTTGCTGGCTTACATGAATCTCAGGGAATGGACGCTGCAGCTCCATCGTTTGCTAACTCACTGAATGCAGCAACTGCTGCTATCACTGCAGACCCCAATTTCACTGCTGCACTTGTGGCAGCCATAACATCTGTCATGGGAAGTTCACATTCAAACACCAGTGGTACCAGTAATACCACTGGCGATCACCACTGCAATAATAATGCATGA