Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03153 LG1 44313565 44315503 PREDICTED: trihelix transcription factor ASR3-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to molecule of bacterial origin, negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, cellular response to molecule of bacterial origin, cellular response to molecule of bacterial origin, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, cellular response to molecule of bacterial origin, negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of immune response
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA binding, protein homodimerization activity, protein binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/A 44313703 missense_variant p.Asp298Tyr
T/A 44313714 missense_variant p.Glu294Val
C/G 44313715 missense_variant p.Glu294Gln
G/C 44313823 splice_acceptor_variant&intron_variant
G/A 44313827 splice_region_variant&intron_variant
T/C 44313844 downstream_gene_variant
A/T 44313894 downstream_gene_variant
T/A 44314008 downstream_gene_variant
C/G 44314045 downstream_gene_variant
C/T 44314189 downstream_gene_variant
A/T 44314198 downstream_gene_variant
T/A 44314289 downstream_gene_variant
G/A 44314293 downstream_gene_variant
G/T 44314297 downstream_gene_variant
C/T 44314339 downstream_gene_variant
T/C 44314617 downstream_gene_variant
T/C 44314677 downstream_gene_variant
A/C 44314703 downstream_gene_variant
T/C 44314856 synonymous_variant p.Glu216Glu
T/A 44314929 missense_variant p.Glu192Val
T/A 44314964 synonymous_variant p.Ala180Ala
A/G 44314973 synonymous_variant p.Asn177Asn
T/C 44314974 missense_variant p.Asn177Ser
C/G 44315411 missense_variant p.Glu31Asp
T/C 44315471 synonymous_variant p.Glu11Glu
T/C 44315472 missense_variant p.Glu11Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03153.1
MAEESAEKICEGVSESPTTTPVGGQTPLEGESKTRRIKATRHPRWTRQETLVLIESKKMVESGEQGCRFRSASGFIQSDPKWEMVSSFCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESGVKEESESFWIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKVENGFAEVVGPEQCKENEEEEEEEEDEAIVDSEKMSWSTEEENVETSVAANMANGVLKVPPGFKEKEITGSLRNTPLLSLPTQGFQREPVFQHGYKRKRVSSDSSEDNTDFDNSITKLLRRNSEILKAHLGTQNINYELARNQQKQQTDILVAALGKLTDALTKIADKL*


CDS Sequence:
>Vu_03153.1
ATGGCAGAGGAATCAGCAGAAAAAATCTGTGAAGGTGTCTCTGAGTCTCCAACTACTACCCCAGTTGGAGGACAGACACCCCTAGAGGGTGAGTCCAAGACACGAAGAATCAAAGCCACGAGACACCCTCGATGGACCAGACAAGAAACTCTTGTTCTGATAGAGTCTAAGAAAATGGTGGAAAGTGGGGAACAAGGTTGTCGGTTTAGATCAGCTTCGGGGTTCATCCAAAGCGATCCCAAATGGGAGATGGTGTCATCGTTTTGTCAGCAACGTGGGGTGAAGAGAGGGGCGGTTCAGTGCAGGAAAAGGTGGGGCAATCTCCTCACTGATTTCAGGAAGATAAAAAAGTGGGAATCGGGGGTGAAGGAGGAGAGTGAGTCGTTTTGGATCATGAGAAATGATGTGAGGAAGGAGAAGAAGCTTCCGGGTTTCTTTGACTCGGTGGTGTACAATGTGTTGGATGGAGGGGTGTGCACCACTGTTGCATTTCCCTTGACACTGGTGAAGATGGTGCCCAAAGTGGAGAATGGTTTTGCAGAGGTGGTGGGTCCAGAACAATGCAAGGAGAATGAGGAGGAAGAAGAGGAGGAGGAGGATGAGGCCATCGTCGATAGTGAGAAAATGAGTTGGAGCACCGAAGAAGAAAATGTGGAGACCAGCGTAGCTGCAAATATGGCCAATGGTGTTTTGAAAGTGCCACCAGGTTTCAAGGAGAAAGAGATCACTGGGAGTCTCAGAAACACCCCCTTACTCTCACTGCCTACTCAAGGCTTTCAGAGGGAACCTGTATTTCAGCATGGATACAAGAGAAAGCGGGTATCATCGGACAGTAGTGAGGACAACACAGATTTCGACAACAGTATTACCAAATTGCTTAGGAGAAACAGTGAGATACTGAAAGCCCATCTTGGAACTCAGAACATAAATTATGAATTGGCCAGGAACCAGCAGAAGCAGCAAACTGACATCTTAGTTGCAGCCCTTGGCAAGCTCACCGATGCTCTCACAAAGATTGCTGACAAGCTGTAA


Promoter Sequence:
>Vu_03153::LG1:44315503-44317503(-)
CATGTAAATATCACAAACAATAAAAAAATTGTAAGAAGAAAATTAAAAGTAAATGTAATTTAGATTAAGGAATAAAAACAAATAAATTTCTGAAAATAAAAAAACTAAATAAATTATTTCAATAAAATAATTTGTCCGACGCAGAAAACATATACAAGTTTTAAAAATAAATTTAAACATTAAAAAATAAAAATAAATATTTAAAAAATATAAAATTATAGTCAAATAATAATATATTTTATTTATAAATGAAATTTTTATTATATATAACAAAACCTATATAACTACATTCTTTTATGTGATTTTACAAAATTGTTTTTACAAAAATCAAATAGAGTATTTTATTGATTAACTGTTAACTTATAATTATAAACTAATTTATCAATTAAAATCCAACTTAACTTATTATTTATCAAGTTTATAAACTGTTTCTTTTCTTCAAACACAATTATCATCTATCATTAAAATTGGTTTGCATCTTAGTTCAAGATTCTACTATTACTATTCTGATTAATAAAAAAATTATTTGTTGGCAAAATTAGAGATTCTCAGCTCCAAAAATTGAAACAACCAATCTAATTCAAATAGCAATAAAATCTGATTAGATTGTTCAGTAGTCAGTCTTTACACTAGTAATAAATTAAAATTACTATAATAGTTTTTATAAAACACAATAAAGACCAACTTTAAATACGTACTATTTTTTTCTTACTTAAGATAAATCTAAATTGAACTGTGAATTTTTACTACTATCGGATATATATATATATATATATATATATATATATATATATATATATATATATAAATTTCAAAATCCTTTCGAAATCAAGCATCTTACTTGAAGGAAATGACATCTTCAAGAGGGGCAGTTGACTATTTTTAAGTACATTTTGGTTATAAATGTGAGAAATTATTTTAAGGGTGTGTTTGGATTCACGTATGAATTTGAGCCAGTAGAAATAGGTAAGTTTGATTAAAAAAAAAGAATATTGACGAGAAATAAAGAAAAAAAATAATTATGAATAATTTGATAAGTTAATAAATAATTTATTTCTTAATAAAATTAATTAATTAAGTATGTTCTTAAAATTAATTTCTATTAATACATTGTAAGTATATATTATATTAGAATAAGGAATGAATATTTTGTTTTACTATTTACTTTTGCATCTTTTAATAAAAATTTATCCCAACTATCTATTGCTTTAATTTTATTTTATTAAAAAGACCCTTAATCATTTTAGTCCATAAATAATAAATACGGACAATTATATATTTCTCTCTCTTATAAAGATTGGAGAGAATGAATAATCCACCATGCTATTCTCCCTCTATAATTAATTATTTTACTGATAAATTTATTACTATTAATTATCATCTTTAATGTATATGAATCTGTTCATTTATGCCTTCTGAGAAGGACAATGGAAATATATGTCAAGAAAAGATACACATACATTATCAAGAACATGAGTATTAAGTAAACAGGGAGGATTAGAATCACAAGAGTTAAAGTACATTATTCTATTAATTAAGATCTATTAACAATTATAAAATAAAATTAATCAACTAGGAGATTAAACTTTATAATTTTCAAGAAATTTTGATTAATAAGGAACAAGGGTGGCTTCATTAGAAAAGAGGGGTCTTGTCTTCTAATTTCTTAAATTTTAATATATTTTATATATTTGAAATTCTAATTTTTTTATATATTTATTTAAAAACTTTAACATCCTTTTACAATATTATCGAATTTCAAACTATAATTTTTTAAATTTTCTAAATAAAATACAGAAGAAAAATTGCAGGTATTAGGAGTAAATTAATTATTTTTTTAATGTGAGAAAATAATCTGACGTGGAAAGAAGTCTCGTAAGCGAAAATATCGTACCTCTTTGGAAGTTCATTGAGTAGCATAAAAGCACGTCTTTATTATATGTATCACCCTGTTCTTATCTTAATCCTCGGAGTCTTTCACTGAAACAAAGGGTGTGATC


Gene Sequence:
>Vu_03153(-)
ATGGCAGAGGAATCAGCAGAAAAAATCTGTGAAGGTGTCTCTGAGTCTCCAACTACTACCCCAGTTGGAGGACAGACACCCCTAGAGGGTGAGTCCAAGACACGAAGAATCAAAGCCACGAGACACCCTCGATGGACCAGACAAGAAACTCTTGTTCTGATAGAGTCTAAGAAAATGGTGGAAAGTGGGGAACAAGGTTGTCGGTTTAGATCAGCTTCGGGGTTCATCCAAAGCGATCCCAAATGGGAGATGGTGTCATCGTTTTGTCAGCAACGTGGGGTGAAGAGAGGGGCGGTTCAGTGCAGGAAAAGGTGGGGCAATCTCCTCACTGATTTCAGGAAGATAAAAAAGTGGGAATCGGGGGTGAAGGAGGAGAGTGAGTCGTTTTGGATCATGAGAAATGATGTGAGGAAGGAGAAGAAGCTTCCGGGTTTCTTTGACTCGGTGGTGTACAATGTGTTGGATGGAGGGGTGTGCACCACTGTTGCATTTCCCTTGACACTGGTGAAGATGGTGCCCAAAGTGGAGAATGGTTTTGCAGAGGTGGTGGGTCCAGAACAATGCAAGGAGAATGAGGAGGAAGAAGAGGAGGAGGAGGATGAGGCCATCGTCGATAGTGAGAAAATGAGTTGGAGCACCGAAGAAGAAAATGTGGAGACCAGCGTAGCTGCAAATATGGCCAATGGTGTTTTGAAAGTGCCACCAGGTTTCAAGGAGAAAGAGATCACTGGGAGTCTCAGAAACACCCCCTTACTCTCACTGCCTACTCAAGGTACCAAGTTACACGATTACACTGTCGTTTTTGTTTCTGAATTTGAAGAGAGTTACAACATATGTTCCTTTTTATGTTGTTTTATGCTCAAAATATTGACCATTTTAGTTTGCAATGGTTAATCTCTCGTGTACCCTTTTCGTATTGATTAATTATTTTCTCGTTGCTTTCAACTAATAAGCAGAGAAGCAGCAGCAGCAGCCGCCATCTTGCCAAGGGAACTATGATCCTTGTAATCAAACCAATTTACTTCTGCTGTGTAGTATATGTTTGTCACTTTTGTTCAGTTCGACTGTGATGCAATGTTAGGGTTTATATATAGTAGAGTTTGGTCCCCATTTTTTAATGTAGCCCCTTTTGTTTCTCCTTTTTCAAAGAACTTTTTTGTCCCTGAAACACTGTTTATATGCAACTGTTGCTGTCAATTGAATCAACAAACAATAATTCCTAACTACCACTACTAGTATTTCATTTGGCAATGCATTGCACCATATACTGTAAATTTGTTGTTAAAGATCAATTAATAATTTCATTATGAAATTGTTATTTCGAACGAAGTTATTCTCGCACAAATAACATAAATCAGCGTCTTTTGAAATATCATTTTAAACAGAGACTGCATTGTACTGAGATATGGAGGAATAACTTGTATTTAGCATGAATTTGTTAACAATTGGAAACTATCAGCTGCACGTGAAAATGTTGCTGTAGTCATTGAAATAAATTTTTTTTCGCGTATTTTTCACACATTCATTTGGTCAGCCAATCGAAATCATTCTGTGTTGATCACTCATTTTATCTGGACGATGGTGATTGATTGAATGATGAAAGTCCAACTACACTGAATTTTGTTCCAGAGTTAATGAGCTTTGCTTTTTGCAATCTGAACGAAAGTATTTTGGTTCAGGCTTTCAGAGGGAACCTGTATTTCAGCATGGATACAAGAGAAAGCGGGTATCATCGGACAGTAGTGAGGACAACACAGATTTCGACAACAGTATTACCAAATTGCTTAGGAGAAACAGTGAGATACTGAAAGCCCATCTTGGAACTCAGAACATAAATTATGAATTGGCCAGGAACCAGCAGAAGCAGCAAACTGACATCTTAGTTGCAGCCCTTGGCAAGCTCACCGATGCTCTCACAAAGATTGCTGACAAGCTGTAA