Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01234 LG1 15010560 15013094 "PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic "
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, response to water deprivation, protein phosphorylation, response to water deprivation, protein phosphorylation, abscisic acid-activated signaling pathway, response to water deprivation, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, response to wounding
Cellular Component   located in   nucleus, nucleus, plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/T 15011282 upstream_gene_variant
G/A 15011981 synonymous_variant p.Phe184Phe
A/C 15012151 upstream_gene_variant
G/A 15012158 upstream_gene_variant
G/T 15012957 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01234.1
MGNCWGSQPHSEVTPTTTGNLSTATPGISQTISGSTTTSGSYTTTTTTTTTTTTTSGSGNSSVNSKFSVASGDQPYPTGQILPTSNLRIFTFGDLKAATKNFRADTVLGEGGFGKVFKGWLEEKGTSKGGSGTVIAVKKLNSESLQGIEEWRSEVSFLGRLSHPNLVKLLGYCLEETELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDSNRPSGQHNLTEWVKPYLHDRRKLKGIMDSRLEGKFPSKAAFRIAQLALKCLASEPKQRPSMKEVLESLERIQAVNEKPVEPKLRSNHTRQAHQAVHHRSPLKDGSY*


CDS Sequence:
>Vu_01234.1
ATGGGAAACTGCTGGGGTTCTCAGCCTCACAGCGAGGTGACCCCAACAACCACCGGTAACCTCAGTACAGCCACACCGGGGATATCTCAGACCATCAGCGGCAGCACCACCACCAGCGGCAGCTATACTACTACAACAACCACAACCACAACAACTACTACTACTTCTGGAAGTGGGAACAGCTCCGTCAATAGCAAGTTCTCGGTGGCAAGCGGTGATCAACCTTATCCAACTGGGCAGATCTTACCCACCTCTAATTTGAGGATTTTCACCTTTGGTGACTTGAAGGCTGCGACTAAGAATTTCAGGGCTGATACAGTTCTTGGAGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAGAAGGGCACGTCAAAGGGTGGAAGCGGAACAGTCATTGCCGTCAAAAAACTCAACTCTGAAAGCTTACAAGGAATTGAGGAGTGGCGGTCCGAAGTAAGCTTTCTAGGTCGCCTTTCCCATCCTAATCTTGTAAAACTTCTTGGTTACTGCTTGGAGGAAACTGAACTTCTTCTCGTCTATGAATTCATGCAAAAAGGAAGCCTTGAAAACCATCTATTTGGAAGGGGTTCTGCCGTTCAACCACTTCCTTGGGACATCAGGCTTAAGATAGCAATTGGAGCAGCTCGTGGTCTTGCATTCTTGCATACATCCGAGAAAGTAATTTACAGAGATTTTAAGGCCTCAAACATTCTGCTTGATGGGTCCTATAACGCGAAGATATCAGATTTTGGCTTGGCAAAGTTGGGTCCTTCAGCTAGTCAATCTCACGTGACAACAAGGGTGATGGGCACATACGGTTATGCAGCTCCTGAATATGTGGCCACAGGGCATCTATATGTCAAGAGTGATGTATACGGGTTTGGAGTTGTTTTGGTGGAAATACTGACAGGGCTACGAGCACTTGATTCGAACCGTCCAAGCGGGCAACATAATCTAACGGAGTGGGTGAAACCATACCTGCATGACAGAAGAAAGTTGAAGGGCATTATGGATTCTCGATTGGAAGGAAAGTTTCCATCGAAAGCTGCATTCCGTATAGCTCAGCTTGCTTTAAAATGTCTTGCATCTGAACCCAAACAGCGGCCTTCAATGAAGGAGGTTTTGGAGAGTTTGGAGCGAATTCAAGCAGTCAATGAAAAGCCCGTGGAGCCTAAATTACGATCTAATCATACTCGTCAAGCCCACCAGGCTGTGCACCATCGTTCTCCACTTAAAGACGGTAGTTATTAG


Promoter Sequence:
>Vu_01234::LG1:15013094-15015094(-)
ATCATACTCTTACTAAATTGTTGAATTGTGTTAATGAAATTGGACTCATATTTTTTTAATGAAATTGGACTCATAGATTGATTCGACTGACCTACCAATCTGTCAGACTATGTGAATAAAATTGGATCAGACTTCCATATTAAAAATGGTATCCCGGGAAACTTGTCCTAAATTTTTAACTTTTCAAGATTTATGTTTAAGATATTTTTGAGTCAAAAAATTACTTTTTAAGAACACTCAATTTAAAACATATATAAAAAATATATTCAAAATTATATGTTTCCTAATATATTTTGTGATCCGAAATATTCAATTTGAAAAATATTTGATATTTCGAATTAGATGTTTCAGAATGTATTTTTTAAAAGTTGTTTATATTATGTTTTTCTAAAATAAAGAAAAATAAGGATTTTAAATTTTACGAAGTACAAGAAAGAAAAAAAATGAGGTGGAGGAGGAAGCAGCCTGTTTGTAACTGTAACTGCATTTTTTTCATATATAAATAATGCAATTGCATCTTTGGTATGCATAATTAAATAATCGAATAACTTGAATAGCTATCTTCTAATTTTTACTCAATATATATTAAGAAAAAATATTATCATTGGATGAATTTGGTCACATCAATTAGAAATTCCAGAAGTGTAATTTTCTCATAGATATAGCAATTACAACAATAAAATATTTAAGCAACGCAGTATCTTAACTCTCGAGTCATTAAACAACGTAGAAGTTGATATTTTTTTCAGAGCCAACAAAGATTATCTTTATGCAGATAGTCACATTACTCTGTCGTTGAATTTGTTAGAAATCGAATTACAACTTCCATGGCCACGGTATGAACCTACCCAAAGAGATGATAGAATTGAATTGTTCTAGAATAACAATAGAATCGAACACTGAAGCACCCAACAAATCACGGTTGACCGAGAATATCCTTTTTTTTCCGACCATTATTAATTTTTCTATAATAAGATTTACGTCTTATAGAAGTAAATTTTAATAAATTAATAAATGAAGTAAAGTAGTAACCATATTTTGTTTTAGTGTCTATGTAGGGATTCATGTCTATTTCCCATTACTGACGAGTTACCTCAGATGTTATGACGCATACTGACGCATACTTGTATAGTTTTGAACTAAAAATTTATAGAAAATGGAGCAATCGCAATCTATATTCAAAGGCGCCAAAACTATGGTGGAAATTGGTGAAACGATTTCACACCGCAACGCAAACAACCAAACAGCGAACACGAAAGCGCGGAAGGGAACGCTGTGGGTTTCTTCAGTCAAACATTTGTTTGGTGTATGAAATGTGAGAGATGATTTTTTTATAAGTTTGAAATGAAATAGGATAGTTGGAGGCGTGTGCGTGTCCGATTTGTTTGAACAGAGAGAGTTGGTTGATTTGACGAAACAAAATAAAAGATCTCATTGTCACGAGAGTTGACTTGAAGACTAACGATGGATGATAGCCTCTTTCCCTTTTCCGTTAGATTGTTTGGTATGATAAGATTAAATATATTCTTTTTAGACTAACATGTTTATATATTTTGATATTTAGTATGAGTCGAAAATATTATTTGAATTAATATTATTAAATTAAAAAGTTATATTGATTTATTTTTAAATGTTGAAAATCAGAATATATAATAGTTTGGAAAATGAATTTTATTCTTAAAATATACTGATATTGATATTTTATTAAAAATATTTAAAATCAGTGTATGATATAAATCCAAATTTTCCATGAGAGAGAAAGACCGAGTCCATGACTTTATTTGTCAATAGCATATGAATTAATAAATCATGTTTGCATTCCATGGTCCATTACTTTTGCCTTTTGCTGCACACATACATGTCAATTCCATCCCATAGGTTCAGCCAAAGCTAATTTCAATTATTGGATGCAAAAGAGAGAAGACCAGGAGGAGGAAGCAACCAGGTCTGGTCTTCATCGATCGGAGAAGCCATAGAATTGTTCTTTCGCCACCGTTTCA


Gene Sequence:
>Vu_01234(-)
ATGGGAAACTGCTGGGGTTCTCAGCCTCACAGCGAGGTGACCCCAACAACCACCGGTAACCTCAGTACAGGTTTGTTCTTTACCTTTTCCTCTGAATACCTTTCATTTCTCGCATGTTTTCGCTTCATTTATGTTTCCCTCTTCGCTAATTCATCGCATCGCTGTTTAGCCACACCGGGGATATCTCAGACCATCAGCGGCAGCACCACCACCAGCGGCAGCTATACTACTACAACAACCACAACCACAACAACTACTACTACTTCTGGAAGTGGGAACAGCTCCGTCAATAGCAAGTTCTCGGTGGCAAGCGGTGATCAACCTTATCCAACTGGGCAGATCTTACCCACCTCTAATTTGAGGATTTTCACCTTTGGTGACTTGAAGGCTGCGACTAAGAATTTCAGGGCTGATACAGTTCTTGGAGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAGAAGGGCACGTCAAAGGGTGGAAGCGGAACAGTCATTGCCGTCAAAAAACTCAACTCTGAAAGCTTACAAGGAATTGAGGAGTGGCGGGTAATTCTTCGCGTGATGTGGATAACAATCAAACCCCTTTTACTTTTCTCCTCCCGCTTTCTCTGACATATCTTTTGTCTTATGTGATTTCTATGAAATTTTATGCATCTTCTGCTTGCCTCGAAAGTTTTTTGCTGGCTAGTGTCATGTTCTCCAGCCCAGATTTAAGCAAACACATGCTCTATTTGGAACTAGAATAAAAAAAATGTTTAGGCTAATTAAACAATAACTGAATCATTCCATGCAATTTCCCTTCCCTTTTATGATAAAGGCAAAGTGTAGCAGAATCAGCACACTGCTTCTTACTAATTTGATAATTAACTGCTTTGCGAAACAAAAGTCTGAGATCTCAATTTCGTATAGGTGCATTAAACTCTTGTTCTGTTACTTGTTTCATCAAACTGTTTAATCATTGACTTATAAATTGCCATTAAACTAATGATTCATTCATTTGATGCAGTCCGAAGTAAGCTTTCTAGGTCGCCTTTCCCATCCTAATCTTGTAAAACTTCTTGGTTACTGCTTGGAGGAAACTGAACTTCTTCTCGTCTATGAATTCATGCAAAAAGGAAGCCTTGAAAACCATCTATTTGGAAGTGAGTGCTTAATTAGATACGACTGTCTTGGCAAGTATATTATCAGTTCAAGCATGAAATAAAATGCCAAATTAAATGTATATTTACAGCTAAAAGCTACATTGTTTTAATTGTAGGGGGTTCTGCCGTTCAACCACTTCCTTGGGACATCAGGCTTAAGATAGCAATTGGAGCAGCTCGTGGTCTTGCATTCTTGCATACATCCGAGAAAGTAATTTACAGAGATTTTAAGGCCTCAAACATTCTGCTTGATGGGGTGAGCTTCGCAACACCCTGACAAATCTTAGCAAAATAAGCTTATATAATTGAAAATTAATTATTCCGTGAGTTAAAGTTACCATATGCATAAATCAACTCGTAGAAGCTCTCTTCTAGCTTTAAATTTTTAATTTTAAACTTGTACATCAACCGATTTTAGCTTTTGTAGAAATTTATTTATTTATTTTTTCTTGTTTTTCTTCCTTACAAGTATTTATCAAAGAAGTGTATTTAAGAAAGTATTTACCAGAGAAGTGTATTTAGGAAAGTATTTACTGAGATGTTTGTCTAAATACGCGTATATATTCACTGCTGCCATGTTATGACATATTGACACATGAATGTTTTTCACCTATTTTCTTCGGAAATCGTGTTAGTTTGGTATGTACCATTTGGTGCTCAACTTAATTAGTTTCTGTCATGCTACAGTCCTATAACGCGAAGATATCAGATTTTGGCTTGGCAAAGTTGGGTCCTTCAGCTAGTCAATCTCACGTGACAACAAGGGTGATGGGCACATACGGTTATGCAGCTCCTGAATATGTGGCCACAGGTAATGTAACTCTGTTCTAATATCAGTGCATATTAAGTAAAGCTTAATTTTTTCTCATTTCAAAACTCTTTGTGTAGTCCGATGTTATTTGATGCAACTGTATTGGGCTAAAAATTTAAATTGATTGTTGAAGTACTGCACCTTGAAATTGTCTTTGTTTATGATACAGGGCATCTATATGTCAAGAGTGATGTATACGGGTTTGGAGTTGTTTTGGTGGAAATACTGACAGGGCTACGAGCACTTGATTCGAACCGTCCAAGCGGGCAACATAATCTAACGGAGTGGGTGAAACCATACCTGCATGACAGAAGAAAGTTGAAGGGCATTATGGATTCTCGATTGGAAGGAAAGTTTCCATCGAAAGCTGCATTCCGTATAGCTCAGCTTGCTTTAAAATGTCTTGCATCTGAACCCAAACAGCGGCCTTCAATGAAGGAGGTTTTGGAGAGTTTGGAGCGAATTCAAGCAGTCAATGAAAAGCCCGTGGAGCCTAAATTACGATCTAATCATACTCGTCAAGCCCACCAGGCTGTGCACCATCGTTCTCCACTTAAAGACGGTAGTTATTAG