Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02121 LG1 26296522 26297229 PREDICTED: ethylene-responsive transcription factor ERF014
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of transcription, DNA-templated, response to salicylic acid, response to jasmonic acid, cellular response to freezing, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, response to jasmonic acid, cellular response to freezing, cellular response to heat, cellular response to heat, cellular response to heat, cellular response to freezing, positive regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
G/A 26296528 synonymous_variant p.Phe234Phe
A/G 26296600 synonymous_variant p.Ala210Ala
A/T 26296885 synonymous_variant p.Ala115Ala
A/T 26296894 synonymous_variant p.Ala112Ala
T/G 26296918 synonymous_variant p.Ser104Ser
T/G 26297005 synonymous_variant p.Ala75Ala
G/T,A 26297006 missense_variant p.Ala75Val
C/G 26297163 missense_variant p.Ala23Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02121.1
MVKPEKKINTESSKALSVSSSSAAASSENKKKFKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSSHYIPQDTVMSPKSIQRVAAAAANNFLDTAIATTPSSPPLASTTSSSSFVSSPSISSSPSDQIDDDVSLLSPFGAYTPPPPSVNCDQANESMAMMEYWYDLEELQSPKYVEQMLSGAFFDIDSTQLFDDLYEESDISLWSFC*


CDS Sequence:
>Vu_02121.1
ATGGTTAAGCCAGAGAAGAAGATCAACACAGAATCATCAAAGGCATTATCAGTATCTTCCTCATCAGCAGCAGCATCAAGTGAGAACAAGAAGAAGTTCAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTGTCAGAGATTAGAGCACCAAACCAAAAAACTAGAATATGGTTGGGATCTTATTCAACTGCTGAGGCAGCAGCAAGAGCCTATGATGCTGCACTGCTTTGCCTTAAAGGCTCCTCAGCCAATCTCAACTTCCCTTCAAGCTCCTCCTCACACTACATTCCTCAAGACACTGTCATGTCACCAAAATCAATCCAAAGAGTGGCTGCAGCTGCTGCCAACAACTTCTTAGACACTGCCATTGCTACCACCCCATCTTCTCCTCCTCTTGCTTCAACAACCTCTTCCTCTTCATTCGTCTCATCCCCATCAATCTCATCATCTCCCTCGGACCAAATTGACGATGATGTCTCACTTCTGTCACCATTTGGGGCTTACACTCCTCCTCCACCTTCTGTTAACTGTGATCAAGCAAATGAATCAATGGCTATGATGGAATATTGGTATGACTTGGAGGAGTTACAATCACCAAAGTATGTTGAGCAAATGCTAAGTGGGGCTTTTTTTGACATTGATTCCACACAGTTGTTTGATGATCTGTATGAAGAAAGTGACATTAGTTTGTGGAGTTTCTGCTGA


Promoter Sequence:
>Vu_02121::LG1:26297229-26299229(-)
AAATGCTGCAAAGCACACATTAAATACAAATACCGTAAAGTAGTCCTTGTTTGGTGTGACACATAAAATAAATCACATTTTATTTAGGAAACAAGGGCCCAGGACGCGCTTTTACAGAGAAGCCACAGCTGTGTTTGGTTGCAACGCATGCGAAAACGTTGTTTTCTTTTTCTCATCACAGTAATTTTTGTTCATAACAGCTTATCACTTTAAAATTCTACTTAAACAAGCATCAACACCTGCAGATCTTGGAAGCTGCTCGTGACACAATTTTTTTTTTCTTTTAACATGTATTATATTAATATATATGGGAAATAAATAATAGTACCAAATTCTGATGCACTAGTACATTTTGTAGGTTTATCTGTATTTAATAGTCTTATGAAGTGTGACTTACATCAATTGTATCAAATAATAAAGAATGTGTTGAAGTATGTTAAGAGAATATATCAGCATTTATAATTACTATGGAGTTCGAACAAACCTATAGTTTTAGGTAGTCTGTATAAGTTTAAATTGATTGATGTCATATTTGTAAGAAAATATTAATTTGTTAGGTATTCCTTAAATTAACTATCCTTTATGGTAAAAGTGATTTAAAAAAGCAGTATATTTATTATTTTTGTTACGAAAACCTTAAACCAACGCGTTGTAGTGAAATAAAAGATATGTTTACATTTAATTCAGAAGAGAGAGAAAACATTATTTAATCACAACTGTTTTATTTGTACTACAATTACTATATACGTTTAAGTTTGGCTTTTTAATTGATTTTTTCCCAATAAAGTGTTAATTTTATACCTTTAGTTTGCTCCAGAATAAATTACACCAATATTTATGCGTGTTTTAGAAAAATAAGACGGGTACAGAAATAATATAATAATATTGTTTATATTAAGGAAATTATTTTAAAAAAAAACTGCTTCAAAAGGTAATAAATGTATACTGTCTAATTTTAAAAAAAAAACTTCTATATTTAGATTGAAATAGTATCATACATATAAAAATGTTGATATATAAAAAATTTATATATAATAATTAATTAATGAAAATGAAATTATGATATATATATATATATATATATATTTGATCTTTATTAATTAAATTTTATTAAAAAACATTAAGGTTCGAATTGGGTAAGTTGTTTTTAAAACAGACAGGTTTCTGTATTTTATTTTTCATAAGGTTTTACTATAGTGTGGTTTTTCGTCAATTGGGTTTGTTTTGGAAAACGATTCTATCTTTTTTGGTAAACAAGATTATTGAATGTAATTCTTGGAAAATGAAACACTAAAAAGACAATTCAGGAATGAAAGAGACAGTGAATAAATGTTCAGCATAAACCATGAACTTCCGTTGTTTAAGTTTGAAAACCTGTTCACTCATAGTTGTCCATGGTCGTACTAGTAACTGTACTGCAAACCTCGCTGTCAAAAACACGCAGTGCTTCTATTTTTCCATAAAAATACTCAATAAAATTCAATACACTAATTGTAATAGATAATAATAACGGGACGACTTAGCATCTTCTCCATCACCAAATTAGCTTACTAGGATGTTCTTTTTTTATAGTTTGCTGAATTGTTTTATTTGCTCGTCATTATTGAAATATTTTTTCTCTCCATCATAGAATATACGTATCTGAAGGAAGCTTCACTGAGATAAAGGACAAAAAGGTCATTTCATGAACTGAGTCCTCTCCTCTGTATTAAATTTAATTTAATTAAATCTGGCAACAATCTCAAACCTTAAAAACAAGTCTCAATCTATAAATACAGCATCCTCACTTCTCCATTTCCAAGAAGCAGAACCAGAAGTTTTCATCCCAAACACACATTACAGAAACTCTTGAACAAACCTTGACACTCCTTTATATTCATACATCTTCTCTCAAAACATTTTCACACATCTTTTCATCAAATCTTCACACCAAAGAGCCAATCTTTACTCAAACACTTTCACCCCTGAAGAAAGCTAGCATCTTTGAACCATCTATCATA


Gene Sequence:
>Vu_02121(-)
ATGGTTAAGCCAGAGAAGAAGATCAACACAGAATCATCAAAGGCATTATCAGTATCTTCCTCATCAGCAGCAGCATCAAGTGAGAACAAGAAGAAGTTCAAGGGAGTGAGAATGAGAAGCTGGGGCTCATGGGTGTCAGAGATTAGAGCACCAAACCAAAAAACTAGAATATGGTTGGGATCTTATTCAACTGCTGAGGCAGCAGCAAGAGCCTATGATGCTGCACTGCTTTGCCTTAAAGGCTCCTCAGCCAATCTCAACTTCCCTTCAAGCTCCTCCTCACACTACATTCCTCAAGACACTGTCATGTCACCAAAATCAATCCAAAGAGTGGCTGCAGCTGCTGCCAACAACTTCTTAGACACTGCCATTGCTACCACCCCATCTTCTCCTCCTCTTGCTTCAACAACCTCTTCCTCTTCATTCGTCTCATCCCCATCAATCTCATCATCTCCCTCGGACCAAATTGACGATGATGTCTCACTTCTGTCACCATTTGGGGCTTACACTCCTCCTCCACCTTCTGTTAACTGTGATCAAGCAAATGAATCAATGGCTATGATGGAATATTGGTATGACTTGGAGGAGTTACAATCACCAAAGTATGTTGAGCAAATGCTAAGTGGGGCTTTTTTTGACATTGATTCCACACAGTTGTTTGATGATCTGTATGAAGAAAGTGACATTAGTTTGTGGAGTTTCTGCTGA