Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01276 LG1 15414532 15417286 PREDICTED: calcium-dependent protein kinase 29-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein autophosphorylation, protein autophosphorylation, protein autophosphorylation, peptidyl-serine phosphorylation, intracellular signal transduction, protein phosphorylation, peptidyl-serine phosphorylation, peptidyl-serine phosphorylation, protein phosphorylation
Cellular Component   is active in   nucleus, cytoplasm
Cellular Component   located in   plasma membrane, cytoplasm, nucleus, plasma membrane, plasma membrane, plasma membrane, plasma membrane, plasma membrane, mitochondrion
Molecular Function   enables   calcium ion binding, calcium-dependent protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity, protein kinase activity, calmodulin binding, calmodulin-dependent protein kinase activity, protein kinase activity, protein kinase activity, calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
T/A 15414798 downstream_gene_variant
A/G 15414865 downstream_gene_variant
G/A 15415285 missense_variant p.Thr370Ile
A/G 15415555 missense_variant p.Phe336Ser
G/A 15415698 downstream_gene_variant
G/A 15415752 downstream_gene_variant
C/T 15415851 missense_variant p.Ala306Thr
T/G 15415936 stop_lost p.Ter277Cysext*?
C/A 15415937 stop_lost p.Ter277Leuext*?
G/T 15415960 splice_region_variant&intron_variant
T/G,C 15416195 downstream_gene_variant
C/A 15416202 downstream_gene_variant
A/G 15416268 downstream_gene_variant
A/G 15416299 downstream_gene_variant
A/C 15416302 downstream_gene_variant
C/T 15416309 downstream_gene_variant
T/A 15416326 downstream_gene_variant
C/T 15416422 missense_variant p.Arg256His
A/G 15416522 splice_acceptor_variant&intron_variant
G/A 15416576 downstream_gene_variant
G/T 15416622 missense_variant&splice_region_variant p.Thr222Asn
A/G 15416738 synonymous_variant p.Cys183Cys
C/A 15416756 synonymous_variant p.Val177Val
C/G 15416771 synonymous_variant p.Val172Val
G/A 15416774 synonymous_variant p.Thr171Thr
T/A 15416776 missense_variant p.Thr171Ser
T/C 15416846 synonymous_variant p.Glu147Glu
T/C 15416894 synonymous_variant p.Glu131Glu
A/G 15416937 missense_variant p.Val117Ala
T/A 15416942 missense_variant p.Arg115Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01276.1
MGVGFSKVLTHTTDDEIPISSTDSAPQLTYKQPRKNLPFPRSLVPPPMPTQCSSQTGPVLGKPYVKIKHTYEMKQELGRGKFGVTYLCVEKATGISYACKSIAKKGPQEVENVRREVMILQHLSGQHNIVEFKGAYEDRENVHLVMELCSGGELFDRIVAKGRHSEREAATVMRQIVKVVDVCHFMGVMHRDLKPENFLFATKDEDAPLKLTDFGSSVFFHTGEVYKDIVGNAYYMAPEVLKRNYGKEIDVWNAGVVLYILLSGVPPFWAETEKGVFDDVLGVKLDMDSEPWPSTSDAAKDLIRKMLTYDPKERITAAEALEHPWLKEGGEASEKHSDSAVLSRMEKFKAMNQMKKLAMKVIAENLSEEETKGPRQMFNNMDTDGSGTITFEELKYGLSRLGSMPSESEIRQLLNAIGNDKNGTINYYEFVAATMDRHRLEMGGSLFKAFHYFDKDDKGYITRDELREAITVHQMGDEATIDGVFEDVDSDKDGKINYEEFMSMMRNEC*


CDS Sequence:
>Vu_01276.1
ATGGGAGTGGGATTCTCAAAGGTGTTAACACACACAACAGACGATGAAATTCCAATTTCTTCGACAGATTCTGCTCCTCAACTCACCTACAAACAACCTAGGAAAAACCTGCCTTTTCCACGTTCTCTTGTTCCTCCTCCCATGCCAACCCAATGTTCTTCACAGACAGGACCTGTTCTTGGGAAGCCTTACGTTAAAATAAAGCACACGTACGAGATGAAGCAAGAGCTGGGAAGAGGCAAGTTTGGCGTGACTTATCTGTGTGTAGAGAAGGCCACAGGAATTTCTTATGCATGCAAATCCATAGCAAAGAAGGGTCCGCAAGAAGTTGAGAATGTTAGAAGAGAAGTTATGATTCTGCAGCATCTTTCAGGGCAACATAACATAGTGGAATTCAAGGGAGCTTACGAGGATAGGGAGAACGTGCATCTGGTGATGGAATTGTGCAGTGGAGGTGAACTCTTTGACCGTATTGTTGCAAAAGGCAGACACTCGGAGCGTGAAGCAGCCACCGTGATGAGACAGATTGTGAAGGTGGTCGACGTGTGTCATTTCATGGGTGTGATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCCACCAAGGACGAGGATGCCCCTTTGAAACTCACGGATTTTGGATCCTCTGTCTTCTTTCACACTGGTGAGGTGTATAAAGATATTGTTGGAAATGCATATTACATGGCTCCTGAGGTTTTGAAACGAAATTACGGAAAGGAGATAGATGTTTGGAATGCAGGAGTCGTTTTATACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGCTGAAACCGAGAAAGGCGTGTTTGATGATGTTTTGGGTGTTAAGTTAGATATGGATAGCGAGCCATGGCCTTCTACATCAGACGCTGCAAAAGATCTGATCAGAAAAATGCTTACTTATGACCCTAAGGAACGGATTACAGCTGCTGAGGCCCTTGAACATCCATGGTTGAAAGAAGGTGGTGAAGCATCAGAAAAGCATTCAGACAGTGCTGTTTTAAGTAGGATGGAAAAGTTTAAAGCAATGAACCAGATGAAGAAGCTTGCAATGAAGGTAATAGCAGAAAATCTTTCAGAGGAAGAAACAAAGGGCCCCAGACAAATGTTCAACAATATGGATACTGATGGCAGTGGCACTATCACATTTGAAGAACTCAAATATGGATTATCCAGATTGGGTTCCATGCCTAGTGAATCTGAAATAAGGCAGCTATTGAATGCTATTGGTAATGACAAGAATGGAACAATTAACTATTATGAATTCGTTGCTGCCACCATGGATCGACACAGACTGGAGATGGGGGGGAGTTTGTTCAAGGCTTTTCATTACTTTGACAAGGATGACAAGGGTTATATAACGAGAGATGAACTTAGGGAAGCTATCACTGTACACCAAATGGGAGATGAAGCTACGATAGATGGAGTCTTCGAGGATGTAGACTCTGACAAAGATGGGAAAATTAACTATGAGGAATTTATGAGCATGATGAGAAACGAATGCTGA


Promoter Sequence:
>Vu_01276::LG1:15417286-15419286(-)
CTTGTTTTTTATATGAAAGGTTATAGCAGAAAACCTTTCAGAGGAGGAAATCAAGGGCTTGAAACAAATGTTCAACAATATGGACACTGATCGCAGTGGCACAATCACATACGAAGAACTCAAATCTGGATTGACCAAATTGGGTTCCAAGCTTAGTGAACATGAAATAAAGCAGCTAATGGAAGCTGTGAGTTCAGTCTCGTCCGAATTAATCTTTACAAAATACTTTTTCTTATACACCAAGATATTATAAGCAATGATACATATAATTTTTCCATCTCAGGCTGATGTTGACAAGAGTGGAACTATTGACTATCAAGAATTCATCACTGCCACTATAAACCGGCATAAACTGGAGAAGGAAGAGAATCTGTACAAGGCTTTTCAATACTTTGACAAGGACAACAGTGGGTCAGTACGAAGTTCATTAGTTTGATATCTGTTTAACTTTAGTACATTAGTAGTGTATTTGAATTGTGTATTTTCAATGGTTTTTGCTGAGTTTGCTCAGATATATAACAAGAGAAGAGCTTAGACAAGCATTGACTGAATATCAGATGGGAGATGAGGCAACTATAGATGAAGTGATCGATGATGTGGATACTGATAACGTATGATGTTCTTACATAGGTTATGTTAAAAGGTTGTGTTATCATGATGTAATGGTATGGACTAATGGTTGAGGTTTCCATTTGCAGGATGGGAAAATAAATTACCAGGAGTTTGTGGCAATGATGAGAAAGGGGATTCTGGATATTGATGAGAAGGAGAAACCACGATAACTGTTTTGTGTTGTGCTGTGTGCCATCAAAACAAACCGGTTTCTGGATTTTTCTTGCTGTTTGCTGCTTGCTGCTGATGATTGAATCACCTTTGAATGTGTGTATTTTCTTCATGGCATTCCCACTCTATGCCAAACTTTGTAAAGCTTCTATTGAATAAACTGCAATATGTGCAAAATAAATAAAACTATAATCCAAAGGCGTTCCTGCTATTGATAACTTTATCATTGTTATTTGGTACGAGAAATATTTAGAAAAAAAATGTTTTAAAAGTTTTAAAACTTTTCTTGATTCAGTTTTTTTTTAATGTTTAGAATTTCAACATGTATGTATGCAGCTTTTTTTTTAACAATCATATCCTTATATGTAATTATAAGATATACTTATAGTAGAGTATTAATGTTATTTGTAGGTGAAAATAATATAGTAAACTGAGTAGAAAGGAATAGTTAAAATAATGGAGAAAATTTTAAAACATTAAATATGTTAACTTTACCTATTCAATTCTTGTTGATATTTATACATGAAAAATGATTTTTTTATACACTAAACTTTTTATATTTATTTGATGCTATTTTTCATTATTTTTTACTCTATGGTTTCTTACAAAATATAAAATTTACACTTTTATGATTATTTTATCCTTATTATTTTTTACTCTATTGTTTTTTACGAAATATAAAATTTATACTTTTATGGCTATTTTATCCTTATATTTGTGTCAAATAACGTAAAAGTGTGTATGGTATCATTATTCTTTATACTTAACCAAAAAAACACCGAATACTATTTTTCTTTTTTAAATTATGACAAATTTAACATGACACTTATTACTTTTAGCTATTTCTATTTTGAATTATTAAACACATTTCCTATAAAACTAGGCAACAAATATAGAAAGGTTTAAAATTTTAAAAGAGACTCAGGATACTTAGATCATTTAAATAAAAATTTCAATACTATTCACAAAAAATATAAAAATCAAAATTTTCATAAAATATAAAAAAGTGTATAATTTAATTTTAACATGTAAAAAAGTATCATTTATTGGTTTTGCTAGAACTGATTGATTATCCAGACGGGAAGGGATGCTGATATTCTTGCCACTGATGGAAGTAAAGAAGAAAAGCAGAAAGTGGAAATGCCAAATAATCACGTTACAGAAAAGAACTTGTAAGGCAGAAACAGCTTCAGTTTGCCTGGGAGAAAGAGAGAGTC


Gene Sequence:
>Vu_01276(-)
ATGGGAGTGGGATTCTCAAAGGTGTTAACACACACAACAGACGATGAAATTCCAATTTCTTCGACAGATTCTGCTCCTCAACTCACCTACAAACAACCTAGGAAAAACCTGCCTTTTCCACGTTCTCTTGTTCCTCCTCCCATGCCAACCCAATGTTCTTCACAGACAGGACCTGTTCTTGGGAAGCCTTACGTTAAAATAAAGCACACGTACGAGATGAAGCAAGAGCTGGGAAGAGGCAAGTTTGGCGTGACTTATCTGTGTGTAGAGAAGGCCACAGGAATTTCTTATGCATGCAAATCCATAGCAAAGAAGGGTCCGCAAGAAGTTGAGAATGTTAGAAGAGAAGTTATGATTCTGCAGCATCTTTCAGGGCAACATAACATAGTGGAATTCAAGGGAGCTTACGAGGATAGGGAGAACGTGCATCTGGTGATGGAATTGTGCAGTGGAGGTGAACTCTTTGACCGTATTGTTGCAAAAGGCAGACACTCGGAGCGTGAAGCAGCCACCGTGATGAGACAGATTGTGAAGGTGGTCGACGTGTGTCATTTCATGGGTGTGATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCCACCAAGGACGAGGATGCCCCTTTGAAACTCACGGATTTTGGATCCTCTGTCTTCTTTCACACTGGTTATTACACCTTTCATGCACATTCATCCTCTTCGTTCTTTATCATCAGAACTTTTTCTTAGTCTAATTATTTGATAATGCTAAATGATTGTACAGGTGAGGTGTATAAAGATATTGTTGGAAATGCATATTACATGGCTCCTGAGGTTTTGAAACGAAATTACGGAAAGGAGATAGATGTTTGGAATGCAGGAGTCGTTTTATACATTCTCTTAAGTGGGGTGCCTCCATTTTGGGCTGGTAAGTAAAATGCACGCATCACTCAGTTTTGGTTCACAGTAGCACGAAGAAATATAAATCATCATTTAGAGCAATTGTTGTAGTAGCTAGCCTTGTTTATGATTCAGAAACTAAAGGATCAAATAAGAAATGTAGACGTCATTGCATTGTTGCATGTTTATTGTCTAACACTTAATAGGTTGTAAGATTCTTAACACGGTTTTTTTATATCATTTCTGTCATTGACAGAAATTTATTAAAGATTATAAAATTATGCAAGTCTTTGCTTCCTATTTGTTAACTCTGGTTCATGACTTTATGATTCTGAACTAAATTTCAAATCATTAATACGTTAGCAGCTTTCTGAAACGTTGATTAGTACATAAGCATATGTAGTTTTAGCTGTTTTTTTCTTGATTTAGTGACTTGTTTGTGGATTTCAGAAACCGAGAAAGGCGTGTTTGATGATGTTTTGGGTGTTAAGTTAGATATGGATAGCGAGCCATGGCCTTCTACATCAGACGCTGCAAAAGATCTGATCAGAAAAATGCTTACTTATGACCCTAAGGAACGGATTACAGCTGCTGAGGCCCTTGGTAAATTTGTGTTATTGTTTTTGTAGTTTTACTAGTTTCAGATAACAGTGATCGATGCTTTCATCACCCCTTTCCACACACCAGAAGTCTTTTGTAATAAGCAACGCAGAGTTTTAACTATTATCTCTCAGTTACACATGTTAATTAACAAACAGGGTTACCAACTTTAAATATTCAAGTAAATCACATTATGTGTTTGAACCAGAACATCCATGGTTGAAAGAAGGTGGTGAAGCATCAGAAAAGCATTCAGACAGTGCTGTTTTAAGTAGGATGGAAAAGTTTAAAGCAATGAACCAGATGAAGAAGCTTGCAATGAAGGTCCGTCAAATTTTTCAGTTGTGCATCAAATTTAATCAAATAAATTATCAAATACCACGCAAAGTGAAAGTTTCATTATAAAAAATCGTGTTACACTTTCTTGGTACGACAAAAATGAGGTAAAATACACTTTAACTAATAGAATTTGTTATTTCTGAACATGGAAGGTAATAGCAGAAAATCTTTCAGAGGAAGAAACAAAGGGCCCCAGACAAATGTTCAACAATATGGATACTGATGGCAGTGGCACTATCACATTTGAAGAACTCAAATATGGATTATCCAGATTGGGTTCCATGCCTAGTGAATCTGAAATAAGGCAGCTATTGAATGCTGTAAGTTCAGTTCATGGTAATGAGAAAAGAAATATTTAAGCTTTTTCTCTATTTATTAAGCAAGACTAAACTGTGTTATATGCTCTTTCTTCATCACGTGCACTGTCAGATTGGTAATGACAAGAATGGAACAATTAACTATTATGAATTCGTTGCTGCCACCATGGATCGACACAGACTGGAGATGGGGGGGAGTTTGTTCAAGGCTTTTCATTACTTTGACAAGGATGACAAGGGGTTAGTCTTCAGTTCATTAATTTTATAAGCTTTATAAATCTGTATTTTCTGGTACACAAATACAGATACAAGATTTTCGTCTATTTTGTAGTTTTGAATCTTACTAATTCTTCATTGATTGAAATAATTTTTCCACTTGAGTAGTTATATAACGAGAGATGAACTTAGGGAAGCTATCACTGTACACCAAATGGGAGATGAAGCTACGATAGATGGAGTCTTCGAGGATGTAGACTCTGACAAAGTGTGTTGTAGAGTTATTTTCTCCTATGTCTGCTCTTCATGTGAAATTGTGACTAACAGTAGAGTTGGTTTTGATTTTGCAGGATGGGAAAATTAACTATGAGGAATTTATGAGCATGATGAGAAACGAATGCTGA