Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_02605 LG1 39132931 39136366 PREDICTED: ABC transporter I family member 17
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   signal transduction, cellular response to organic substance, phosphate ion transmembrane transport, monocarboxylic acid metabolic process, cellular response to organic substance, response to inorganic substance, phosphate ion transmembrane transport, monocarboxylic acid metabolic process, response to metal ion
Cellular Component   located in   plasma membrane, plasma membrane, plant-type vacuole
Molecular Function   enables   inorganic phosphate transmembrane transporter activity, transmembrane transporter activity
Pathway   B 09183 Protein families: signaling and cellular processes   C 02000 Transporters [BR:ko02000]
SNP Position Effect Amino acid change
C/A 39133039 synonymous_variant p.Gly390Gly
T/A 39133181 missense_variant p.Asp343Val
G/T 39133393 synonymous_variant p.Ser272Ser
T/C 39133494 upstream_gene_variant
A/G 39133536 upstream_gene_variant
G/A 39133539 upstream_gene_variant
T/C 39133560 upstream_gene_variant
T/A 39133648 upstream_gene_variant
C/T 39133706 upstream_gene_variant
C/T 39133754 upstream_gene_variant
A/G 39133789 upstream_gene_variant
T/C 39133814 upstream_gene_variant
C/A 39133839 upstream_gene_variant
G/T 39133846 upstream_gene_variant
T/C 39133879 upstream_gene_variant
A/G 39134218 upstream_gene_variant
T/C 39134237 upstream_gene_variant
G/A 39134267 upstream_gene_variant
T/C 39134468 upstream_gene_variant
T/C 39134587 missense_variant p.Ile257Val
T/C 39135032 upstream_gene_variant
G/A 39135102 upstream_gene_variant
T/A 39135177 upstream_gene_variant
G/T 39135299 missense_variant p.Pro246Thr
T/C 39135449 missense_variant p.Met196Val
A/T 39135598 upstream_gene_variant
T/C 39135730 missense_variant p.Thr136Ala
C/T 39136246 missense_variant p.Ser14Asn
T/C 39136269 splice_region_variant&synonymous_variant p.Gly6Gly
G/A 39136308 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_02605.1
MSSLLDDCREHLLEVDANAKPKFQIKNLTRVSDGGVSILKGINLDIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSASVLLDGQDISHLDVLSLRRKVGMLFQLPALFQGTAADNVRYGPGLRGKKLTDDEVRKLLAMADLDASFMDKSGDELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKNRGMTVIMVSHSIKQIQRIADIVCLLVDGEIVEVLKPDKLSEAKHPMARRGDRTDEHSRNDRCVLQGMWSTGSFFHDRSTTLGTLMGVSFPAITFRASDSHPHSTISAAAAVAGPQRAAESKKKKAIVAAERRRKWWWLCRDGDARPASLGEFLEVERRCGDGAFFGTAAELEGMVMDSPRNHGRALFSDGRVLPPSSVDEGASTAGSICSRFPVLLTGICSGGAG*


CDS Sequence:
>Vu_02605.1
ATGTCTTCTCTCCTAGATGATTGCAGGGAACACTTATTGGAAGTGGATGCAAATGCCAAACCCAAATTCCAGATAAAAAATCTCACCAGAGTTTCCGATGGTGGGGTTTCAATCCTCAAAGGCATCAACCTTGACATCCCAAAGGGTGTCATCGTCGGGGTCATAGGCCCCAGCGGCAGCGGCAAGTCAACGCTCTTAAGAGCCTTGAACCGCCTCTGGGAACCGCCCTCCGCCTCCGTCCTCCTCGACGGCCAAGACATCTCCCATCTCGACGTTCTCTCCCTCCGCCGGAAAGTTGGCATGCTCTTTCAACTCCCCGCCCTCTTTCAAGGCACAGCTGCTGACAACGTGAGGTATGGACCAGGGCTTAGAGGGAAAAAGCTAACTGATGATGAGGTGCGCAAGTTACTGGCGATGGCGGACTTAGACGCTTCTTTCATGGATAAGTCCGGGGATGAACTCTCTGTGGGTCAAGCACAAAGGGTTGCACTTGCTAGGACTTTGGCTAATTCACCGGAGGTTTTGTTGTTAGATGAGCCTACTAGTGCGTTAGATCCTATATCGACAGAAAACATAGAGGATGCCCTGATGAAGCTGAACAAGAACAGGGGCATGACAGTGATCATGGTTTCTCATAGCATCAAACAGATCCAGAGGATCGCAGACATAGTGTGCCTGCTTGTTGATGGTGAAATTGTTGAAGTTCTGAAGCCTGATAAACTCTCTGAGGCCAAGCATCCCATGGCACGAAGGGGAGACAGAACAGACGAGCATAGTCGGAATGATAGATGTGTTTTACAGGGCATGTGGTCTACGGGATCCTTCTTCCATGACAGAAGCACCACACTGGGCACTCTTATGGGTGTCAGCTTCCCGGCTATTACCTTCAGAGCCTCCGACAGCCATCCACATTCAACCATCTCCGCTGCCGCCGCCGTGGCTGGCCCCCAGAGGGCTGCAGAGTCTAAGAAGAAGAAGGCCATCGTGGCTGCGGAGCGGCGGCGGAAGTGGTGGTGGCTGTGCAGGGATGGCGACGCGAGGCCGGCTTCTCTCGGTGAGTTTCTTGAGGTGGAACGGCGTTGCGGCGATGGCGCGTTTTTTGGTACGGCGGCGGAACTTGAAGGAATGGTGATGGATTCGCCAAGGAACCACGGCCGGGCTTTGTTTTCCGACGGGAGGGTTCTTCCTCCGTCGAGCGTTGACGAAGGAGCATCGACGGCGGGAAGTATTTGCAGTAGATTTCCAGTTTTGCTTACCGGGATCTGCAGCGGCGGCGCCGGATAA


Promoter Sequence:
>Vu_02605::LG1:39136366-39138366(-)
GCCACACTCACGTCTTGACGCGTGTACTTATAAGCCAAAGCCATCTTGGACTGCATGTTGCCGCCCTCGGCGGCGAAGTGGTGATATAAAAACGCCTTCCCCTTGCTTCGCTCTCTCAAAAGCCCCATTTCCCACAAAAACCCTAGAACCGATTGCGCGGCGGGATGGCCGGTCTCGGCTGCGGCAGCGATCTCTGCGGCGCCGTCCTCAATGAGGGCGGGGTTACCGGACATGAGCTTGTCGACGGCGGAGTAGTAGGCAGCGTCGGGTTCCGAGAGAGGCTGGGGTTCTCCGGAGGGGGGCTCGAAGATGGGGCGCCATGAACCAGGGTCGAGGTCCTCCTCGGATTTGTGGGCGTCTCCATCGCCGAGCTCGTCCCATTCGGCAGAGGAATCGGGTTCGGCGCCAGGGTCGTCCTTGAAGTCTTCCTGAGATAGCACGAGCACGAATTGGCGTGCGGCGACGGAGCGAGAGAGAGTGAGGAGAGAGAGAGAGAGCGCGAGAGAGAGGAAAAACCACTTGGGGCGAGACATGCTTCTTGCCGCGGTGCTGTACGGACGAGGATTGCAATCACGCACAGTTTTTGGGACTAAATGGGAAGGAAACGCAGTTGCAGGGGTATTCTTGCAATTATAATCTTCAACTTCTCTTGCCACGTTTATTGATGTACCTCTCTCCACTAAGAAATTGCCACGTCAAAATTCCTCAACTCATCTTTGCCAAACTTTGACTTTCTTTTTAGGCCTTAGTCTGCATTACTCGTTTTAAGTGAAGCATTTGCTTCATTAATTTTAATTAAATATATAATTTAATTTTATAATTTTAAGTATCAAGAGAATACTATTTTTATGTGTTTGGATTGGTAAATTTTAATAGAGTAAATTGTTTTTTTAGAAAATTTAAAATATTCTATGGTAAACTAGTTGTTTGGATAAAAAAGTTTATAAGAAATTGAAACTTTAAAATTTTATTAAAATAATTAGATTAGATCATTTTAAATTACATCTAAGTATAAGAATTTGAAACTATTTATATTCTAGCATTTTGATCTTTGGATTTTCCTTTCAACTTAAATTTTAATTGTAGACGTCATAAATTTTATCAAGAACGATATATTCTCAACTGTTGATTTACATTTTTTTTATTGATGTTAATCAGTGTTATTCTGTTATATAATTTATTAGAAGTTCTGTATTAGTTGAAGTTTTTTCAATTAATGTCGAGAGATTATTTTTCTGTTAATGTGAATTAAATATTTTTCAATCAATGTTGTCATGATTATCTTTTTGTTGATTGCTTATTTTTTTCATCAGCATAAATGTTACTTTTTTGTCAATAAACTATAATATATTTGTTTTACTATTGATTACATATTTGATTAACATTAATTAGTTTTTTTTTATCAATAGAGAACATTTTCCAATTTACAGTGATACAAAAATCGTACAAATAATCTTGGTTACTCTTAATTTAAGTAATTATATTCGATATTAACCAAAAATAATATTATGAGAAAAGTTTTGCAAATATCAATTAAAAAAATATTGACAAACCTTAACTAAAAAATAATATAGATGAAATGAAAAAAATAAATTATTTTCACATTTTGTAATGTTTAGTAATTATTTAATATTTAACTAATTTGTTTATTTTGTGATAATTGAAATATTTCATTCCAATAAAAAAATCTAAATTTATTAAATTTGAATTGTATTATTCAAATAAAACATCTAAAAACAATGAAAAAATTTAAAATTATATCTATTCAAATTCAACATATTTAAATGTTTTGAATTTGTAACTGTGAAATCATTTATCCAAAAATAAGTTAAATGTCTCCTTCTTCAAAACATGACTTCAATAATTTATAATTTGCAAGGGTGGAGTCATCTACTGGAAGAATCTGTGAGGTCTGGGGCAGGCTCTTTCTTCTTCACCCAATTCTTTCATATTCTTCTTCAATCTTCCATCTTCAATCTTCAACCTTGAAGCTCATTCTC


Gene Sequence:
>Vu_02605(-)
ATGTCTTCTCTCCTAGGTAAGCCTCCCACGATTCAGTGTTCTTAAAGTCAAAACGATGCTGTTTTTGGCTCTTTTGGACTCAAAACTCTGACAGATGATTGCAGGGAACACTTATTGGAAGTGGATGCAAATGCCAAACCCAAATTCCAGATAAAAAATCTCACCAGAGTTTCCGATGGTGGGGTTTCAATCCTCAAAGGCATCAACCTTGACATCCCAAAGGGTGTCATCGTCGGGGTCATAGGCCCCAGCGGCAGCGGCAAGTCAACGCTCTTAAGAGCCTTGAACCGCCTCTGGGAACCGCCCTCCGCCTCCGTCCTCCTCGACGGCCAAGACATCTCCCATCTCGACGTTCTCTCCCTCCGCCGGAAAGTTGGCATGCTCTTTCAACTCCCCGCCCTCTTTCAAGGTCACAACCTCTCTTCCTTTCAACTTCCCAAATTAATCACTAAATTCATTTGCTAGTTTACTGATTCTTTTTGTGTTGAAAGAAAGATTAGTTTCTTGTGGTTGATTTAAGTTTAACCTTCTGATAATGTTGGAGGGTATCTGTTCTACAGGCACAGCTGCTGACAACGTGAGGTATGGACCAGGGCTTAGAGGGAAAAAGCTAACTGATGATGAGGTGCGCAAGTTACTGGCGATGGCGGACTTAGACGCTTCTTTCATGGATAAGTCCGGGGATGAACTCTCTGTGGGTCAAGCACAAAGGGTTGCACTTGCTAGGACTTTGGCTAATTCACCGGAGGTAACATAAAACTATTTTTTTGCCTTTTAACTTTATTTTCTGTCTGTATTTCTGCTTGTGAATGTGATGTTCGTTTTATTTGGTATCTTTTGAATTGAAGGTTTTGTTGTTAGATGAGCCTACTAGTGCGTTAGATCCTATATCGACAGAAAACATAGAGGATGCCCTGATGAAGCTGAACAAGAACAGGGGCATGACAGTGATCATGGTTTCTCATAGCATCAAACAGATCCAGAGGATCGCAGACATAGTGTGCCTGCTTGTTGATGGTGAAATTGTTGAAGTTCTGAAGCCTGATAAACTCTCTGAGGCCAAGCATCCCATGGCACGAAGGTTTCTTGAACTCAGTTCTTAGGGGTCCTAATCTAAGCTAAGAGTTCGTAAAATTCTGTCTCGACTTGTTTGGATTTGAATTTTAGTCTGTTCTTGAAGCCACGATGAATGTACTTGCTGATTGTTGACCTGTTCTCCATTTTAAATCATTGAACCAATCATCTGTGATTATTTATTTCTATACGTTGCTTTCAAGGCTGCTTCATGACATTCTGGGCTGACATAGGATTGTGATAGTGGAAGTTTGGTTACAATATGATGTTTTGCAAAATGCTTCTAAATACGAATTTTGTTCTTTAAGATTACCATTGCGTCATTGTTTCTGTTTTTTATATATTTTTTTTCAATATGCTATTCAACCAGATTTCGTGCAGAAAGTTTGAGTCCCACCCACTAATCCCACTTGAAAAGTTACAATAAGATAAGGCCTTGAACAGTGAATTCTTCGGTATCCTAATATTTTCAATCATCAAATTATCCGATCAGAAATTTCAACGTTGAACAAATGAAAAACTGAAATGACCTTAAGAGTGAAACATGAGGTGTCCAATCCTTCTCACAGAAACAATCTCCAACCAATTTGAATAAAGGAAACCTTTTTATTGCACTGTTAAGAAATAGTGTAGTTTTTGTTGCTTAACGTGAATGAGTTGTGTCGTGTTAACGTGATTTTGGCAGGGGAGACAGAACAGACGAGCATAGTCGGAATGATAGATGTGTTTTACAGGGCATGTGGGTGTGGTTGTTTCATTTCCAAATTTGAATTTTTACCAGTTGTTGCAGTTCAATGCCGAAAGATACATGTCTTGTCGTTTGGATTGACGTCGACTGTTCAACAATAACCATATAAACTTTCAATTATTGCGTTCGGATTTATAATGTTTCAGATTTAGTATCTCATACCAATGTTTTATTCTGTCTCTGATTGAGTTTAAACCATGAATCTAAAAGTTGTGGAACAGAGAGAGAGAGAGGTGAAAGGTGTGAAACGGATAAGGATAAAATGATTTATAATGTTCATCCGACATCCAAATTTCCAATTTCAATAATTAAGTTAATAAAATGATTTATTTCTAACCTATATGATTCTCAATCAATTATTAATATCAGTTAATGTTTAATTACATCTAGAAAATGATCACGAACTAGATTTCTAAAAGCTTAATTATTTACAAGTTTTTAACTTTAAAACAAATAAAACACAAATTATAAAGAATTTCAAAGTTAGAAGAATAAAAAATTTTGAACAGGCAAACAAAAAGGAATATGAAAATCAAAGAAATTATAAAGCAAGAATGAATCCAAAATCTAATCCAATGGATGTGCCTCCTATATTAATGTCGGCCATACATGCAATGATTTGATTTTGAAGCATGTAAAAATATAGTCAAATTTGAAACACTGATAGCAATTACAAGACAGAAAGTCAATTTATTATACAGACAGGAAGGGAAGTAAAAAAAAAAACAGAAATAAATTGTACTAATTTGAGAACTTTGAATCTGTAATTTGGGTAAATCGAAATTACAGAGCATAGCGTTTGACGTGCATGAAGCAGGTGGGTAGCAATCTCTCAGAAGCCATCATTCATTGGTAGTACTCACAAACAGTAATCACTCAACTTAGTATTAAGTTGTATTGTAGTAACCATATTCTCATCTCAAACTAGCGTTTACAGGAACACTCAACAATGCTAGATCCAGCCACTGAACTGCTGCCACCACCATCTTCACCCACCAATTCATCCATTTCCTCCTCTGATCTTGACACCGAGGTAATACTTTTACCCTCAACAAAATCAAACCCAACTCTCGTAATTCCTAAAGTTTTGTTTTTTGCACTTATTGGTTTCATCTTATTTCTGGGTTTTCGATTTCACAGTCTACGGGATCCTTCTTCCATGACAGAAGCACCACACTGGGCACTCTTATGGGTGTCAGCTTCCCGGCTATTACCTTCAGAGCCTCCGACAGCCATCCACATTCAACCATCTCCGCTGCCGCCGCCGTGGCTGGCCCCCAGAGGGCTGCAGAGTCTAAGAAGAAGAAGGCCATCGTGGCTGCGGAGCGGCGGCGGAAGTGGTGGTGGCTGTGCAGGGATGGCGACGCGAGGCCGGCTTCTCTCGGTGAGTTTCTTGAGGTGGAACGGCGTTGCGGCGATGGCGCGTTTTTTGGTACGGCGGCGGAACTTGAAGGAATGGTGATGGATTCGCCAAGGAACCACGGCCGGGCTTTGTTTTCCGACGGGAGGGTTCTTCCTCCGTCGAGCGTTGACGAAGGAGCATCGACGGCGGGAAGTATTTGCAGTAGATTTCCAGTTTTGCTTACCGGGATCTGCAGCGGCGGCGCCGGATAA