Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03023 LG1 42969832 42972612 PREDICTED: mitogen-activated protein kinase homolog MMK2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, male meiosis cytokinesis, systemic acquired resistance, salicylic acid mediated signaling pathway, response to salt stress, phosphorylation, phosphorylation, jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway, response to fungus, cortical microtubule organization, jasmonic acid and ethylene-dependent systemic resistance, hyperosmotic response, male meiosis cytokinesis, systemic acquired resistance, salicylic acid mediated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, cellular response to carbon dioxide, regulation of stomatal closure, intracellular signal transduction, protein phosphorylation, jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway, cytokinesis by cell plate formation, jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway, hypotonic salinity response, systemic acquired resistance, salicylic acid mediated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway, cortical microtubule organization, cortical microtubule organization, jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway, cortical microtubule organization, signal transduction, systemic acquired resistance, salicylic acid mediated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, male meiosis cytokinesis, hypotonic salinity response, cellular response to carbon dioxide, cytokinesis by cell plate formation, systemic acquired resistance, salicylic acid mediated signaling pathway, response to cold, response to fungus, hyperosmotic response, protein phosphorylation, cellular response to carbon dioxide, regulation of stomatal movement, male meiosis cytokinesis, jasmonic acid and ethylene-dependent systemic resistance, protein phosphorylation, systemic acquired resistance, salicylic acid mediated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, response to abscisic acid, response to cold, pollen development, cellular response to carbon dioxide, response to abscisic acid, protein phosphorylation, response to salt stress, jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway, jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway, jasmonic acid and ethylene-dependent systemic resistance, protein phosphorylation
Cellular Component   is active in   cytoplasm, nucleus
Cellular Component   located in   nucleus, cytoplasm, cell plate, nucleus, nucleus, cytoplasm
Molecular Function   enables   protein binding, protein binding, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein binding, protein kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, MAP kinase activity, MAP kinase activity, protein binding, MAP kinase activity, protein binding, protein binding, protein kinase activity, MAP kinase activity, protein binding, protein binding, kinase activity, protein binding, MAP kinase activity, MAP kinase activity, protein binding, protein binding, protein binding, MAP kinase activity, protein binding, protein kinase activity, protein binding, protein binding, protein binding, protein kinase activity, MAP kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, MAP kinase activity, protein binding
SNP Position Effect Amino acid change
T/G 42969927 missense_variant p.His32Gln
G/A 42970272 downstream_gene_variant
T/C 42970350 downstream_gene_variant
G/T 42970515 splice_region_variant&intron_variant
G/C 42970516 splice_region_variant&intron_variant
A/T 42970542 downstream_gene_variant
T/A 42970598 downstream_gene_variant
A/G 42970623 downstream_gene_variant
G/A 42970633 downstream_gene_variant
G/C 42970665 downstream_gene_variant
G/C 42970732 downstream_gene_variant
C/T 42970764 downstream_gene_variant
A/G 42970777 downstream_gene_variant
A/G 42970852 downstream_gene_variant
T/G 42970860 downstream_gene_variant
G/T 42970908 downstream_gene_variant
T/C 42970977 downstream_gene_variant
A/T 42970985 downstream_gene_variant
G/A 42970994 downstream_gene_variant
A/C 42971164 downstream_gene_variant
A/G 42971170 downstream_gene_variant
A/G 42971335 downstream_gene_variant
G/T 42971464 synonymous_variant p.Gly189Gly
T/C 42971469 missense_variant p.Phe191Ser
A/T 42971483 missense_variant p.Thr196Ser
C/T 42971534 missense_variant p.Arg213Cys
A/C 42971645 missense_variant p.Lys250Gln
T/C 42971702 downstream_gene_variant
T/C 42971905 downstream_gene_variant
G/A 42972064 downstream_gene_variant
A/C 42972072 downstream_gene_variant
C/T 42972226 synonymous_variant p.Leu286Leu
T/C 42972356 downstream_gene_variant
G/T 42972370 downstream_gene_variant
T/C 42972504 stop_lost p.Ter345Glnext*?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03023.1
MATKGSSSSAAASASGDAKIKRVLTHGGKYAHYNVYGNLFEVSSKYVPPIRPIGRGVNGIVCAAVNSETHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMEHENIIGIKDIIRPPKRETFNDVYIVYELMDTDLHHIIHSDQPLGEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLEFLRSDNARRYIRQLPQYRKQKFSARFPNMLPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNINDEPVCPRPFSFDFDQPTCTEEHVKELIWRESVKFNPDPPCQ*


CDS Sequence:
>Vu_03023.1
ATGGCCACAAAAGGGTCAAGCTCTTCTGCTGCTGCTTCAGCTTCTGGGGATGCAAAAATCAAAAGGGTTCTCACACATGGTGGTAAATATGCACATTACAATGTGTACGGAAACTTGTTCGAGGTGTCTTCCAAGTATGTGCCTCCTATTCGCCCAATTGGTAGAGGCGTTAATGGCATCGTCTGTGCTGCTGTTAATTCCGAAACACACGAACAAGTTGCCATCAAGAAGATTGGTAACGCGTTTGACAATATAATTGATGCTAAGAGGACATTGAGAGAAATCAAACTCCTTCGTCACATGGAACATGAAAATATCATTGGCATCAAGGATATCATACGACCCCCCAAAAGGGAGACCTTCAATGATGTGTACATTGTTTACGAGTTGATGGACACTGATCTTCATCACATAATTCATTCTGACCAACCTCTTGGTGAAGAGCATTGCCAGTACTTCTTATACCAGCTGTTACGGGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGACCTTAAGCCCAGTAATTTACTTATGAATGCAAACTGCGACCTTAAAATTGGGGACTTTGGGTTGGCAAGAACAACATCTGAAACCGATTTCATGACAGAGTATGTAGTCACACGATGGTACCGTGCCCCAGAATTGCTCCTTAACTGTTCCGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGGTGCATACTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGCAAAGACTATGTTCACCAATTAAGGCTTATAACAGAGTTATTAGGTTCACCGGATGATGCAAGCCTAGAATTTCTCCGGAGTGATAATGCCAGAAGATACATTAGACAGCTCCCACAGTACCGGAAGCAAAAATTCTCCGCCAGATTCCCTAACATGTTGCCTGAGGCACTGGACCTGTTAGAGAAGATGCTTATATTTGATCCAAACAAACGCATTACAGTTGATGAGGCACTATGTCACCCTTATCTTTCATCACTTCATAACATCAATGATGAGCCAGTCTGTCCTAGGCCATTCAGTTTTGATTTTGATCAGCCAACGTGCACTGAAGAGCACGTGAAGGAGCTCATTTGGAGGGAATCAGTGAAGTTCAATCCAGATCCACCCTGCCAGTAA


Promoter Sequence:
>Vu_03023::LG1:42967832-42969832(+)
CGTACTTATATTGTAATTCTGATAACAAAACCACATTCATTTTTTTAAAATACATAAACAAATTCTTATTCCATTTTAATCCTTTCAAATATATATATATATATATATATATATACATATACATACGTGTGTGTGTATTTTTTTATTTCAATTCTTATAACTATATCACTTTCGTATTTCAATATTTGATGACGTTATAATATATACTTTGCTGTGTTATTATTGCTAAAATGATAATTTTACTAACATATCATGTAATTATATCACACTGTAACATGATAATGACATAGATTATCTATTATAAATTAAAAATATAATTTATATATTTAAACAATTTATTAAAATTTCTAATTATAATATAATTATATATGAAAAATTAGTTATTACATTTTTAATTCTATAAAATAAATTGCTGAAATATTAATTCTTCTGTTAGTCATACTCAAGTTCCTTCTGGAGTGATTCTCTTGTCCAAACATATGGTTTTTTCTTGTTCGCAGCTTATTATATCTTACTTTACGGATCTGATATTCTCTGCAGATTTTCAGAATTTGAAGCTGGTGAATTCAACACAACACCACGATGTAGCTTTATTTTACGCGCATTGGTTTTTCTCAATAAAAATTTAAAATATATGAAGAACATTTATTTGAACAACACAAACATTGCAAGAATTAATTACCATAAATTGCACTTACATCTCATTACATTTAACACAATATACAAGATTAAGAATTTTGCTCTCTAACACCGTCTCCTTTAGTTTCTTATGCAATCATACAAACGGAATGATATGTGAAAAGAGAAACAGTATTGAAGGTAATTACTTCATGTTATTTATACTCCATGTCTCTTCTTCATTAGACTACTACAGGTTCGGATTCTCTCCAGTTTTTGCAGCTATATGTAGTGAATTTTGTAAACTTACACTTGACATGTAAAATTGCAGGATCTAGTTTTTCTGCATTGTACAAAGAATGGCTGAATCTGATGTGTTATGAAGCAAGTCAAACGCTGATCTCCAACAATGCTTTGCTTCAAGTTTTCAACCAAGATAAGTTGCATCATATATACACACGCATTGAAAATTTGAACAGAAAACAGCACTCGAGTCGATCACCATCCAAATCCTTCCACACACCACACCCCAGTAACAATCACCACAGAATAATAGAATTTTGGCATAAAAAAGAACAGATTTCAAACAAAGTTTCTTCAGAGCGATAAACAAGCTCTCTCGGGAAACTTGTGCACACTTTATTTGTGTTGAATTGGCCTAAAGCCACCAAAACAATCAGAGGCTCCGATCGAGCATCACATTTTTTATAACTAGCCTTTTTCATTTCATGTTCAATTAGTCCATTTTTTTCCCTCTTTTGCACACCATAAAGTACAATACGTGTTGTACTTTCAACCACAGCACACGATTCACCATGCAACTTATCACAGGCAATTCGTGAACTCAGAATGAGACGTGATTCTGAGGAGTATACGTACCTAAAAAGGAAACGGGCTAGGTTTCCACTTTCTAGAGTTTTAACGATGCATGAATGCAAGAAAATTAACAAACATCTCGTGATAAATCCTATGCTTTTAGAGATCACGTTACATTTTAGGCTTTTACTTTTACAGGTAGAATGATCAATATCCAAGTGGCAAGCCCATGACCTAGAAAACGCCATTTTCAGATTTCTATTAAAAGCTTTATTACAACTCACTTATCCTACAACTACTTTTTTCCTTTATGATACGTTCTGCAACCACTTTTGGTGTATGTGTCAAAATTATCTTGTAACTTTGGTCTATGAACACACAAGTATCTTATATTTTTTTATACTATTTGGTGGAAGGTAGTTGTATTTACGTACGTTCCCACCATCAACTAATAAACTCAACCAGTGAAAAATGCTATTTTCTGTTTGCTATTGGGTGGCGTAGCTTTTGTAATTTTGATTGAAAAGGTGAACACCCTTTTGCTCTTGGAGTTCGAACATTGAACA


Gene Sequence:
>Vu_03023(+)
ATGGCCACAAAAGGGTCAAGCTCTTCTGCTGCTGCTTCAGCTTCTGGGGATGCAAAAATCAAAAGGGTTCTCACACATGGTGGTAAATATGCACATTACAATGTGTACGGAAACTTGTTCGAGGTGTCTTCCAAGTATGTGCCTCCTATTCGCCCAATTGGTAGAGGCGTTAATGGCATCGTCTGGTAAGTGTTTTATTTCCTGCTTCAAGTTAAATCTGATATTTGCTTCTTAAATATATGCTTGCAAGTAGATTTTATGTTCACTTGAACCATATTTTTTGTTAGTGCTGCTGTTAATTCCGAAACACACGAACAAGTTGCCATCAAGAAGATTGGTAACGCGTTTGACAATATAATTGATGCTAAGAGGACATTGAGAGAAATCAAACTCCTTCGTCACATGGAACATGAAAATGTAAGTGCTCATTTCCTAATTCAGTCATATTCTATTGAACTTTGATCTTTTATTGTCTTAGTTTACATCACTGAAGCTTGTTCTCTCTGTTTGAATACTTATAATTGCTATCATCTTTCACAGATCATTGGCATCAAGGATATCATACGACCCCCCAAAAGGGAGACCTTCAATGATGTGTACATTGTTTACGAGTTGATGGACACTGATCTTCATCACATAATTCATTCTGACCAACCTCTTGGTGAAGAGCATTGCCAGGTTTTGGTCAAATGATATGCTATTGGCTCTTAATTACATTTTGTTTTCAACCACTTGTTATATTTTCTAGCATAGAATTATCTTCTTTTTTTTATGACATATCAATATGCAGTATCTACCTCTGGTTAAAACAATATAGATATAACACTTGTAGGGTTCTACAATTCTCGGTTGTTAGCAGTTGCTTTTTGTTTAGACGTTTGAATTAAGAATAGGCTTTGAGTTTGGACTAAGATCACAAACTATAGACTTAGCGTATGTGGTTTTAGCATTCTTTTAAAGTAATGGATACATATATGCCTTCTTTTCTATCGCAGCATGACACTTATTTGCTGTTAACTCATAACTTTTGCAACTTAGCAGGTCTTATTTTCTGATATAATGTTCCCATTTCAAAAGGACATGGATCGTGTAAATAGGCTTTAATATAGTTTTTCTTTGGATAAATGTTATTACCATGTCGAATTTTTGAGACATTGTTTTGGTACTTCATATTTTTTAAAGGATTCATTTTGGTAGTATGTGTTTTTAAAAAGATTTATTTTGATAATTTTTAGTTAAGATGTTAAACGGGTTAATGCAAGTAACTTTACTTAATTCTTTTGTTAAAAAGAATTAAAATGAATCCATTACAAACAAAAATAAAAAGTTAAGACTTTTAAAATTTAATGTAACAAAATGAAAAAAATATTAAAACCCAAATGAATAAAAGATGTATATATATATATTATTTTGTTTTCTTTGCTATGATCATAAGAAATGACTTACTCATACAAAAACTCCTTTTGATTGAGTTTGAAATTAAGCATGGAATTGATATTGAAAAAAACTTTTGCAGTACTTCTTATACCAGCTGTTACGGGGGCTGAAATATGTGCACTCAGCTAATGTTTTGCACCGTGACCTTAAGCCCAGTAATTTACTTATGAATGCAAACTGCGACCTTAAAATTGGGGACTTTGGGTTGGCAAGAACAACATCTGAAACCGATTTCATGACAGAGTATGTAGTCACACGATGGTACCGTGCCCCAGAATTGCTCCTTAACTGTTCCGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGGTGCATACTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGCAAAGACTATGTTCACCAATTAAGGCTTATAACAGAGGTATGGTTCTCGTTTGGTGCTTCCAATTATGATCATGTCAAGTTCCTCCCTCATGTTATTATCAACCATTACCTATACTTTTTCAATGCTGTTATTATCAACCAACTAGAGAAATGCATAGTTTATATACCTTTGCAAATATATCAGTTTTTGTTATTAGTTGGGTAAATTTATTTATGACCCCTATATAGTTTAAACATTTCGATCTCTTTTGTTACAAAAGCTAAAAGGGTCAAGCATTGTCACATGTTAACACCACATTACAGAAATGCTAACTCAACAATACTGGAAGGAATCAATAAGCATTTTTTGTAACAGAAGTAGGTAAGGACCAAAAGGAGAAGTTTGAACTTTTTAGGATCATCAAAAGAGTTACAGGAATCGAAAGAAAATATTGGTATATTTGTAGCAATAAAAGGGATATTTAAGTGTAACACCATTCGTACATTATGTTTTCCTATTGTACAAAAGTTATTAGGTTCACCGGATGATGCAAGCCTAGAATTTCTCCGGAGTGATAATGCCAGAAGATACATTAGACAGCTCCCACAGTACCGGAAGCAAAAATTCTCCGCCAGATTCCCTAACATGTTGCCTGAGGCACTGGACCTGTTAGAGAAGATGCTTATATTTGATCCAAACAAACGCATTACAGGTATGCATTCTCATAGAATCTGAGTTCCAAGGCAGGTTTATAGTTTTCTTATGGACAGCCTCATTTGTTTCATGTTTGTGAGGTATTTTCATTGTTTGCAGTTGATGAGGCACTATGTCACCCTTATCTTTCATCACTTCATAACATCAATGATGAGCCAGTCTGTCCTAGGCCATTCAGTTTTGATTTTGATCAGCCAACGTGCACTGAAGAGCACGTGAAGGAGCTCATTTGGAGGGAATCAGTGAAGTTCAATCCAGATCCACCCTGCCAGTAA