Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02037 LG1 25001108 25004554 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to water, defense response to other organism, protein phosphorylation, protein phosphorylation, protein phosphorylation, cellular catabolic process, carbohydrate derivative metabolic process, small molecule metabolic process, phosphorylation, phosphorylation, cellular catabolic process, inorganic ion homeostasis, response to water, response to wounding, defense response to other organism, defense response to other organism, negative regulation of metabolic process, cellular catabolic process
Cellular Component   is active in   plasma membrane
Cellular Component   located in   cytoplasm, cytoplasm
Molecular Function   enables   protein kinase activity, protein kinase activity, protein kinase activity
SNP Position Effect Amino acid change
T/C 25001151 missense_variant p.Asp725Gly
T/C 25001153 synonymous_variant p.Glu724Glu
G/A 25001177 synonymous_variant p.Ser716Ser
G/T 25001183 synonymous_variant p.Ile714Ile
G/A 25001186 synonymous_variant p.Ser713Ser
A/C 25001216 synonymous_variant p.Ala703Ala
A/G 25001219 synonymous_variant p.Leu702Leu
A/T 25001249 synonymous_variant p.Pro692Pro
G/A 25001283 missense_variant p.Ala681Val
G/A 25001305 synonymous_variant p.Leu674Leu
C/T 25001324 synonymous_variant p.Glu667Glu
A/G 25001330 synonymous_variant p.Asp665Asp
A/C 25001450 intron_variant
G/T 25001453 intron_variant
C/T 25001462 intron_variant
C/A 25001464 intron_variant
T/C 25001471 intron_variant
C/A 25001478 intron_variant
A/C 25001506 intron_variant
C/T 25001516 intron_variant
A/G 25001533 intron_variant
C/G 25001540 intron_variant
G/C 25001546 intron_variant
T/G 25001569 intron_variant
T/C 25001606 intron_variant
C/A 25001617 intron_variant
A/T 25001633 splice_region_variant&intron_variant
C/G 25001740 missense_variant p.Ser624Thr
C/A 25001789 splice_acceptor_variant&intron_variant
A/G 25001827 intron_variant
T/C 25001840 intron_variant
G/A 25001851 intron_variant
G/T 25001862 intron_variant
G/C 25001878 intron_variant
A/G 25001923 missense_variant p.Ile597Thr
G/A 25001950 missense_variant p.Ser588Phe
A/T 25002045 intron_variant
A/G 25002078 intron_variant
T/G 25002095 intron_variant
A/T 25002098 intron_variant
G/A 25002108 intron_variant
A/C 25002111 intron_variant
G/A 25002139 synonymous_variant p.Asp553Asp
T/C 25002181 synonymous_variant p.Ala539Ala
T/C 25002208 splice_region_variant&intron_variant
T/C 25002218 intron_variant
G/A 25002243 intron_variant
G/A 25002261 intron_variant
A/G 25002285 splice_region_variant&intron_variant
T/G 25002293 missense_variant p.Thr532Pro
T/C 25002306 stop_lost p.Ter527Trpext*?
T/C 25002366 stop_retained_variant p.Ter507Ter
C/T 25002414 synonymous_variant p.Glu491Glu
A/T 25002424 stop_gained p.Leu488*
T/C 25002437 missense_variant p.Thr484Ala
A/T 25002472 intron_variant
G/A 25002480 intron_variant
A/T 25002483 intron_variant
T/A 25002486 intron_variant
G/T 25002498 intron_variant
C/T 25002500 intron_variant
C/G 25002530 intron_variant
A/G 25002549 missense_variant&splice_region_variant p.Trp478Arg
G/A 25002680 missense_variant p.Ser434Phe
T/G 25002836 intron_variant
T/C 25002850 intron_variant
A/T 25002866 intron_variant
A/T 25002884 splice_region_variant&intron_variant
C/A 25003013 missense_variant p.Cys354Phe
T/C 25003068 missense_variant p.Arg336Gly
G/A 25003215 stop_gained p.Gln287*
T/C 25003229 missense_variant p.Asp282Gly
A/G 25003233 stop_lost p.Ter281Glnext*?
T/C 25003267 stop_lost p.Ter269Trpext*?
A/G 25003325 missense_variant p.Val250Ala
C/T 25003539 missense_variant p.Ala179Thr
G/T 25003546 missense_variant p.Asn176Lys
T/A 25003548 missense_variant p.Asn176Tyr
C/T 25003550 missense_variant p.Arg175His
A/G 25003620 intron_variant
A/T 25003623 intron_variant
G/T 25003631 intron_variant
G/T 25004001 intron_variant
C/T 25004017 intron_variant
A/T 25004106 intron_variant
A/G 25004152 intron_variant
A/G 25004245 synonymous_variant p.Ile65Ile
A/G 25004271 stop_lost p.Ter57Glnext*?
G/A 25004304 intron_variant
G/T 25004353 intron_variant
A/C 25004358 intron_variant
A/G 25004429 synonymous_variant p.Cys42Cys
C/A 25004492 synonymous_variant p.Val21Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02037.1
MLPTSTAGEASQGGRTVVVGVKMDSHSTELLTWALFKVAQPCDVVLALHVLGNDEIVNRDGKSSLFSLVKAFDSVLAVYEGFCNLKQVDLKFKICRGSSVRRILVREANAYSATHIIVGSPQGLHRIRPCISVARYCAKKLPRDCWVLAVNNGKIVFKRDGSPATAADMKGVDQNHATGALSSIHRTLGNTSKVLDDDGSGMQGKGSGQFSDHSLAKAFLESKEFIEKKSCSVCSSNPALFGLYCNHSEEESCGDACDENPLAIVSVQTNDSNSKPGWPLLHRTIVSDRKCSERSMFRQISVVQWAMQLPSRNLSYAAHLDQKANNCGQNKDQFLGLDSKSGALVPVDAELGTASVPEHNPRSIPKELEGLHERYSSSCRLFKYQELVFATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFVLEIEIITTLHHKNIISLLGFCFEDGNLLLVYDFLSRGSLEENIHGNKKNPLVFGWTERYKVAMGVAEALEYLHNNEGQSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHIICTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSDYPKGQESLVMWANPILNSGKVLQLLDPSLGDNYDPEEMERMVLAATLCIRRAPRARPQMSLIKKLLGGDGEVMKWARLEVNAVEAAEMADDEACLPSSNLQSHLNLALRDVEDDSLSICSVEQNISLEDYLRGRWSRSSSFD*


CDS Sequence:
>Vu_02037.1
ATGCTGCCAACTTCCACCGCCGGAGAGGCCAGCCAAGGTGGCCGGACGGTGGTCGTTGGAGTGAAGATGGACTCCCACAGCACCGAGTTGCTCACTTGGGCTTTGTTCAAAGTGGCTCAGCCCTGTGATGTTGTGCTTGCTCTTCATGTTCTTGGGAATGATGAAATTGTTAATCGGGATGGGAAATCGTCTTTATTTTCACTTGTCAAAGCGTTTGACTCTGTGCTTGCCGTTTACGAAGGGTTCTGCAATTTGAAACAGGTGGATCTTAAGTTCAAAATATGTCGGGGTTCATCAGTGAGGAGAATTCTGGTTCGAGAAGCAAATGCTTATTCTGCAACGCACATCATAGTTGGAAGTCCTCAAGGTCTTCACAGAATTCGGCCATGTATATCTGTGGCAAGGTACTGTGCTAAGAAGCTACCAAGGGATTGTTGGGTTCTTGCTGTTAATAATGGGAAAATTGTGTTCAAGAGGGATGGATCACCAGCAACTGCAGCTGACATGAAAGGAGTTGATCAGAACCACGCAACTGGGGCGCTTAGTTCGATTCACAGGACACTTGGCAATACTTCAAAAGTGCTAGATGATGATGGGTCCGGGATGCAGGGAAAGGGTAGTGGTCAATTTTCAGATCACAGTTTGGCTAAGGCTTTCCTGGAATCTAAAGAATTCATTGAGAAGAAGAGTTGCTCTGTTTGTTCTTCAAACCCAGCACTGTTTGGTTTATATTGTAACCATTCAGAAGAAGAGTCATGTGGTGATGCTTGTGATGAGAACCCTTTGGCAATAGTGTCTGTGCAGACCAATGATTCTAATTCTAAACCAGGTTGGCCTTTGCTTCATAGGACAATTGTATCTGACAGGAAATGTTCTGAAAGATCGATGTTTCGCCAGATCTCTGTGGTACAATGGGCAATGCAGTTACCTTCTAGAAATCTTTCATATGCTGCACATCTTGACCAAAAAGCAAACAATTGTGGCCAAAATAAGGATCAGTTTTTGGGTCTAGATAGCAAGAGTGGTGCTCTTGTTCCAGTGGATGCTGAATTAGGGACTGCCTCTGTGCCTGAACACAATCCTAGAAGCATTCCTAAGGAATTGGAGGGCCTTCATGAGAGATACTCATCCAGTTGCAGATTGTTTAAGTACCAAGAACTTGTATTTGCAACATCAAATTTCTTGCCAGAAAATTTGATTGGGAAAGGAGGAAGTAGCCAGGTATACAGAGGCTGCCTTCCTGATGGCAAGGAACTAGCTGTTAAGATCTTAAAGCCATCTGATGATGTTCTGAAGGAGTTTGTTCTAGAAATAGAAATTATCACTACCTTGCATCACAAAAACATAATTTCCCTCCTTGGATTCTGCTTTGAGGATGGTAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACATCCATGGTAATAAGAAAAATCCACTTGTGTTTGGTTGGACTGAGAGATACAAGGTGGCCATGGGTGTTGCTGAGGCTTTGGAGTATCTACATAATAATGAAGGCCAATCTGTGATCCATCGCGATGTAAAATCATCAAATGTTTTGTTATCTGAGGATTTTGAACCACAGCTCTCTGACTTTGGACTTGCAAAATGGGCATCAACTTCATCATCACATATAATCTGCACAGACGTTGCTGGAACCTTTGGTTACATGGCTCCTGAGTACTTCATGTATGGCAAAGTAAATGACAAGATTGATGTCTATGCATTTGGTGTTGTGCTTCTTGAGCTCCTCTCAGGGAGAAAGCCCATAAGTAGTGATTATCCCAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAATCCAATTCTAAATAGTGGGAAGGTGTTACAATTGTTAGATCCTAGTTTGGGTGATAACTATGATCCTGAAGAGATGGAAAGGATGGTCTTGGCAGCTACACTTTGTATCAGACGTGCTCCAAGAGCTAGACCTCAAATGAGCCTTATCAAAAAGCTCCTTGGAGGTGATGGTGAGGTGATGAAGTGGGCAAGACTAGAAGTGAATGCTGTGGAAGCAGCAGAAATGGCTGATGATGAAGCTTGTCTTCCTTCTTCCAATCTGCAGTCACACCTTAACCTTGCTCTGCGTGATGTGGAGGATGACTCACTCTCCATCTGCAGCGTTGAGCAAAACATCTCATTGGAAGACTACTTGAGAGGCAGGTGGAGCCGTTCATCAAGCTTTGATTGA


Promoter Sequence:
>Vu_02037::LG1:25004554-25006554(-)
AGTTTTTTTAGTACCTAAACTTTTTTGGGTTCTTTCATATCGATCCACCAAATGAATCAAGTAAAAAAAGTTTAAAATCTTCATACAAAGAAATAGATGTAAAAATTAATGTAAGTTTATCTACTATAACACTAAAAGAAGATTTCAGTAAAAAAATTATTAAGAATGCCTATAAATATTAGTGCAAATAAGCCTGGTAATTATAATTAAGGGTGATTGAACTATAATTAGGTTGAACAATTTGTATAAATAGGGGGTTCAAGTAAAATAATTGGTTACATTGATTGTTGTATTTAATATCTAACTATTTAGATACTTTCTGACTTAAGAAATATTGGACAAACGAAAAATTCAAAGTATTGGGCGAAAAACAATAACTTACTGATAGGAGAGAACGAAGTAGCGAAAAAATAAATTATCTTAAAATTGTAAATAATCAATTGGTCCAACCAAAATATGTATGTATAATAAGTCTCACACGTTTGTGTATTATAAAGCGAAATACTAATCCTAATATTTACTTGTACAAATATTAAAATCTTGTGTCAAGATTGGAAAAGTTAGAAAGAATTTTGTATTTAGTGGTTCATTATGCATCATTTATGATTTTTTTGTTTCTTATAGAACATTTTTTTTAAAAATATGAGAATTGTAATTAAGTTTTATTTTAAATTATGACGTAAATTTTATCAATTTAAACTGTCATGTGGTGAATATTCATAGTTTGAAGCAATGTATTTTTTTTTTAATATTTCTCCAAGGTAAATGCTTTTCTAAAACATTCAATTTCAAAGAATTTATTTTAAGATAAAAATCACGCATTGATTGATCTTACCGTACAATTTTTGTGATACTTTGACTATATAAGTTTTTTCATTATCAACTATTTTAGTCTCCATCCGCGTAGATCAAAGATCATGTAGGCTAACTAAATTGATGAGTCTAAATTACAGTCCATATTTAAACAATATACTTAAATAAATTAAATATTGTAATTAATAATAATAATTAATTTTATTTAAAAGAAAGTGTAAAGACTAACCCTTACAATAATTATTCAAAGACCAAACATTCAATTGCCATAACTTTCAGAAAGTAAAACTTACACTTTCGTAAATTCTGTTATTTTTTTTTTCAAATGAAACATACCCTCACTAATAACTCTACTAATCATGATAATAATAATAATAATATCCAATTTGCAAACAATTCAATAATTCCACATTAGTCAAAATAAAGATAATTTAAATGATCTTTTTTCAAATTTTTTTAAATATTTTCTAAAAGTAAAATCATAAACAATGTTTTAAATATTATAATTGATTTTAATGATAAAAAAGTCAATATTAAAACATTGATATTATTTATAAAAACAAAAATAAAGTTTTAAATTATAAAAAACTATAAAATTTAAAATCAACAATACCTTAAATACAATACTCAATTATAATAATATCTCAACATACTACAACTAATTAGTTAAAAACTAAAAAGAAAGGAGAAACAATAATCAACCACAAAAAAAATGATAAAATAAAAAACATGTAAGTATGTATAATTCTACTACTTCTCAATCCCTTTCCACGTTGACCTAAAAGCAACCTCGTGGTAGATTCCAAATCCCGAGACAAAACTCTTTGATATTTTTAATGAAAAAGATTTAGATCCAATGATGTCATTTACTGGTGGGACCCAGTGGTCAAAATCCACGCATTAAATCATGATGACACACAATCCCATGCTTAAAAATACGTATATAGCATCACCGTTACAGTGGTATCATTAGTTAACACAACAGCATAATAAATAAATAATAATAGCACTGATAATTTCTTCGCCTTTCGTTTTCTACTTTGGTGCGCACACACACTCACGCACGAGCTTCAAAACCAAACCAAACTTTGTTCCAACCTCCAAAGTTTCAAACTTTTTTTCTGCCATTCATGACTCATGCCATCACCGACAATAACAGAACAACGGTAAAGCACTGAATCATGAAA


Gene Sequence:
>Vu_02037(-)
ATGCTGCCAACTTCCACCGCCGGAGAGGCCAGCCAAGGTGGCCGGACGGTGGTCGTTGGAGTGAAGATGGACTCCCACAGCACCGAGTTGCTCACTTGGGCTTTGTTCAAAGTGGCTCAGCCCTGTGATGTTGTGCTTGCTCTTCATGTTCTTGGGAATGATGGTATAAAATACATAACCATCCCATCAAATGATGTTTTTCTTTTCTTCTTTTTTTAGTTTTTATGGAGTGTGACAGTTTTTTTTTTCTCTTTTTGGTGAAATGGGTTGCTGCAGAAATTGTTAATCGGGATGGGAAATCGTCTTTATTTTCACTTGTCAAAGCGTTTGACTCTGTGCTTGCCGTTTACGAAGGGTTCTGCAATTTGAAACAGGTTGTGTTTCTCAGCATCTCTCTCCAACTCTTTCCCAGTCATGTTCTCGGAGTTTTAAATTGTGTCGGTGGTTTTGTCACTGTTTTTGATGGTGATCGCAATGGCTCCAGAAACCTTGTTTAACATTGCATATTTTTTATGTTATGTGGGACACGGATTTAATGTTGTAACTCAAGTTACAAATGATGTTTTAGCCTGAAGGGTGAGGGAATCTCTTGATTAGAATATGTGAATTGTAAGTTTTTTCTTTAATTTTTTTGTGGAACTATTATTCAGGTGGATCTTAAGTTCAAAATATGTCGGGGTTCATCAGTGAGGAGAATTCTGGTTCGAGAAGCAAATGCTTATTCTGCAACGCACATCATAGTTGGAAGTCCTCAAGGTCTTCACAGAATTCGGCCATGTATATCTGTGGCAAGGTACTGTGCTAAGAAGCTACCAAGGGATTGTTGGGTTCTTGCTGTTAATAATGGGAAAATTGTGTTCAAGAGGGATGGATCACCAGCAACTGCAGCTGACATGAAAGGTTTTTATTGAATTTTCCTTGTTCTGTGCTGTGGTGTGAGATTGTGAGTCTCATGATTAGAGTTCTGAGTGGATGTGTCTGTTGCAGGAGTTGATCAGAACCACGCAACTGGGGCGCTTAGTTCGATTCACAGGACACTTGGCAATACTTCAAAAGTGCTAGATGATGATGGGTCCGGGATGCAGGGAAAGGGTAGTGGTCAATTTTCAGATCACAGTTTGGCTAAGGCTTTCCTGGAATCTAAAGAATTCATTGAGAAGAAGAGTTGCTCTGTTTGTTCTTCAAACCCAGCACTGTTTGGTTTATATTGTAACCATTCAGAAGAAGAGTCATGTGGTGATGCTTGTGATGAGAACCCTTTGGCAATAGTGTCTGTGCAGACCAATGATTCTAATTCTAAACCAGGTTGGCCTTTGCTTCATAGGACAATTGTATCTGACAGGAAATGTTCTGAAAGATCGATGTTTCGCCAGATCTCTGTGGTACAATGGGCAATGCAGTTACCTTCTAGAAATCTTTCATATGCTGCACATCTTGACCAAAAAGCAAACAATTGTGGCCAAAATAAGGATCAGTTTTTGGGTCTAGATAGCAAGAGTGGTGCTCTTGTTCCAGTGGATGCTGAATTAGGGACTGCCTCTGTGCCTGAACACAATCCTAGAAGCATTCCTAAGGAATTGGAGGGCCTTCATGAGAGATACTCATCCAGTTGCAGATTGTTTAAGTACCAAGAACTTGTATTTGCAACATCAAATTTCTTGCCAGGTGTTTATTTTATCTTGTGCTTGTTTGAAACATGCGATCAACTTGTCAAAAAAAGAGGGTTTATTTTTAACATGATTTGTTGTGTGATTTCAGAAAATTTGATTGGGAAAGGAGGAAGTAGCCAGGTATACAGAGGCTGCCTTCCTGATGGCAAGGAACTAGCTGTTAAGATCTTAAAGCCATCTGATGATGTTCTGAAGGAGTTTGTTCTAGAAATAGAAATTATCACTACCTTGCATCACAAAAACATAATTTCCCTCCTTGGATTCTGCTTTGAGGATGGTAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACATCCATGGTACACTACTTTATTTTGTCACTGTTAATTTCTTTTCAACCCATGTGGCCTTGTTAACTCAATATTTCCTTCTTTTCATTTCAATGAAAAATAGGTAATAAGAAAAATCCACTTGTGTTTGGTTGGACTGAGAGATACAAGGTGGCCATGGGTGTTGCTGAGGCTTTGGAGTATCTACATAATAATGAAGGCCAATCTGTGATCCATCGCGATGTAAAATCATCAAATGTTTTGTTATCTGAGGATTTTGAACCACAGGTACTGTATCCCTTTATTGGTTGAATTTCATGTTTTGAATCATTTGCACATGTTAGGCCTCATGCTGCTTTATTGATTTTGAACACAGCTCTCTGACTTTGGACTTGCAAAATGGGCATCAACTTCATCATCACATATAATCTGCACAGACGTTGCTGGAACCTTTGGGTTTGTACTTTCACACATGCTGCTGAAAGAATTTGCATTTAAATAGTTCCAATTTCTAAATTCTATAAACACTCATTTATGCAGTTACATGGCTCCTGAGTACTTCATGTATGGCAAAGTAAATGACAAGATTGATGTCTATGCATTTGGTGTTGTGCTTCTTGAGCTCCTCTCAGGGAGAAAGCCCATAAGTAGTGATTATCCCAAAGGTCAAGAGAGCCTTGTCATGTGGGTATGTCTCTGCAATATTATAGTCTATCACCTACTCTGCTACACTTCTTACATATTCACATGTATTGGAGGAAAAATAATGGAAAAACAACTTTTTGCAGGCAAATCCAATTCTAAATAGTGGGAAGGTGTTACAATTGTTAGATCCTAGTTTGGGTGATAACTATGATCCTGAAGAGATGGAAAGGATGGTCTTGGCAGCTACACTTTGTATCAGACGTGCTCCAAGAGCTAGACCTCAAATGAGCCTTGTGAGATATCTATAAACTATAAGTTACCCAGACACATACACACACACATACCAACACACCATAGAGATAAAATGAACTTGTTTGAACTTATTTCGATGAGTTTCTTTCATAGAAATGACAGAAGAAATTATTTTCTTCAATTGGATAACTTTTTCTTGATTGTATTTGAATAGATGTGATAATAAGCACTTCTAAGATGAGTTAGTAACATCACACTCCTTGACTTTATGTTCATATTTGAACATTGTGATATTGTTAATGTGATATTTGTTTCATTGGAGCACAGATCAAAAAGCTCCTTGGAGGTGATGGTGAGGTGATGAAGTGGGCAAGACTAGAAGTGAATGCTGTGGAAGCAGCAGAAATGGCTGATGATGAAGCTTGTCTTCCTTCTTCCAATCTGCAGTCACACCTTAACCTTGCTCTGCGTGATGTGGAGGATGACTCACTCTCCATCTGCAGCGTTGAGCAAAACATCTCATTGGAAGACTACTTGAGAGGCAGGTGGAGCCGTTCATCAAGCTTTGATTGA