Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02219 LG1 28200035 28201976 rust resistance kinase Lr10-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, regulation of defense response, protein phosphorylation, defense response to other organism, response to fungus, protein phosphorylation, phosphorylation, phosphorylation, defense response to bacterium, protein phosphorylation, response to fungus, defense response to other organism, protein phosphorylation, defense response to bacterium, response to salicylic acid, immune system process, signal transduction, protein phosphorylation, defense response to other organism, defense response to bacterium
Cellular Component   located in   extracellular region, extracellular region, extracellular region
Molecular Function   enables   protein serine/threonine kinase activity, protein kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, polysaccharide binding, protein kinase activity
SNP Position Effect Amino acid change
A/G 28200062 missense_variant p.Tyr477His
A/G 28200136 missense_variant p.Val452Ala
T/G 28200261 stop_lost p.Ter410Cysext*?
A/G 28200275 missense_variant p.Ser406Pro
T/C 28200386 upstream_gene_variant
T/C 28200452 upstream_gene_variant
A/T 28200533 upstream_gene_variant
C/G 28200775 stop_lost p.Ter370Serext*?
G/C 28200777 missense_variant p.Cys369Trp
G/C 28200895 missense_variant p.Ser330Cys
C/T 28200928 missense_variant p.Ser319Asn
T/A 28200957 stop_lost p.Ter309Tyrext*?
A/G 28200959 stop_lost p.Ter309Glnext*?
C/A 28201110 synonymous_variant p.Gly258Gly
A/G 28201133 upstream_gene_variant
C/G 28201163 upstream_gene_variant
T/G 28201177 upstream_gene_variant
A/G 28201225 missense_variant p.Ile251Thr
C/A 28201233 synonymous_variant p.Ser248Ser
T/G 28201248 missense_variant p.Gln243His
T/G,A 28201256 missense_variant p.Thr241Ser
G/T 28201265 missense_variant p.Pro238Thr
A/G 28201278 synonymous_variant p.Cys233Cys
T/G 28201303 missense_variant p.Lys225Thr
G/C 28201318 missense_variant p.Thr220Arg
T/C 28201319 missense_variant p.Thr220Ala
T/C 28201327 missense_variant p.Lys217Arg
T/G 28201330 missense_variant p.Glu216Ala
G/T 28201347 missense_variant p.Asn210Lys
A/C 28201368 missense_variant p.Ser203Arg
C/T 28201369 missense_variant p.Ser203Asn
A/C 28201372 missense_variant p.Leu202Trp
C/G,T 28201375 missense_variant p.Arg201Pro
G/A 28201376 missense_variant p.Arg201Trp
C/A 28201380 synonymous_variant p.Val199Val
A/C 28201381 missense_variant p.Val199Gly
C/T,A 28201382 missense_variant p.Val199Leu
G/A 28201389 synonymous_variant p.Asp196Asp
G/T 28201393 missense_variant p.Ser195Tyr
C/G 28201398 synonymous_variant p.Ser193Ser
A/G 28201430 missense_variant p.Ser183Pro
T/C 28201472 missense_variant p.Asn169Asp
G/A 28201514 missense_variant p.Pro155Ser
A/G 28201519 missense_variant p.Ile153Thr
C/T 28201521 synonymous_variant p.Gln152Gln
A/T 28201527 missense_variant p.Ser150Arg
C/A,T 28201542 synonymous_variant p.Pro145Pro
T/G 28201589 missense_variant p.Lys130Gln
C/G 28201591 missense_variant p.Arg129Pro
G/A 28201596 synonymous_variant p.Tyr127Tyr
A/*,G 28201603 missense_variant p.Leu125Ser
T/C 28201606 missense_variant p.Asp124Gly
C/G 28201641 missense_variant p.Lys112Asn
A/G 28201647 synonymous_variant p.Phe110Phe
T/G 28201677 synonymous_variant p.Thr100Thr
G/T 28201678 missense_variant p.Thr100Lys
T/C 28201679 missense_variant p.Thr100Ala
A/T 28201685 missense_variant p.Tyr98Asn
A/C 28201686 missense_variant p.Ile97Met
A/T 28201691 missense_variant p.Phe96Ile
T/C 28201696 missense_variant p.Asn94Ser
G/*,C 28201700 missense_variant p.Gln93Glu
C/T 28201706 missense_variant p.Asp91Asn
G/A 28201710 synonymous_variant p.Asn89Asn
T/C,A 28201712 missense_variant p.Asn89Tyr
A/G 28201716 synonymous_variant p.Val87Val
T/G 28201804 missense_variant p.Lys58Thr
T/C 28201834 missense_variant p.Lys48Arg
G/A 28201844 missense_variant p.Pro45Ser
C/T 28201846 missense_variant p.Gly44Glu
C/T 28201849 missense_variant p.Gly43Glu
T/A,C 28201855 missense_variant p.Gln41Leu
G/C 28201856 missense_variant p.Gln41Glu
A/T 28201862 missense_variant p.Tyr39Asn
G/T 28201864 missense_variant p.Pro38His
G/A 28201865 missense_variant p.Pro38Ser
A/T 28201868 missense_variant p.Leu37Met
T/C 28201871 missense_variant p.Lys36Glu
A/T 28201926 synonymous_variant p.Thr17Thr
T/A 28201953 synonymous_variant p.Pro8Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02219.1
MAESSVLPLQGESLLITLLLMFLLIVSSSGEKECSKLPYCQSGGPPIKFPFQLVQGMKDACDSPGLCVYCSENKETMLLHPTVKLRVTNIDYQNQFIYLTDPENCLPKKFLKLNNFTIPPYQLDLSYERKTNYLNFFDCSSLGLPHLRNSDQIYPSSQDMIRCPTYVSNSDESVLELDLTSCSKMFNIISQASASDLRVNRLSLRWSEPNCGECEEKGNTCKWKKNSTTEIECVDCSPKRTIQIPKYSIFIATGSIVLGLVVIAVFKMVHHFKKKEEDQARVDKFLEDYRADKPARFTYADVKRITGGFKEKLGEGAHGAVFRGKLSNEILVAVKILNNTEGDGNDFINEVGIMGKIHHINVVRLLGFCAEGLHRALVYNLFPNAQNFNVLYPDWIHNLVDGDIHIHVEDEGEVKIAKKLAIVGLWCIQWQPVNRPSIKSVIQMLESAEENQLTVPPNPFHSTSSTSTGRLISTRRPMELDVIQE*


CDS Sequence:
>Vu_02219.1
ATGGCGGAGTCTAGTGTGCTACCACTCCAAGGTGAGTCCTTATTGATAACTCTACTGTTAATGTTCTTGCTTATCGTAAGTAGCAGCGGTGAAAAAGAGTGCTCGAAATTGCCTTATTGTCAGTCTGGAGGACCGCCTATTAAATTTCCCTTCCAACTCGTCCAGGGGATGAAAGATGCATGTGATTCTCCTGGTTTGTGTGTATATTGTAGTGAAAATAAGGAGACCATGCTTCTTCACCCTACAGTAAAACTCCGTGTTACAAACATAGACTACCAGAATCAGTTTATTTACTTGACAGATCCAGAAAATTGCCTTCCGAAGAAGTTTCTAAAGCTCAACAATTTTACGATTCCTCCTTACCAACTTGATTTATCATACGAACGAAAAACAAACTACTTGAATTTCTTCGATTGTTCTTCACTTGGACTTCCGCACCTCAGAAACAGTGACCAGATATACCCGAGTTCGCAAGACATGATTCGTTGTCCGACTTACGTTTCTAACTCTGACGAAAGTGTCCTTGAATTGGACCTAACATCTTGTTCCAAGATGTTCAACATCATTTCGCAGGCCTCGGCATCTGACCTGCGGGTGAATCGGTTGAGTTTGAGATGGTCCGAACCAAACTGTGGTGAGTGCGAAGAAAAAGGCAATACATGTAAATGGAAGAAGAACAGCACAACGGAAATCGAATGTGTAGACTGCAGTCCCAAACGAACCATTCAAATTCCCAAATATTCGATTTTCATTGCTACAGGTTCTATTGTTTTGGGGCTGGTGGTTATTGCAGTGTTTAAGATGGTGCACCATTTTAAAAAGAAAGAAGAAGACCAAGCTAGAGTGGATAAGTTTCTAGAGGATTACAGAGCAGACAAGCCTGCAAGATTTACCTATGCTGATGTAAAAAGAATCACTGGTGGTTTTAAAGAAAAGTTAGGGGAAGGAGCTCATGGAGCTGTGTTTAGAGGAAAACTTTCAAATGAGATTCTCGTGGCTGTGAAGATCCTCAATAATACGGAGGGAGATGGGAACGATTTCATCAATGAAGTTGGAATTATGGGAAAAATTCACCACATCAACGTGGTTCGTTTGCTTGGTTTTTGTGCTGAGGGACTCCATCGTGCTCTTGTCTACAATTTGTTTCCAAACGCACAAAATTTTAATGTTCTGTACCCGGATTGGATCCATAACCTGGTTGATGGAGATATCCATATTCATGTTGAGGATGAAGGTGAAGTTAAAATTGCAAAGAAACTGGCAATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACAGACCATCCATAAAATCTGTCATACAAATGTTAGAAAGTGCAGAGGAAAACCAGTTAACTGTTCCTCCTAACCCATTTCACTCAACGTCCTCCACTTCTACTGGTAGACTCATTTCAACAAGACGTCCTATGGAGTTGGATGTGATTCAAGAATGA


Promoter Sequence:
>Vu_02219::LG1:28201976-28203976(-)
ACAAAGTTAGAAATGTCTACGAAAATGATTATCTATAGAGAATAAGGAATAAAGTTTAATATACGTAGGTTGAATATTTTAAATGATAATTACATAATAAAGGGCTATACCAAATATTAAAAAAAAATTATAAGTGTACACCTCCACAAAAATACACCTATTTCATATTTTTACTAGTTAGTTAAATTAGTGTAATATTTTGACTAAATTAGTATAACTATTAGTTAATTCCATATCATCAACTTTGTAATAATATGAAAAGTCAATTATCACTCAATTAGAACATAGAAGCATGATATCTTAATTTTTTTAAGATCACAATACTTTGATTAAACCAATACAATATATTAGTTAAATTACAGCATAATTTGAGTTAAAATCTATATAAACAGTACCAAAGGTATATACAATTTAAATTTAAATAGTGTACATCTATCAGCATAAGCATTCATATCTTAAATTTCGCAATGGTCACAAGAAATTCATAATATATAGAATGAAGTATATTTACTTTCTTACCACATATACTCAAAATTGACAGGAACCTGTGGCAGTTGGGCGAGCAATCAACCCTCCCGGAAGTGTCCCATATGCAGGACCTATCCATTGAATTTGCACAAATGTCCTTGCAGGCGCGATTCATCCACGAAATCTCAAACCCATACGCTAGTGCCTTGTGCATCTCACTGTAGGAATATTGATGTGTGCGCAAACCCCACCAAGATGTGGGAGTAACCAGCTTTACATTACAACCAACTTCTAACTCCTCGGATATTAGGTCCCCAGCTATAGCATATGTATAACCTTTGGAGTGCCAATTCACGCAGGGAGCAGTATCTACATACTTACCATTGTCACTCACGGTATGGTTACAATTCATGAAAACTACATGTTCGGAAACCGGCTTTGGACGAACTGCGTGGATTCTTATATGATTAAAATAGATAGTTTCGGATAATCGTTCTTGAGTAATTTGGTATGCATCCATATCGAGGTAATTATAGGTATCACTGAAATTGGATGGAGACAAGAAATAGCGAGGAATGGAGGAGCAATTTGATTGCCGAACACCGGGATCAACCACTCGGATTGTGAAATTATTGTAGTTGATGGCCTGCACATGGTATTTTCCGGAGTACAAAGATAAAATTGTAACGTTATTTTCACAGGCGAGCTCGTACCTGTGGTCGCCGCAGCGATCTGGGTCGCCTTTTAGTCGGAATGGATGCGTTATGTTGGTGACTTTGCCACAGGAAGAAGGGAGACACGAATGAACATAGTGCTTTGTAGCAGAAATTTGCTGAAATCGAAACAGCAGAATCACCAATAACGCACTCTCTCTCCACATACCGTTTCTTCTCGAATCTCAACGATGAAGGCAGAGATTCGCCCTGACGAATTTTGTTTTGGTGGTATCTTTTTCTTTTATCGAGTTTTTATTTAGGCTAATGTTACTATACAATGTTAAACAATGCAAGAGATATGAACACGTTTTAGAAAGAAATTGAAAAAAGATAATATTATATTATATAGAATATTCCACAAACCATTTTACAAAATAGTTTTTTAATATTGAATTATGCTTAAAATTTCTCTTCTTAACCTGTATCAAAGTCTATCTTTTAAAAAATTGATTTATTGAATTTATTGTTGATTCTGTTATCAGTGTTATCATGCTATCAGTTAGTAGGTTCGTGGAAGTTACCAATATACGTGTTGAAGAGTCACGAGTGGGCCTTGCATTCCAAATCGCATTTAAGATTGGAGAAGACTTGGAACAGGGGACTACGTTTCTTTCCTTGGAAAATTCAGCAATAACACTTAAAACACAGACGTAGACTTTGACGAAAAACTGCGATTTTGGATCCTTTCTTTCTAACGGGATTCCTAGGGTGACTGTAAATAGTAATAAAGAAACATATAAAATAGTGCAAAGATAAATCAAGTTTGGTTGTCTCTCGTTTATTTCACAAAAGAGATAAAGCACCTGCAATTCTGGG


Gene Sequence:
>Vu_02219(-)
ATGGCGGAGTCTAGTGTGCTACCACTCCAAGGTGAGTCCTTATTGATAACTCTACTGTTAATGTTCTTGCTTATCGTAAGTAGCAGCGGTGAAAAAGAGTGCTCGAAATTGCCTTATTGTCAGTCTGGAGGACCGCCTATTAAATTTCCCTTCCAACTCGTCCAGGGGATGAAAGATGCATGTGATTCTCCTGGTTTGTGTGTATATTGTAGTGAAAATAAGGAGACCATGCTTCTTCACCCTACAGTAAAACTCCGTGTTACAAACATAGACTACCAGAATCAGTTTATTTACTTGACAGATCCAGAAAATTGCCTTCCGAAGAAGTTTCTAAAGCTCAACAATTTTACGATTCCTCCTTACCAACTTGATTTATCATACGAACGAAAAACAAACTACTTGAATTTCTTCGATTGTTCTTCACTTGGACTTCCGCACCTCAGAAACAGTGACCAGATATACCCGAGTTCGCAAGACATGATTCGTTGTCCGACTTACGTTTCTAACTCTGACGAAAGTGTCCTTGAATTGGACCTAACATCTTGTTCCAAGATGTTCAACATCATTTCGCAGGCCTCGGCATCTGACCTGCGGGTGAATCGGTTGAGTTTGAGATGGTCCGAACCAAACTGTGGTGAGTGCGAAGAAAAAGGCAATACATGTAAATGGAAGAAGAACAGCACAACGGAAATCGAATGTGTAGACTGCAGTCCCAAACGAACCATTCAAATTCCCAAATATTCGATTTTCATTGCTACAGGTGAGACCAGACTCTATGACATTACTTGACTTAGTTTCTAATTTTCTCTCTCTGTGAGTGAGTTTAATCCAGTCTCCCTATGCTATTGTAGGTTCTATTGTTTTGGGGCTGGTGGTTATTGCAGTGTTTAAGATGGTGCACCATTTTAAAAAGAAAGAAGAAGACCAAGCTAGAGTGGATAAGTTTCTAGAGGATTACAGAGCAGACAAGCCTGCAAGATTTACCTATGCTGATGTAAAAAGAATCACTGGTGGTTTTAAAGAAAAGTTAGGGGAAGGAGCTCATGGAGCTGTGTTTAGAGGAAAACTTTCAAATGAGATTCTCGTGGCTGTGAAGATCCTCAATAATACGGAGGGAGATGGGAACGATTTCATCAATGAAGTTGGAATTATGGGAAAAATTCACCACATCAACGTGGTTCGTTTGCTTGGTTTTTGTGCTGAGGGACTCCATCGTGCTCTTGTCTACAATTTGTTTCCAAACGGTTCGCTACAGAGTTTCATATTTCCACCGGATGACAAGGACCATTTTCTTGGCTGGGAGAAGCTGCAACACATTGCTCATGGCATTGCTAAAGGGATTGAGTATCTTCATCAAGGTTGTGATCGTCCCATTATTCACTTTGACATCAACCCTCACAATGTGTTACTCGATGAAAACTTCATCCCGAAAATTTCTGACTTTGGCTTAGCCAAATTGTGTTCAAAGAATCCTAGTTTGGTGTCCATGACAGCTGCAAGGGGAACCTTGGGATACATTGCACCAGAAGTTTTCTCCAGAAACTTTGGAAATGTGTCTTATAAATCCGATATCTACAGTTATGGAATGTTATTGTTGGAAATGGTTGGAGGAAGGAAGAATGTTGACATATCTTCAGCACAAAATTTTAATGTTCTGTACCCGGATTGGATCCATAACCTGGTTGATGGAGATATCCATATTCATGTTGAGGATGAAGGTGAAGTTAAAATTGCAAAGAAACTGGCAATTGTTGGACTTTGGTGCATTCAGTGGCAGCCAGTGAACAGACCATCCATAAAATCTGTCATACAAATGTTAGAAAGTGCAGAGGAAAACCAGTTAACTGTTCCTCCTAACCCATTTCACTCAACGTCCTCCACTTCTACTGGTAGACTCATTTCAACAAGACGTCCTATGGAGTTGGATGTGATTCAAGAATGA