Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01899 LG1 22755203 22755763 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   apical cell fate commitment, longitudinal axis specification, cotyledon development, embryonic pattern specification, cotyledon development, cotyledon development, cotyledon development, apical cell fate commitment, apical cell fate commitment, apical cell fate commitment, cotyledon development, apical cell fate commitment, longitudinal axis specification, cotyledon development, cotyledon development, longitudinal axis specification, longitudinal axis specification, apical cell fate commitment, embryonic pattern specification, cotyledon boundary formation, apical cell fate commitment, longitudinal axis specification, cotyledon development, positive regulation of cell population proliferation, cotyledon development, cotyledon development
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
G/T 22755241 synonymous_variant p.Arg111Arg
C/A 22755248 synonymous_variant p.Leu108Leu
G/A 22755258 missense_variant p.Ser105Leu
C/T 22755287 synonymous_variant p.Val95Val
A/G 22755288 missense_variant p.Val95Ala
G/T 22755297 missense_variant p.Ala92Glu
A/G 22755326 synonymous_variant p.Asp82Asp
C/T 22755349 missense_variant p.Val75Ile
A/G 22755350 synonymous_variant p.Pro74Pro
C/T 22755356 synonymous_variant p.Leu72Leu
G/A 22755358 synonymous_variant p.Leu72Leu
C/T 22755361 missense_variant p.Asp71Asn
T/C 22755369 splice_acceptor_variant&intron_variant
T/C 22755371 splice_region_variant&intron_variant
T/C 22755374 splice_region_variant&intron_variant
C/T 22755385 intron_variant
A/G 22755395 intron_variant
A/C 22755404 intron_variant
A/C 22755405 intron_variant
A/G 22755422 intron_variant
T/C 22755423 intron_variant
G/A 22755475 intron_variant
G/A 22755641 synonymous_variant p.Val41Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01899.1
MSDIDTERYTSQRWRPTDDQVKMMMNVFNYGVTHPSRAQIVEIASRLRIFGEATKYNVHCWFNNHSNRLLDLFPVPIIIEDDRDERQLPPPAPPVFRGFHIRPPSTELSLRPPQPAREFFFH*


CDS Sequence:
>Vu_01899.1
ATGAGTGACATAGACACAGAGAGATACACTAGTCAGCGCTGGCGTCCTACTGATGATCAGGTCAAGATGATGATGAACGTTTTCAACTATGGGGTCACACACCCTAGCAGAGCCCAAATCGTCGAGATCGCGTCTCGACTTAGGATTTTCGGAGAAGCCACCAAATACAACGTGCATTGCTGGTTCAACAACCATAGCAATCGGCTGCTGGACCTGTTCCCTGTTCCGATCATCATTGAGGATGATAGAGATGAACGACAACTCCCTCCACCAGCGCCTCCTGTGTTCCGCGGATTCCATATCAGACCTCCCTCGACGGAGCTGTCTCTTCGACCACCACAACCAGCTCGAGAGTTTTTCTTCCATTGA


Promoter Sequence:
>Vu_01899::LG1:22755763-22757763(-)
TTTGTGAAAGTGGTTACCCCAAGCTCGCCTTCTATTTCAACTACGTTACCTTCGGCCTTTTGTGGGTTTCATGCCTGAAGCCTGCCCCTCAGGATAGAGTGTAATTTGAGGAAAGACCAATAAGGAGGGAAAGTTTGTGCCTCTGGAACTCTTTGTTGTGGTCGTTGTGCGCACGAATCTCCAAGGCTTTGTAAAGCATTCAAGGCCTCTAAGATTTGACTTATTTGTTCCTTCAACTGTTGGATATCGGCCTTTATTCCCTCTTGAATTTTTCCTTGGTTCTCCATGGTTTTACCACTGGTTCGTGTCCTTTAGGGTGTTTTGGAGACTTAGCCGTATTATTATTTTAAACTGAATTTCATTAGATGAAATAAATTGAGAAAAAAAAACAGAAAGAAAAGCAAGGAAAGACAAAGCAACACAATTACTATAGTAAGAAATTATAAAGATGTGAAAACATCGCCAAATGTATAAATCTGGAAATTAACATGAATCAAAGTCAATAGGACAGTCCACATGTGAGGTATGTAAAGTCACGATCAATTATCACGAGCCTCAGCCATCACACTCTTCATTTCTCTTCTCAGTTTCTTGCAATAATTGAGGAAAGCTTCAACCTTCTTCGGTGGGTTAAAGATCGACAATGCAGACTCAGCATCAGCTAATAACTTAGGGACATCTTTAATGGCTTCATTTGCAAGGGAAGCTAGTTGTGAGAAACTTCTCCTCCAGTTTTCTGTAACGCGTTCTTGTTCAACGGTATACTCCTTCATCTGATACATCAACTCTTCTTTGATTCAGCCCGATGCCAACGTTCCTTCTTCAGTTTTGTTACCGCTGATTTTGCCTGTTGCCTGGCGTCGTTCATTCTAATATGCATTTTGAGCAGTTCCCCTAGCGCTTTTTGCTTGTCCTTTTGAAGTGGTCACACAATTCCTTCGTGACACGCCATGATGTCTCAATTATACCATATTCCCGGTCTTTCAAGGACAGCTCAATGTTGACCGCTACCAGCTCCTGCTTTTGTCTTCTTAACCACTCCTCGCATGCTTTGCTGTTTTCCTCATTATCTTGCTTGAGATTTACATAATCATGTTGTAGGTTCTGAAGATTACTGGTCAACTTGATATTTTCTATTTTCATTTGCTCGAGTTCTGCCTTCAACAGTTCTACTTCCTCATTTTCATCCTCATGAAACTGTTTTCCATAATCTAGGTTAGGAGGAATTAACTTGAAAGTCAATTTCACTGTCCTAACCCTCTCTGCAATCCAATGGCGGTAAGGAATTCCTTCACCAATGTCGCAACCGGGATCGCGACGGGACGACGATCCGAAGAATAAAAAAAACGAGTTTGAAAATTCCTTCACTTAAGTTCTCCGTTCTTCCTTTCTTTTATGCTTTTCCTTCCCTTTCCCTTTCATGTTTTTCTTTTCTGCTTTTCCTTTCCTTTGAGCTTTCTATTTTCTTTTCTGCTTTCCTGTTTTTTCTTTCTTATGCTTTCTGCGTTATTTACTTTTGCTCCTTTATTTGCTTTCCTCTTCCTCTTTCATTTTTCTTAAAAAACTCTAAAAACACACTGTCTTAACAAAGATAAGGGGTATATAGGCTGGAAACCAGACGCTAATCTCCCTTCGTTTGAAGGTATGGCAGAGACAATCGGGTAGAACAACGCCACGTACCCCATAAAAACAGAAAACTTAAAAAGAGAATTTATTTGTATGAACCGGACATGGACAATATGGACATGGATGTTATTTGTATGAACTGGACATGGACAATTTGGACGTAGATCCGTTTAGGAACCTTTGCGAGGATCATGAAACAGATCTGAGACCAGACACTGAGACGTCAAAGACTTATTGGACCGAATAAACCTAAAAGGAAACAAAGACAAATAAAGAAAACAACAAGAACTAATGATCTAATATTGTTATGCTATTTGTTTTGTTTTTGTTCTTTTTACTTTTTTTTTTTGTTTTAGAATACTTCGAGAGGAAAG


Gene Sequence:
>Vu_01899(-)
ATGAGTGACATAGACACAGAGAGATACACTAGTCAGCGCTGGCGTCCTACTGATGATCAGGTCAAGATGATGATGAACGTTTTCAACTATGGGGTCACACACCCTAGCAGAGCCCAAATCGTCGAGATCGCGTCTCGACTTAGGATTTTCGGAGAAGCCACCAAATACAACGTGCATTGCTGGTTCAACAACCATAGCAATCGGGTCAGGCGCCTCTAAATGGAGATAGACCCTACAGGCACCATCTTTTCTATGCTGCCGAACTACATGTATGGTAAGAACCCTGGTCGTATCCTTATTGAATTTTGCTTCCTCTTCTATTATTAACAATTTTTGTTTTATTTTATTTTTTTTTTTTTTAAAGAATATGACTGGGTGGTCATGAGGGCACCAAAGCTGCTGGACCTGTTCCCTGTTCCGATCATCATTGAGGATGATAGAGATGAACGACAACTCCCTCCACCAGCGCCTCCTGTGTTCCGCGGATTCCATATCAGACCTCCCTCGACGGAGCTGTCTCTTCGACCACCACAACCAGCTCGAGAGTTTTTCTTCCATTGA