Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01443 LG1 16985999 16990423 PREDICTED: protein BRASSINAZOLE-RESISTANT 2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, brassinosteroid mediated signaling pathway, brassinosteroid mediated signaling pathway, defense response to bacterium, transcription, DNA-templated, cellular response to brassinosteroid stimulus, brassinosteroid mediated signaling pathway, defense response to bacterium, UV protection, quiescent center organization, brassinosteroid mediated signaling pathway, brassinosteroid mediated signaling pathway, negative regulation of transcription, DNA-templated, transcription, DNA-templated, cellular response to brassinosteroid stimulus, transcription, DNA-templated, negative regulation of transcription, DNA-templated, brassinosteroid mediated signaling pathway, brassinosteroid mediated signaling pathway, defense response to bacterium, transcription, DNA-templated, cellular response to brassinosteroid stimulus, brassinosteroid mediated signaling pathway, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated
Cellular Component   located in   cytoplasm, cytosol, chloroplast, chloroplast, nucleus, chloroplast, chloroplast, nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, transcription regulator activity, protein binding, transcription regulator activity, protein binding, protein binding, RNA polymerase II cis-regulatory region sequence-specific DNA binding, protein binding, protein binding, transcription regulator activity, protein binding, protein binding, DNA binding, protein binding, protein binding, DNA binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, RNA polymerase II cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, protein binding
Pathway   B 09132 Signal transduction   C 04075 Plant hormone signal transduction [PATH:ko04075]
SNP Position Effect Amino acid change
A/C 16986160 3_prime_UTR_variant
G/C 16986185 3_prime_UTR_variant
T/A 16986223 3_prime_UTR_variant
G/A 16986295 3_prime_UTR_variant
C/G 16986351 3_prime_UTR_variant
T/C 16986430 3_prime_UTR_variant
A/T 16986454 3_prime_UTR_variant
T/A 16986455 3_prime_UTR_variant
T/A 16986475 3_prime_UTR_variant
C/T 16986581 3_prime_UTR_variant
A/G 16986597 3_prime_UTR_variant
A/C 16986712 3_prime_UTR_variant
T/G 16986751 3_prime_UTR_variant
G/A 16986780 3_prime_UTR_variant
T/G 16987035 3_prime_UTR_variant
A/C 16987086 3_prime_UTR_variant
A/T 16987115 3_prime_UTR_variant
A/G 16987124 3_prime_UTR_variant
A/C 16987253 3_prime_UTR_variant
A/T 16987298 3_prime_UTR_variant
A/G 16987301 3_prime_UTR_variant
G/T 16987353 3_prime_UTR_variant
A/G 16987354 3_prime_UTR_variant
T/C 16987393 3_prime_UTR_variant
G/A 16987421 3_prime_UTR_variant
T/A 16987480 3_prime_UTR_variant
A/G 16987509 3_prime_UTR_variant
A/C 16987553 3_prime_UTR_variant
A/G 16987645 3_prime_UTR_variant
A/G 16987674 3_prime_UTR_variant
T/C 16987692 3_prime_UTR_variant
C/T 16987704 3_prime_UTR_variant
A/G 16988016 3_prime_UTR_variant
T/C 16988088 3_prime_UTR_variant
C/T 16988443 missense_variant p.Ser281Asn
T/C 16988470 missense_variant p.Asp272Gly
G/A 16988473 missense_variant p.Pro271Leu
C/A 16988490 synonymous_variant p.Val265Val
A/C 16988563 missense_variant p.Val241Gly
A/T 16988567 missense_variant p.Trp240Arg
T/C 16988572 missense_variant p.Asn238Ser
G/A 16988640 synonymous_variant p.His215His
A/G 16988928 synonymous_variant p.Ser119Ser
G/A 16988931 synonymous_variant p.Pro118Pro
G/T 16988938 stop_gained p.Ser116*
G/A 16988978 missense_variant p.Leu103Phe
G/T 16989105 downstream_gene_variant
A/G 16989166 downstream_gene_variant
A/G 16989178 downstream_gene_variant
A/G 16989212 downstream_gene_variant
A/C 16989213 downstream_gene_variant
T/A 16989293 downstream_gene_variant
C/T 16989346 downstream_gene_variant
A/C 16989560 downstream_gene_variant
A/T 16989598 downstream_gene_variant
G/T 16989687 downstream_gene_variant
A/T 16989705 downstream_gene_variant
C/G 16989775 downstream_gene_variant
A/G 16989953 downstream_gene_variant
G/T 16990277 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01443.1
MTSDGATSAAAAAAAASRRKPSWRERENNRRRERRRRAIAAKIYSGLRAQGNYNLPKHCDNNEVLKALCAEAGWCVEEDGTTYRKGSKPPLANGAGSSMRNILFSSSQNPSPFSSSHPSPIPSYQVSPSSSSFPSPFRLDVDKDNVSNLIPYIRNASLSLPPLRISNSAPVTPPLSSPTSRNPKPIPTWESIAKESMTSFNYPLFAASAPASPTHRHLYTPATIPECDESDTSTCESNQWVKFQAFAPSASVFPTSPTFNLVKPVVPPGVPDNSIQEMRTSSEEIGVQVMPWVGERIHEVALDDLELTLGSGKVRS*


CDS Sequence:
>Vu_01443.1
ATGACATCCGACGGAGCTACTTCGGCTGCGGCGGCGGCGGCGGCGGCGAGTAGGAGAAAGCCGTCGTGGAGGGAGAGAGAGAATAACCGTAGGAGAGAACGAAGGCGACGAGCGATCGCGGCGAAAATATACTCTGGACTTCGAGCTCAGGGGAACTATAACTTGCCGAAGCACTGTGACAACAACGAAGTTCTCAAAGCGCTTTGTGCAGAAGCTGGTTGGTGCGTCGAAGAAGACGGAACCACATATCGCAAGGGTTCCAAACCACCTCTGGCCAATGGTGCAGGGAGCTCCATGAGAAACATTCTCTTTTCTTCTTCACAGAATCCAAGTCCGTTTTCTTCGTCGCATCCCAGTCCAATTCCTTCATACCAAGTGAGTCCTTCTTCCTCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGACAATGTATCAAACCTCATTCCATACATTCGCAATGCCTCTCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTGTCATCACCTACGTCAAGAAATCCAAAACCAATTCCTACATGGGAGTCCATTGCCAAAGAATCTATGACCTCCTTCAACTACCCTCTCTTTGCAGCTTCTGCTCCTGCTAGCCCCACGCACCGTCACCTTTACACCCCTGCCACTATTCCAGAGTGTGACGAGTCTGATACTTCCACCTGTGAATCTAACCAGTGGGTGAAATTTCAAGCATTTGCTCCTTCTGCATCTGTGTTTCCAACTTCTCCAACCTTCAATCTTGTTAAACCTGTGGTTCCTCCCGGTGTGCCTGATAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGATTGGAGTACAGGTAATGCCTTGGGTTGGTGAAAGAATTCATGAAGTGGCATTGGATGATTTGGAACTCACTCTTGGAAGCGGGAAGGTGCGGAGTTAG


Promoter Sequence:
>Vu_01443::LG1:16990423-16992423(-)
AACGTTGTCAAATATCATTCTGCAATTGAGAACCATGACTTCTTGGCAGCTTTGACCCACACAAAGAGAATATGGAAAAAGAAAAGTTTTCAAACACTCCCAAAAAGAAGGTAAAGAAAAAGCTTTTCGCCGTTCTTGGTCCAAATCGATGACGACATTTGAAGGGTCATCAATTTGACTAATCATAATATCTCTCTTTCCATTCAAAGAATACCACAATTTAATATTCTTTTCATCTTATATTTAATGAGTTAAAACAAAAGCAAAAAAACAAAAAATTTGATTAACTAAAATCAAGTAAGATTTGGGATTCGATCTATATTTAAATTTAAATAAATAATGTAGTAGTTAACAATGTGCAGAGTATTAATTAAATAACTTGCTAATTTTAGCAAAAATAAGGTGAAGTAATGGCCATGATGTGAATTATTAAGTAGGGCCTGGCCTAGGTAAGGTGCCTGTAGGCTCTTAAAAATATTTATAATTATTTAACAGAATAATCGGTATTAAAGAGTAAACCAATTTATTTTGCACAAAAATAAGATTTTCATCATATCTATTATGACTATCTCTCTTTTCATATGAAATCTTTTCTATTTTTTCTTTTTTGTTTTCTTTTCCTTTTGTATTATTTAGAGCTATACTTTTTTTCCCCTCTCTTTGATGGAAAAAGAAGTTACACCTTGTTATCTAGAGCTGAAAACATATTTTAAAAAATTAATATGTTGAAAAGAAACATTATATTTCAATTATAATAATTATAGTAATATGTTTTACTAATTTTAAAATGCTTGATTTTACTTTTCATTTTAAGGCTAACTAAATAATGGGTTAACCCTGAGATTAAGTATGATTTTTCTATTCGTTTATTCCTTTTTAACCATATATATATTTGAACACTATTTTATATATTATTCTATTAGAATGAATTTTTCCATAAAATAAAATAGAATTATGCATTCTAGTTTCAGAGAATTCTTATTTTACACCTATTTTTTTTATTAATTTTGTTGTTAGTTTTCTACACCTAATGCTTTATGTTGCGTTTTGTTTGAGTAGAAAAAAACACTAGAGAAAAATAGAAATATACTGAAAAATGTGTTGCTTAAATTCACAAAGAAGAAAAGAAAAATAATTTTCTCTTATTTGGAAGGGTGAAAGGAGTGAGTAAATGGAAATAAATAATATAAAGACAAACTTATTTAATTTTACTTTGCTGAAGTAACAAGCAAGTAAGAAGTGACAGTAATCTGCACTCTGCAGAGTCCGAATACTTCCACTTTATCTGAAAAAGTCACAAAACAGAAGCTATATCCATTTTTTTATGAATTTTCTTTTCAAATTTTAATCATTTCTCGTACTCTGTCCATTTTAAAACTCCTCAAGGTAATTATTGAACAAAAGAATAGTTGAAAAATATTTTTAGTCTGAAATTAATATAATTAAATGTTATTGATATACATTTACAATATCTTTAATTAATTTACGCATAGTTTTATCAGTTTTTAAAGCTAAAGTAATACAATAATAGTAGTTGGTGTTAATAGTAAGTACATGCACTTATCCTTTTAATATCAATTATTGATTTAATTTTATAATATTCTTAAATGCAATAAAACAAAACAAAAAGAGTTTGATTTGCTTTTTTTTTTTCAAGTTAAAAAATAAAGAATTGTAATAATACATTTGGATTTAAATATAATTCCTTATTTTTCTTACACAGATGAATCATTGTGTTTTGAATCATTGATGATCTTCAGTTGTGGGTCCCACTCCCATTAATAATTAGCTTATCAGAGAAAGCAGTCCACATGGAATGCAATACGTCCACGCGTCACATCGCTGATTCCGCTCGGGCCCACTTCACAACCATCGGCAACGCCGAACAATCCCAACCGTTCAATCTCTCATCAAATATTAAATCTAACAAAGCTCGCACATCGAACCCACAATCTTCACTGAGCCTTTTCCGCACTGGAACATTTTCCCCGCCTGAAATT


Gene Sequence:
>Vu_01443(-)
ATCTTTATCAGATTCTTCGTTCTTTCACGCATCCAGCGAAGACAATTGGAGAAAAGCGCGATCCTCGTGACTCGTGAACTCGTTACGTTACACTCCAATCGGGTTTAAATACCCTGCGACGCGCAAACGCTAGTCACCATCGCCGGCAAATGACATCCGACGGAGCTACTTCGGCTGCGGCGGCGGCGGCGGCGGCGAGTAGGAGAAAGCCGTCGTGGAGGGAGAGAGAGAATAACCGTAGGAGAGAACGAAGGCGACGAGCGATCGCGGCGAAAATATACTCTGGACTTCGAGCTCAGGGGAACTATAACTTGCCGAAGCACTGTGACAACAACGAAGTTCTCAAAGCGCTTTGTGCAGAAGCTGGTTGGTGCGTCGAAGAAGACGGAACCACATATCGCAAGGTAATAATTCAAATCGAAACCAATCACGTACATTTTACCTGTTACAGCGTTACCGGATCTTACTTTTGAATCTCAATCAAACGATCGTTTAAATTTCCGTCCATGCTGCATTGCGAATTTGTAATCAAGAAGTGGAAGCGACGAAGTACAATTACTTATCGTTCTGGTTAAACGGAGATTTCTAACTTAATTGTCGGATGTTCTGATCCTTAATACTACTGCGTAAATGCGGAAAATTTTATAAGGAGTGATAAGTCTCGGCTTGTTGATGTACTAAAACTGATCGAACTTTGATGCTCTAGTTGTGTGTAAGATGTTGGAATTAGCAGTAGCTAACTTAATTGTGAATGGAAAAAAATGAATTGTGTGTGCACAGATATTAATGTATGATTTTTTTCATCTCCTGAGATTACTGGAGTTTTGTTCACTTTAGTTTCTTATTATTTATATCTATTTTAATTTATTTGAGATGAAAAATATTCTTTGCAATCTCTGTCATGATGTTGGAAAAATAGTTGAAACTTGTAAAATGTTTCTTTTTATCTGAAGAATAACTTATTATTTTAAGATAAAAATAATTTATTTTTATAATTATGAAAACTTGTTATTTATAATAATTTTTTCAAATGTAATTCACCCCTATAAATGCTTTCCTCTTATGTAACAAGTGATAGCTCCCAGAGAAAATTAATTATCTTTAAGTTAAAATCATTTTTCGGTAATTTTAAAAAAACTTATTCTAAATATTATTGAAATAAATTTATTTCTGCTTCGATTTCATACACACCCGGTGTCAATGTGATTTTTTCATCAACAGCTTAGACTTGTAGAGTTTCTCACTTTGAACACTAAGTTGTTGGTGTTAATCTGAACAATTTGTGACAGAATGATATGAACTTATGATTTTCTCTTCACTCTGCAAACTCTTAATTGTTGGTGTTAATGAGATTGATTTGCAATGATAACGTAGTTTGTGTTTTGGGTGAACAGGGTTCCAAACCACCTCTGGCCAATGGTGCAGGGAGCTCCATGAGAAACATTCTCTTTTCTTCTTCACAGAATCCAAGTCCGTTTTCTTCGTCGCATCCCAGTCCAATTCCTTCATACCAAGTGAGTCCTTCTTCCTCCTCTTTCCCAAGCCCGTTTCGGTTAGATGTGGATAAGGACAATGTATCAAACCTCATTCCATACATTCGCAATGCCTCTCTGTCTCTTCCTCCTCTGAGGATATCAAACAGTGCCCCTGTGACGCCGCCTCTGTCATCACCTACGTCAAGAAATCCAAAACCAATTCCTACATGGGAGTCCATTGCCAAAGAATCTATGACCTCCTTCAACTACCCTCTCTTTGCAGCTTCTGCTCCTGCTAGCCCCACGCACCGTCACCTTTACACCCCTGCCACTATTCCAGAGTGTGACGAGTCTGATACTTCCACCTGTGAATCTAACCAGTGGGTGAAATTTCAAGCATTTGCTCCTTCTGCATCTGTGTTTCCAACTTCTCCAACCTTCAATCTTGTTAAACCTGTGGTTCCTCCCGGTGTGCCTGATAACTCAATCCAAGAGATGAGGACGAGTTCAGAAGAGATTGGAGTACAGGTAATGCCTTGGGTTGGTGAAAGAATTCATGAAGTGGCATTGGATGATTTGGAACTCACTCTTGGAAGCGGGAAGGTGCGGAGTTAGGCTGCTAGCAGAATTATCTCATATGGGTTAAGTGAAAATGAGATCACAGGAGTTTTTTGCTGGTTGGTTATTGCTCAACCTGGTGTTAGAGATGGAGTTAATAGCTACCTCATCCAGAGTCGTTGGTGCAAGCAGTTTATCGGGAAGAGACTGGAGTTATTATTGGGAACTGGATTTATCTGATGCTGTGGGCATTTTATGGAGAAAATGATCTCCTTCCATCCATGGCTTGGGTAAAATGTAGAAATGAGAATTTCACCTCCTCCCTTCGTGGTTAAATCAGCTATTGTTCAAAAAGGCTCATCAAGCCTATGTGCTAAGTGTTAGGTGCTGTGGGTGATTTGAAATTGAAATTTCAGGTTTTATCAAGTTTATTGTCTGTCAAAAGCTCACAAGACCTGCTTATTTGTAATGTTACATTTAAATTTTGTTGTTCTTCTTTATGTTCTTGTTGTTCTTTGTATCAAATAGTTTGTATGTTATTTTTATTTTTGCCGACAGGTTTTGTAGTTAGTGCAAAGTCAACAATTGGCTCTATCGTCCTTCTACCTTATTGACCCCTTTGATAAGTTCATGAGCTCAAAGCGGCATGAACTATGGTATTCAATATGGAATTGACACTAGTCTATGCTAATGAAGTCATGTGGTACTTTGGGGTGTTGTTCCCTGGTTAGCGGATTGTATAATATGTGATGAGTTGTGCAGGAGATGTCTTTGGAAAGAAAGGCAAAGTTCCATTAATGTGCCTTGGGTTTGCTGTAATATTCTCCTTCTGATTTTTCAATTCAGAATGTTCCTAATGTAGTCTTGGGTTATTTATTTGTTACTTTTAAGTTTTATTTTATTATCATATAATTTACGGTGATTCGGGATGTGTTGGTAGTTTGGATCTTTTTTGGTTGGGTCTTTCTTCCTTTGCAGCCTAGTTCCTAGCCCTTGAAGGTGTATAATAGCCAAATATTGGAATTGGCCTTACTTTTCTGCAACAAAGCACATTTGATGAGGAGGATACACCGGAAAATGTTGTTCAAGTTATATATGTTGAGATCATTGATCTTGAATTGGAACCTGCGAATCCTTTTTGGCTAGTATCATATGCAGAGCAGAACCTATTGGATGTCTGCAACGAAGAACAGAAGATGTAGATCCTCATGGTACCTATAAACTATGGCAACTGTCGGAATCTCTTTAAACACTCATGGGTGATGATGCAGCCTGTGCCAGTTCATCGACTGTCTTGTTAAATTTACCGTGATGATAATTGGTATGTGTTTACTTTCCTGTGTTTGCATTGACTCATCTTTTCCCGCAAGGAATTGTTTTTCTTTGTTTATCAGTGATTTAAACTTATAATATTGATTGCAACGGTAGTGTGCAACGACTCTCCCTTATATTTTTTAATAATGAAGATCCTTTGGCTCCGAGATGCATTGGTTTAAACTATTAACTCCTAATCCAAAGGTGTGCATCTTACTTGATATAATATTTTTTTGTTGTCATTTATGGAAGACTGATCTCGTACAGATTGGCAATCTCATTCCAGGAAATGGTTACATATAAAACTTAATACTCAATTTCAATTATTTTTATGTCTTGATAGGCAATCTCATTCACTTAATACTCAATCTCATTCCATGTGCGAACCTTCTCATGTATAATTTGCTAGAGAAATTGTGGCTGGATGGATTGCCTGCGCAAATGAACCAATTAGCTTTCAAGATTCTGGGTTTGTTAGGTGAGACTCAAGAGAGAGAAAAAAACTTATTTTATAAATTAAATTATTTTTTTGCTTACTTCATTTGAATGATTTTTCATTAACTTTAATCAAATTGGATTTTTAATTAAAATATATGCTAATATTAACTTCGAAGAGAAATTATTTTTTTTTTCATTTTACTTTTTAAAAGTTTTTTTAAGAAATTTCTTCGAAATAAATCCTTTGTCAGAAAGGTGCATCAATGATTCTTCAGAAAAGAGATTCCGTGCTTGGTGATCTCTTGTCATTTATGAATTTTCCAGTGTCCATTTCTCTGCCCTACTTTATTCATTTTCTTCTCTGTGCATGAGTAACTTTGGTTTCTTAGCAAGGGAAGAAACCAAAATATACTGAAGCTTGCTTCGACTGTCAGATGGTGCCTTTAAACATTGCCAGTGACTTCTAATTTCTTGGATATGTAATTATTATTATTATTAATATTATTATTATTGTTGTTGTTTTGTTGTTTTTTTTGTCAAATATCTGTTTGCAAGAATTAAACCAGAGTTTTGTTGTAGGAAACAAATTATATAGAAGAAGGAATTTCTAACAATGCATTAAATTATTGTATCTTGTGGC