Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_01976 LG1 24036421 24040753 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, plant organ formation, shoot system development, protoderm histogenesis, plant epidermis development, protoderm histogenesis, protein autophosphorylation, protoderm histogenesis, protoderm histogenesis, shoot system development, protoderm histogenesis, protein autophosphorylation
Cellular Component   located in   extracellular region
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, kinase activity
SNP Position Effect Amino acid change
T/C 24036565 missense_variant p.Lys520Glu
G/A 24036859 stop_gained p.Arg422*
G/T 24037097 downstream_gene_variant
C/T 24037129 downstream_gene_variant
T/A 24037182 downstream_gene_variant
A/T 24037183 downstream_gene_variant
T/A 24037235 downstream_gene_variant
A/C 24037294 downstream_gene_variant
G/A 24037299 downstream_gene_variant
C/T 24037300 downstream_gene_variant
T/C 24037334 downstream_gene_variant
A/T 24037355 downstream_gene_variant
G/C 24037529 downstream_gene_variant
G/C 24037530 downstream_gene_variant
G/A 24037676 downstream_gene_variant
C/T 24037697 downstream_gene_variant
G/C 24038288 downstream_gene_variant
C/T 24038413 missense_variant p.Val250Ile
A/T 24038641 intron_variant
A/G 24038645 intron_variant
G/C 24039016 intron_variant
A/G 24039369 missense_variant p.Tyr190His
C/A 24039437 stop_lost p.Ter167Leuext*?
C/G 24039446 missense_variant p.Cys164Ser
A/G 24039657 intron_variant
C/G 24039815 intron_variant
A/T 24039829 intron_variant
A/T 24039861 missense_variant p.Trp94Arg
G/A 24039876 missense_variant p.Arg89Trp
C/A 24039934 intron_variant
T/A 24039959 intron_variant
A/T 24040210 intron_variant
G/A 24040382 synonymous_variant p.Thr60Thr
T/C 24040384 missense_variant p.Thr60Ala
G/T 24040545 synonymous_variant p.Pro31Pro
T/A 24040591 intron_variant
G/T 24040630 intron_variant
T/C 24040668 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_01976.1
MERILNGNESLLPTRQRWLLEKELNSVSMNVPFASSERAKTLLLKPSRQSLSQGPIVTPRPKLPHYDHHHHSGKSYPVVPSPYKDPGSHGLLSYGMVGLKACSQICTDPFTATPFGSPCGCIFPMKVRLVLGVAPLVVFPVITELEIEIASGTYLKQSQVRIIGVSADNQNQWRTIVDIDLVPLGEKFDNTTALLLYERFWNKKVHLNRSLFGDYSTLYVAYPGIPSSLPPGYQIGSSPLPSNPLVGLCLSLKDSRPVIGLESMLSGRIMSSRSMSLVSAITASILSVKTFSFSELEKATDKFNSQRVLGEGGFGRVYSGTLDDGNEVAVKLLTKNGQNRDREFIAEVEMLSRLHHRNLVKLFGICIEGRRRCLVYELVYNGSVESHLHGEENLVTWARPLLRYREGLEKVVDPFLAGKYDFDEMAKMAAIASLCVHPEVTQRPFMGEVVQALKLIYNDTNESEKESLCHESDFGGDLVFSDSSWLDGEGVTPTLTYGPESSLITMDYSSGLLEMEKGTSSLNADETSLPIRHGNRSGPLRTARGKPSFTKLTRSRSDHVVSFQACL*


CDS Sequence:
>Vu_01976.1
ATGGAAAGGATTTTAAATGGAAACGAAAGTCTTTTGCCTACTAGGCAGAGGTGGCTACTTGAGAAGGAGTTGAACTCAGTTTCTATGAATGTCCCATTTGCTTCATCTGAACGAGCTAAGACATTGTTACTTAAACCTTCTAGGCAATCTCTGTCTCAAGGTCCTATTGTGACTCCAAGACCAAAACTTCCTCATTATGACCATCATCACCACAGTGGTAAATCTTATCCTGTGGTTCCATCCCCTTATAAAGACCCAGGTTCTCACGGTCTGCTGTCTTATGGTATGGTTGGCCTGAAAGCTTGTAGCCAAATCTGTACTGATCCATTCACTGCAACTCCTTTTGGTTCACCTTGTGGCTGTATATTTCCCATGAAAGTCAGACTAGTACTGGGTGTAGCTCCTCTGGTTGTTTTTCCAGTCATTACTGAGTTAGAGATTGAAATTGCATCTGGAACATATTTGAAGCAGAGCCAAGTGAGGATAATAGGTGTCAGTGCTGACAATCAAAATCAGTGGAGAACCATTGTCGATATTGACTTGGTTCCACTTGGAGAAAAATTTGACAATACCACTGCACTTCTGTTATATGAGAGGTTTTGGAACAAAAAAGTTCATCTAAATAGGAGCCTTTTTGGTGATTATTCCACATTGTACGTTGCTTATCCAGGTATTCCATCATCACTGCCACCTGGATATCAAATTGGGAGTAGTCCCCTGCCCAGCAATCCTTTGGTGGGCCTCTGCTTGTCCCTCAAGGATTCTAGGCCTGTCATTGGCTTGGAATCTATGTTGTCAGGCAGAATTATGAGCTCAAGATCTATGTCCCTTGTGTCCGCTATTACTGCTTCTATTCTCTCCGTTAAAACATTTTCCTTTTCCGAGCTTGAGAAAGCAACAGATAAATTCAATTCTCAGAGAGTATTAGGAGAAGGAGGATTTGGACGTGTTTATTCTGGGACATTGGATGATGGAAATGAAGTTGCAGTTAAGCTGCTAACAAAGAATGGTCAGAATAGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCATCGTAATCTTGTGAAACTCTTCGGTATATGCATAGAAGGGAGAAGGCGTTGCTTGGTTTATGAGCTGGTTTACAATGGCAGTGTTGAGTCTCATTTGCATGGAGAGGAGAATCTTGTAACGTGGGCTCGACCTCTGTTGAGATACAGGGAAGGTTTAGAAAAGGTGGTGGATCCATTTTTGGCTGGAAAGTATGACTTCGATGAGATGGCAAAGATGGCGGCTATTGCTTCCTTGTGCGTCCACCCGGAGGTCACTCAAAGGCCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATCTACAACGACACCAATGAGAGTGAGAAGGAGTCTTTGTGCCATGAATCGGATTTTGGAGGTGACCTTGTCTTTTCTGATAGCAGTTGGTTGGATGGTGAAGGGGTAACCCCGACATTAACTTATGGACCTGAATCTTCCCTCATCACTATGGATTACAGTTCTGGTCTACTAGAAATGGAAAAGGGAACATCAAGCTTGAATGCAGATGAGACATCTTTGCCAATCAGGCACGGGAATAGATCAGGCCCCTTGAGAACAGCCCGGGGTAAGCCATCCTTTACTAAGCTTACTCGAAGTCGCAGCGATCATGTCGTATCCTTCCAAGCTTGTTTGTAA


Promoter Sequence:
>Vu_01976::LG1:24040753-24042753(-)
TTTTTCTTCTTGATTATTCGGTCTTGAGCAGCTTTCTAGTGTTTCTTTCATGTAGTTCTTGTTAGACTGGATGTGCGGCTGTATAATTTAATTATTCGGTAGTTCTAGATAATACTTGCTCCTCATATATGAAACCTAATTCTTTCGTGAGGCTTTGCTGGGTACATTGAATCTTGCCTATGTTTGTAAATATAGTAGTTTGGTCTGTGTGGATTGGCTTACAAGCGGACATCATTAGTATTTTAATATTATGACTGCATTCCACTACTCTTCTATCTGGTCCTACTGCTCATTTTCCATCTCTCATCACATTGGCTTCTTCTTCGTCCACTAATCTGAGAATTTGTCACAAAGCATTTCTAGCATGCTTCTCATAGACTAGACTAAAATGAAATCACTGTTTATGCCTACACGTTGGATTCTATTTAGTTATATATTCAGCACCTGATTATGGACCTGCATTGTGACAAGGAATTGATTCTTGGGCAGTGCAAATCCTACAAGAGAATATAACCGACGTAGTAGCCATGAGATGTTAAGTTGGAAGAGGGGGCATGAGATAGGATTGAAGATGAATGTATTAGAGAGAATTTGGCCTATACATCTGTTGCTGAAAAATGGTAGCATCTCAGTTTAGGTGGTTGGATCATTGGGTGCATGTAACACAAGTAAAGCCTAGTTAGGAGAGTAGATAGATGGAGAGTATCCTTAATTACCTATTACTAGAGGTAGAAGAAGACTGAGATAAATTATAGGTGAAATCATTAAGAAGAATTGCAAGGGAAATATTTTGTCTATATAGGCAGGCATGATTCACAATGGAACATTATAGTTTGGTGAATGTAGCTGACTGCATTCAGTTGAAAACAGTTCGATGTTGCTGCATTAGATATTTAGACAAATAAATTCGTTTCCAAATTCAATGTTTTCATTTGCAACTCTGGCATTCTCTCTAGAGAAAATTGATCTGAATGTAATGTCATACATTCTGGGGCAGGGATTCCATTTGAATTCAAATTTGGCCTAAGACATATTGCTGTGGTCTTTGGTGGTTTTTGTTTTAATGGGGCATGTGTGTTCCCCTTGTATTTTTTTTTCATTTAGGAATTTTAGAAGACTTGTACATATGGGATCTGTTGTGTGCATGTGCCTAGTAAGTCTGTGTTGATGTGTCAGAATCTGCTGTGCAGTTAAACATGAGATAGTGTCTGCTATTCTTTAGTGAAGCCCAGGACAAATTGTATTTTGGCTCATTTCTCACCAACCTTTGTCAGTCAAAGAAGTATTAGTTGAAAAATGCATTCGCTAACATCTGCCCTGTAGTGTTTTATGCAGACCAATGATTTAGCACTGGAATACTTGAAAATCTAAATGTTAATTAATGTAGGAAATCTATTGTTTTATATCTTTGTATTCAATAACACTAATCCTCTGCAAATGTGGAGTCTATTATAAGGTAATCTTTTGACAATCGTTACATGATGTTTAAAATGCTTCATCTTTTGGAGTATTTAATGATTGAACTGTAAACGGACATTTCTCTCAGTGGCTGTTGAACATAATATATTTTAAATTATTAGATTTTCCTGTGAACAAACTTTCTCATTTTCTTGTTGAAGTTTCTTAAAAATGTTTGGTAATTATGTCTGAGACTCTCATGTTTTATTCAATTTTCTTAGAGAAGGCCACCTTGATCTTCCAGTTATTTATCCAATTTCCTTTCAAAGGTGTGTTTTGTTATCATTTACCATCTTGCTGGGTTGTGTACCTGACAGTTGTAGATTTAATACTTTATTATATTTCCATTAATCCATTGAAAAGGATATTAGAGGATATGCATAATGTATATGCTCTTGATCATGAAAAATACTAAATCCAGATTAAATTAAATAAGATGGTAGTATAAAATCCTTCCAATATTGGATAGATTTTTTTCTAAATGAATCCTATGCTACTTTTATGTTCTTGAGCTCAGTTCATATCAAATCACTTTGGAATTC


Gene Sequence:
>Vu_01976(-)
ATGGAAAGGATTTTAAATGGAAACGAAAGTCTTTTGCCTACTAGGCAGAGGTGGCTACTTGAGAAGGAGTGTGACTAATTCATTTATTTTTAAATGATATTAAGAGATTCCTTCTGACGTTTTCTCTGCAAATTTAACTATGCTGCTGTCTATAACAGTGATAGGTTTTTTTTTTTTTTTGCAGTGAACTCAGTTTCTATGAATGTCCCATTTGCTTCATCTGAACGAGCTAAGACATTGTTACTTAAACCTTCTAGGCAATCTCTGTCTCAAGGTAAGCTATCATATTTTCCAACGGGTCATTATACTTCATGTTTACTACGAGACTAAGAATTAGTTTTCTTATGTAGGTCCTATTGTGACTCCAAGACCAAAACTTCCTCATTATGACCATCATCACCACAGTGGTAAATCTTATCCTGTGGTTCCATCCCCTTATAAAGACCCAGGTATTTCCTGAATGTTATACACTCTTCTGCTACTACTTTTACCATGGTCAGGGCTATTTCTAAAATCTCAATGGCTTTTCTGCTGATGCAATACTTTAATTATAGTCTTTTTTTCTTTCATACAATTCTCTACGTTTGTATTTTGTATTGTGTGTTGGTGAAGGGAATCAAAAATTGATTCTTTTAATGTATGATACTTTCATACATGGTAAGATAGTGTAAATAGGCATGATGTATAAATTGGATTATTTGGAAGAATCATTCGGATCTAGTTTGTTTGATGCTTGAGTACTTTTTTTATAAAATTAATAAATATACTATATTTGATGTTTTCTTCACTAGGTAAGGGTAAAAGTGCAATGGGGTAAAAGAAAATTTTGGATTGTATTAGTTTCACAATGTTATTTCAAGATGCCTTCAGGTTCTCACGGTCTGCTGTCTTATGGTATGGTTGGCCTGAAAGGTTTAGTAAATATTTAATACATTGGAGTGGAACTAGATATTTTATAATGGGAAATTCGAAGTTTCAGTTGGCATGAGTGCGAGTTCAATCCTTTTCTTATTAAATTGCACACAATTCTGTGAAATGGCATTCCCCACATCTTTGTTATCTAACATGACTATACCATAAAGCCATACACTCACCATACAAAATAATTTCTTGCAGCTTGTAGCCAAATCTGTACTGATCCATTCACTGCAACTCCTTTTGGTTCACCTTGTGGCTGTATATTTCCCATGAAAGTCAGACTAGTACTGGGTGTAGCTCCTCTGGTTGTTTTTCCAGTCATTACTGAGTTAGAGATTGAAATTGCATCTGGAACATATTTGAAGCAGAGCCAAGTGAGGATAATAGGTGTCAGTGCTGACAATCAAAATCAGTGGAGAACCATTGTCGATATTGACTTGGTTCCACTTGGAGAAAAATTTGACAATACCACTGCACTTCTGTTATATGAGAGGTTTTGGAACAAAAAAGTTCATCTAAATAGGAGCCTTTTTGGTGATTATTCCACATTGTACGTTGCTTATCCAGGTAGTAGTTTCCGTTTTTCTAATGACATTTTATGTTATCATTATCATATATGAGACTAATGCAGTTGGTATCCAGGTATTCCATCATCACTGCCACCTGGATATCAAATTGGGAGTAGTCCCCTGCCCAGTAATACCGTTGGTTTTCTCCCAATCACTGCTTCCTTCATGAATGAGCACGAGAAATTGACTCTTAAAACCATACTCATTATTTCTCTATGTTCTGCTGTACCCTTTTTAGTTTTGGTTGGAGCATTTTTCATTTTGTTGAAATGGTGGAAAATTAGGAGCTCATCAAGTGCTATGGGCCCTTCACTCACGTCATATCTAAATAAGAGATATGGTATAGCTTTTTATTTTACTGTATATGTTAATATTTTCATAAAATAATTTTCAGATGCTTATATAGAATCGGAAAAATTTGTTGCTAGATTGGTAAGCAATTTATTGTAAATTATGCTTAACTGAATTAATGCCTAAAATATCATTTGTTACGTTGAGTATAGTTCCATTTGCAATTTTATTTTATCAGTTCACTAAGTTTTGCTTAGTATGTGCCAAAGATTAGTCTAGTCATTTCTTTTTCTTTGAAAAGTACTTGGAAAATATCTTTTTGTTTTACACTGGCTTTTAAAGGTTTGCCTAGCTAATGAAGTAGTTAATTTTGTCTCAATTAAATTAGATATTTGTGATTTACATGAGGACCATTATATAATAGTGGTAAAACAGATTCTTATCCCCATCAATATAACTACTATTTCAAAAGGATAGCACTTACTTTCCAAAGGTTAGTCAAATAATGTTTCTTACTGGATTAAAATTTCTTTGGAGGCAATCCTTTGGTGGGCCTCTGCTTGTCCCTCAAGGATTCTAGGCCTGTCATTGGTACTTTGACTGTAGTAACATATCCTTATATCATATTTTCTACTAAAAGGACGCTAGTATTTCTATTGGATCAATAAGTTAGTGAGATGCCCTTTACTTTTGGTGGCTATTGAATATACCTACAATCAAATAGACTGGTGAAGTCAACATTTTTCATATTCAAGACAATGAATTCCACTTTATGTTTTCTTGGACACTTGAGTCTTGATAATTTACTTCGTTATGTAAACTGTATCATAGTTGAAGTGATAAACGGATGGATTATGCAGGCTTGGAATCTATGTTGTCAGGCAGAATTATGAGCTCAAGATCTATGTCCCTTGTGTCCGCTATTACTGCTTCTATTCTCTCCGTTAAAACATTTTCCTTTTCCGAGCTTGAGAAAGCAACAGATAAATTCAATTCTCAGAGAGTATTAGGAGAAGGAGGATTTGGACGTGTTTATTCTGGGACATTGGATGATGGAAATGAAGTTGCAGTTAAGCTGCTAACAAAGAATGGTCAGAATAGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGTTTGCATCATCGTAATCTTGTGAAACTCTTCGGTATATGCATAGAAGGGAGAAGGCGTTGCTTGGTTTATGAGCTGGTTTACAATGGCAGTGTTGAGTCTCATTTGCATGGTAATTATTACTTATTCTCTTTAGTTCTGGGTGTGTGCCATTTTTTCAACTTATAATGCTTTCTATATCAATCAAATTTAATTCCTGTTAATGATCCTGAAGGTGATGACAAGAAAAACTGCCCTCTGGATTGGGAAGCACGGAAAAGAATTGCCATTGGATCTGCAAGAGGTTTGGCCTATCTACACGAGGATTCCAATCCTCGTGTAATTCACCGAGACTTTAAAGCTAGTAACGTGTTGTTAGAAGATGACTTTACCCCTAAGGTTTCTGATTTTGGATTAGCCAGAGAAGCGGGTGAAGGAAATGGTCATATTTCTACAAGGGTCATGGGTACTTTTGGGTATGTTCTAAGACTTTGTCCGTGGGATTTGGATTTAGCATTGTTTTGAGTTCCACTTCGCGGCTTGGGTTTGAACCTAACTGCCATATCATGTGGCGGTGGTTCTGTGTGTATGTACGCGGATGCTGTATGGTTTTCAATTTCTTTAACATTAGATAACATCATCAATCAACGTCATAAAGTTATTCTCTGAGATTTTTATTCTTATATAATGTTCAACTCTAGATTGACGTTATATTTTTCATGCCATCGTGAATTCCTAGCCTTTAACTTGTGCAATTTCTACTATTCCATTTGGCAGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTATAACAGGCAGAAAACCAGTGGACATGTCTCAACCTCAAGGAGAGGAGAATCTTGTAACGTGGGCTCGACCTCTGTTGAGATACAGGGAAGGTTTAGAAAAGGTGGTGGATCCATTTTTGGCTGGAAAGTATGACTTCGATGAGATGGCAAAGATGGCGGCTATTGCTTCCTTGTGCGTCCACCCGGAGGTCACTCAAAGGCCTTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATCTACAACGACACCAATGAGAGTGAGAAGGAGTCTTTGTGCCATGAATCGGATTTTGGAGGTGACCTTGTCTTTTCTGATAGCAGTTGGTTGGATGGTGAAGGGGTAACCCCGACATTAACTTATGGACCTGAATCTTCCCTCATCACTATGGATTACAGTTCTGGTCTACTAGAAATGGAAAAGGGAACATCAAGCTTGAATGCAGATGAGACATCTTTGCCAATCAGGCACGGGAATAGATCAGGCCCCTTGAGAACAGCCCGGGGTAAGCCATCCTTTACTAAGCTTACTCGAAGTCGCAGCGATCATGTCGTATCCTTCCAAGCTTGTTTGTAA