Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02398 LG1 32393892 32396127 PREDICTED: uncharacterized protein LOC108338680
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to jasmonic acid, anatomical structure maturation, oxoacid metabolic process, defense response to bacterium, response to red or far red light, response to jasmonic acid, defense response to bacterium, developmental growth, oxoacid metabolic process, root morphogenesis, defense response to fungus, defense response to fungus, cell differentiation, plant epidermis development, defense response to fungus, response to inorganic substance, response to oxidative stress, root morphogenesis, defense response to bacterium
Cellular Component   is active in   cytoplasm
Cellular Component   located in   extracellular region, plant-type vacuole
Molecular Function   enables   protein kinase binding
SNP Position Effect Amino acid change
C/T 32393896 synonymous_variant p.Glu609Glu
T/G 32394123 missense_variant p.Ser534Arg
T/C 32394152 missense_variant p.Lys524Arg
T/C 32394162 missense_variant p.Asn521Asp
A/C 32394268 downstream_gene_variant
G/T 32394269 downstream_gene_variant
C/A 32394273 downstream_gene_variant
C/G 32394279 downstream_gene_variant
T/C 32394410 downstream_gene_variant
T/C 32394467 missense_variant p.Lys485Glu
A/T 32394621 downstream_gene_variant
T/A 32394968 synonymous_variant p.Leu350Leu
C/T 32395025 synonymous_variant p.Ser331Ser
G/A 32395035 missense_variant p.Ser328Phe
A/G 32395182 missense_variant p.Ile279Thr
T/A 32395201 missense_variant p.Ser273Cys
T/G 32395252 synonymous_variant p.Arg256Arg
G/A 32395541 synonymous_variant p.Arg159Arg
G/C 32395782 missense_variant p.Ala79Gly
G/T 32395881 missense_variant p.Thr46Asn
C/A 32396005 downstream_gene_variant
A/C 32396043 downstream_gene_variant
A/G 32396060 downstream_gene_variant
C/T,* 32396071 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02398.1
MAMCFSILTVRKEKYKGSGSGRSSKEDFSTLLAKLQSSKIASVPTTFDATLSNGIPKNSSFNSGVMSPDTCVEAEVREAYEREDEDEDSLKIKREISDFHLQDHEAVADKGYGATDKEIEYPILYENQVNEESDDRTDKYSQKSVETTESGLVSDPGIRKADLWTSAKFKRHFSNLEKFDEHGTKTRFLSALKSKPFDDFKELSAMVNLESPWSVKSHYSADRVVLKRHSSSQLLPSGKKKLWWKMILRSHRNIHRTFSGNSTLVPASAALNSGYSSDILEPKQGKTMRPVKSSGSITAESFNKRRTGKSTDNKKGSRFQSDQWLAFSKASSSSFARVDAWVKGLEIQQLLPEDDFDVDNGRSITFPPSPDTGGTMMRATSQLTYADANFSKETLTAISVVQSLNPASSIAHISGIGVKAIPAISHLSNLRSVNLSNNFIAHISPGFLPKGIQTLNLSRNKISTLDGLRELTKLRVIDLSYNRISRIGQDLSFNKITTTKAIGQLVANYNSLKALNLLGNPIERNISYGELTKAVSGLLPKLVYLNKQPLKAQRTREILSDSVARAALGNSTRSCDKRSIRKLTHGGSTLSKGYRRSASASHKSTNRTRR*


CDS Sequence:
>Vu_02398.1
ATGGCTATGTGCTTCTCTATTTTGACTGTAAGGAAGGAGAAATACAAGGGAAGTGGAAGTGGAAGGTCTTCAAAGGAAGACTTTAGCACTCTACTTGCCAAACTACAATCTTCAAAAATAGCATCAGTGCCAACCACTTTTGATGCCACATTATCCAATGGTATTCCCAAAAATTCAAGTTTCAATTCAGGGGTTATGAGTCCTGATACTTGTGTGGAGGCTGAAGTACGGGAGGCTTATGAACGGGAAGATGAGGATGAAGATTCACTGAAGATCAAGAGGGAAATCTCTGATTTTCATCTCCAAGATCATGAAGCTGTTGCAGACAAAGGATATGGTGCCACTGATAAAGAAATAGAGTATCCTATTTTGTATGAAAATCAAGTCAACGAAGAATCGGATGACAGAACCGACAAATACAGCCAAAAGAGTGTTGAAACAACCGAAAGTGGACTCGTCAGTGATCCTGGGATTCGCAAAGCTGATTTGTGGACTTCTGCAAAGTTCAAGAGACACTTCTCTAACCTTGAAAAGTTTGATGAGCATGGTACGAAAACTCGTTTTTTGTCAGCTTTAAAGTCAAAGCCTTTTGATGATTTTAAGGAATTATCAGCAATGGTTAATCTTGAAAGCCCTTGGTCAGTGAAGAGTCACTACAGTGCTGATAGAGTAGTGCTGAAAAGGCATTCTTCAAGTCAGTTACTTCCTTCTGGAAAGAAAAAATTGTGGTGGAAAATGATCCTGCGGAGCCACAGGAACATACACAGAACTTTCTCTGGCAATTCAACGCTGGTTCCTGCCAGTGCTGCATTAAATAGTGGGTACTCTTCAGACATCCTTGAACCAAAACAAGGAAAGACAATGAGGCCTGTGAAATCCTCTGGTTCAATTACTGCAGAATCCTTTAACAAAAGAAGAACTGGTAAAAGTACAGATAATAAAAAGGGGAGCAGGTTTCAAAGTGACCAATGGCTTGCTTTCTCCAAAGCGTCGTCATCCTCTTTTGCCAGAGTGGATGCATGGGTGAAAGGTCTTGAAATTCAACAACTACTTCCTGAGGATGATTTTGATGTTGACAATGGCAGAAGCATAACCTTCCCACCTTCCCCTGATACTGGTGGAACAATGATGAGAGCCACATCTCAGTTGACTTATGCAGATGCCAATTTTTCAAAAGAGACTTTAACTGCCATTAGTGTAGTCCAGTCTCTAAATCCAGCTTCATCTATTGCTCACATATCTGGTATTGGTGTAAAAGCCATCCCTGCTATTTCACACTTATCCAATCTCCGCTCTGTCAACCTGTCAAACAATTTCATAGCTCACATCTCACCGGGATTTCTACCAAAGGGTATTCAAACACTTAACTTGTCAAGAAACAAGATCAGCACTCTTGACGGCCTCAGAGAATTGACCAAGTTGCGGGTAATTGACCTGAGTTACAACCGCATCTCAAGAATTGGACAAGATTTGAGCTTCAACAAGATCACAACAACAAAAGCAATAGGCCAGCTAGTAGCTAACTACAACTCACTTAAGGCTCTTAATCTGCTGGGAAATCCAATTGAAAGAAACATCAGCTATGGCGAGCTAACTAAAGCAGTCTCTGGTCTTCTTCCAAAGTTGGTGTACCTTAACAAGCAACCACTCAAGGCTCAAAGGACACGCGAAATATTAAGTGACAGTGTTGCCAGAGCTGCCCTTGGGAACAGCACGCGGAGCTGTGACAAAAGATCAATAAGAAAACTTACTCATGGAGGATCAACTCTTTCCAAAGGGTATAGAAGAAGTGCAAGTGCTTCCCACAAAAGCACGAACCGAACAAGGAGGTGA


Promoter Sequence:
>Vu_02398::LG1:32396127-32398127(-)
AACAAAAACTAATTAATTATTACTCTTTGTTATAACCACTGAGTAATTACCTTTATAAAATAGTAATTTAAAATATGCAATGGAATATATGTAGTTAGAGATTGAAGAGGAATAAAAACCCATAAAAAGAAAACACACCTTTTTATTAATCAGACGCAATTGCAGAGTAACAGGTATCATTCTTACAATCATGAAAAGAAAAAATACTTTTTTATTAATCATACAAAATGTACACTGAAAAATATCTACATCTACACGAAAAGGAATAGTGGTTAGTATTTGAGTGATTGAAAAGGAGAGAAACCATAAAAAGAAAAATACACCTTTATATTACTCATATTGTACTGAAAAAATATCTAAACATTAGTGACTGAAGAGAGAAAAACTCCTTGTTCAGAATCTTTAAATTCAATCAACATATTATCCGACTTAAAAATTAAAATTCTATCACAATTTTATTTTTAAAAAACATTAAAAGATAATTTTTATTACTATTTTATCTTTAAAAGAACATATAAAAAAGAAAGAGAAATCATAAAGAAAAAAATACACACCTTTTTATTATTCACACAATTGCACACAGAAAAGGATCTACATGAAAAGGTACAATACTTGGTATAATAGCGATTGAAGACAGAAAACTCACCAAAAAAAATATACTTTTCATTAACCACACGCAATTGGACACACAAAATGTTTACAAATAGAGAGACAGCTGAGAAAAAAAAAGGAATAAAATAAACAGTCTGATATTGAAAAATACACAGAAAACATTTTAGTTAATATAGGAAGAGTAAAACTTATATAAATAAGGGAGTAATGGCAATTTAAGTTTGAACAGACTCTAAAGTTGATCATAAATTTGCTCGGACTTCAAAATCGATAATGAAGCCAATTAAATTTTGGTGTTATGCTGCTGCAGAAGTGAGAGAAAAAAAAAAGGTGATAGAGAATTTTGAAGAATATAAATACTGAGTTATGCATGGCCTACATGTGTGTGGCATATACACACTAAATTAATAGAATATCACACGTCCCTCTTTCCGTGATTTCACAGGTACAAACTAGAAAGATAGAAAAAACCTCTTTCTCTTTCTCTTCTTTTTCTTTCTCATTCTTAACGATAAATACTAACTACCTCTCTGTGTTTCTCTTCGTCTGGTGTTTTGCATTTGCATTTCTTACACGACATCACGTGACGACACCACATAACACAATCTTAACTTTATAACTATTGAGCATCCCAAAGCTTTTGAAGATTCCCGAGCAAAAGCACAGATACTGTTTGAGAGGTTATTGTTGTCTTTGAGGAGCTGGCTCTGTTCTACTTTACAAGGTTCGTCTTTTCTGCACTAATGCTACCAATTCTCGCCGCAATTTTCGTGTGGTTGTGCCTGCTTTAGAATCATGAGCAGAGGAGGCATTAGGGTGTGTATCCCTTTTGACTTGTGTTTCAATCATTCAAGTCTTGTATTCATTTAGCCACTTCATTCTTCTTCTTATTGTATCTCAGAGGTGTATATAGTTTAGAGTGTTTATGAAGTTATTATCTGATTTTCATTGTTTCATTTGGGATTTCATGAGATGAATGTTTGGCACATTTATTTGCTTCTTTTTTTATTATTGTTCTTCAACTGGGTATAGGCCTGTTTGGAGAGGAAGATATTGTGGACTGTGGACACACAGAACTCTGGCCAACTCTCTAGAGATATCTTCACAAACCGGAATAGGCTTTGGTCTTTTTCTTTCTGGTTTTCTGATTTGCTCAGAGAGAGTGTTTTCTCTTCTCCAGCGCCTTCCCATTGATTATGGCTAACATTTGGTTCAATGTGATTGCTGAACTACTAGTGTGGTTTTTTGTATTGTTGTGAAAGGAAGAAAATTGTAGATTTATGTGGAAAGCTGTCTAGGATTTCTTATAAGAAAGTGCAACCGACTCAAAAGCCATAGAGAAGATAAAATTGAAGGGTTGGAACAAACCTTATCTTTTGGTGGCAATC


Gene Sequence:
>Vu_02398(-)
ATGGCTATGTGCTTCTCTATTTTGACTGTAAGGAAGGAGAAATACAAGGTAAGAAAGTCAATTAGGATTTGTGTCTCTTGTTTTTTTTTATGGAGTTCCTATAAAACTTGTGAATTGTGATTGAATTTATATTATCTCAATTTTGTTTGTTTATTCAGGGAAGTGGAAGTGGAAGGTCTTCAAAGGAAGACTTTAGCACTCTACTTGCCAAACTACAATCTTCAAAAATAGCATCAGTGCCAACCACTTTTGATGCCACATTATCCAATGGTATTCCCAAAAATTCAAGTTTCAATTCAGGGGTTATGAGTCCTGATACTTGTGTGGAGGCTGAAGTACGGGAGGCTTATGAACGGGAAGATGAGGATGAAGATTCACTGAAGATCAAGAGGGAAATCTCTGATTTTCATCTCCAAGATCATGAAGCTGTTGCAGACAAAGGATATGGTGCCACTGATAAAGAAATAGAGTATCCTATTTTGTATGAAAATCAAGTCAACGAAGAATCGGATGACAGAACCGACAAATACAGCCAAAAGAGTGTTGAAACAACCGAAAGTGGACTCGTCAGTGATCCTGGGATTCGCAAAGCTGATTTGTGGACTTCTGCAAAGTTCAAGAGACACTTCTCTAACCTTGAAAAGTTTGATGAGCATGGTACGAAAACTCGTTTTTTGTCAGCTTTAAAGTCAAAGCCTTTTGATGATTTTAAGGAATTATCAGCAATGGTTAATCTTGAAAGCCCTTGGTCAGTGAAGAGTCACTACAGTGCTGATAGAGTAGTGCTGAAAAGGCATTCTTCAAGTCAGTTACTTCCTTCTGGAAAGAAAAAATTGTGGTGGAAAATGATCCTGCGGAGCCACAGGAACATACACAGAACTTTCTCTGGCAATTCAACGCTGGTTCCTGCCAGTGCTGCATTAAATAGTGGGTACTCTTCAGACATCCTTGAACCAAAACAAGGAAAGACAATGAGGCCTGTGAAATCCTCTGGTTCAATTACTGCAGAATCCTTTAACAAAAGAAGAACTGGTAAAAGTACAGATAATAAAAAGGGGAGCAGGTTTCAAAGTGACCAATGGCTTGCTTTCTCCAAAGCGTCGTCATCCTCTTTTGCCAGAGTGGATGCATGGGTGAAAGGTCTTGAAATTCAACAACTACTTCCTGAGGATGATTTTGATGTTGACAATGGCAGAAGCATAACCTTCCCACCTTCCCCTGATACTGGTGGAACAATGATGAGAGCCACATCTCAGTTGACTTATGCAGATGCCAATTTTTCAAAAGAGACTTTAACTGCCATTAGTGTAGTCCAGTCTCTAAATCCAGCTTCATCTATTGCTCACATATCTGGTATTGGTGTAAAAGCCATCCCTGCTATTTCACACTTATCCAATCTCCGCTCTGTCAACCTGTCAAACAATTTCATAGGTACAACTTGGAACTAGAATGTAGCACTTGATGCAACATCAATAAATCAATCACTAACTGCATTTACTGATTCATTTCTTAACGTTGACCATGCAGCTCACATCTCACCGGGATTTCTACCAAAGGGTATTCAAACACTTAACTTGTCAAGAAACAAGATCAGCACTCTTGACGGCCTCAGAGAATTGACCAAGTTGCGGGTAATTGACCTGAGTTACAACCGCATCTCAAGAATTGGACAAGGTTAGCTTTGATATAAGTTGATGCTCAAAGATGTTAGCATTTCAAATTTGTTTAGCCTTCATTTTCAGTTTTTTCCATTTCATTGTGTGGTTTGTCAGGTTTGTCAAGTTGCACACTTGTCAAAGAACTATATCTTGTGGGGAACAAGATAAGTGATGCTGAAGGGCTACACAGGCTATTGAAACTAACACTTCTAGATTTGAGCTTCAACAAGATCACAACAACAAAAGCAATAGGCCAGCTAGTAGCTAACTACAACTCACTTAAGGCTCTTAATCTGCTGGGAAATCCAATTGAAAGAAACATCAGCTATGGCGAGCTAACTAAAGCAGTCTCTGGTCTTCTTCCAAAGTTGGTGTACCTTAACAAGCAACCACTCAAGGCTCAAAGGACACGCGAAATATTAAGTGACAGTGTTGCCAGAGCTGCCCTTGGGAACAGCACGCGGAGCTGTGACAAAAGATCAATAAGAAAACTTACTCATGGAGGATCAACTCTTTCCAAAGGGTATAGAAGAAGTGCAAGTGCTTCCCACAAAAGCACGAACCGAACAAGGAGGTGA