Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03189 LG1 44720783 44724018 hypothetical protein TSUD_70910
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to osmotic stress, intracellular signal transduction, lateral root development, response to osmotic stress, response to salt stress, protein phosphorylation, response to osmotic stress, response to salt stress, protein phosphorylation, protein phosphorylation, lateral root development, response to osmotic stress, lateral root development, protein phosphorylation, protein phosphorylation, response to osmotic stress, protein phosphorylation, response to osmotic stress
Cellular Component   located in   cytosol, plasma membrane, nucleus, plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, phosphatidic acid binding, protein kinase activity, kinase activity, protein serine/threonine kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein kinase activity, phosphatidic acid binding
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
C/A 44720858 intron_variant
A/T 44720859 intron_variant
C/A 44721089 intron_variant
A/T 44721165 intron_variant
G/A 44721182 intron_variant
T/A 44721229 intron_variant
A/G 44721238 intron_variant
C/A 44721331 intron_variant
G/A 44721397 intron_variant
A/T 44721440 intron_variant
A/C 44721509 intron_variant
G/C 44721574 intron_variant
A/G 44721695 intron_variant
G/A 44721715 intron_variant
A/T 44721841 intron_variant
C/G 44721848 intron_variant
C/T 44722033 intron_variant
T/C 44722450 intron_variant
G/T 44722451 intron_variant
T/G 44722601 intron_variant
C/T 44722661 missense_variant p.Ser138Leu
G/A 44722781 intron_variant
T/C 44722803 intron_variant
C/T 44722824 intron_variant
C/T 44722837 splice_region_variant&intron_variant
G/T 44722913 missense_variant p.Arg192Leu
T/C 44722974 intron_variant
C/A,T 44723019 intron_variant
C/T 44723059 intron_variant
C/T 44723105 intron_variant
C/T 44723138 intron_variant
G/A 44723194 intron_variant
C/G 44723203 intron_variant
C/T 44723224 splice_region_variant&intron_variant
C/T 44723273 synonymous_variant p.Cys214Cys
G/T 44723302 intron_variant
G/C 44723311 intron_variant
T/A 44723333 intron_variant
C/T 44723344 intron_variant
T/C 44723353 intron_variant
C/T 44723372 intron_variant
C/T 44723416 intron_variant
C/T 44723417 intron_variant
G/A 44723418 intron_variant
G/A 44723434 intron_variant
T/A 44723446 intron_variant
C/A 44723523 intron_variant
G/T 44723537 intron_variant
A/T 44723654 stop_gained p.Lys225*
T/C 44723661 missense_variant p.Ile227Thr
C/T 44723672 synonymous_variant p.Leu231Leu
A/G 44723693 missense_variant p.Ile238Val
A/T 44723721 missense_variant p.Lys247Ile
C/T 44723816 synonymous_variant p.Leu279Leu
G/A 44723818 synonymous_variant p.Leu279Leu
C/T 44723821 synonymous_variant p.Phe280Phe
G/T 44723848 missense_variant p.Leu289Phe
T/A 44723868 missense_variant p.Leu296His
C/T 44723873 missense_variant p.Arg298Trp
G/A 44723874 missense_variant p.Arg298Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03189.1
MAASLVELRDLIMEKYEAVKDLGAGNFGVARLMRNKETKELVAMKYIERGQKARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCRHLLSRIFVANPLRLELELGILFSPLHCFPYVMLRSQYEVYIKLTATPDSLYCLQRISLKEIKNHPWFLKNLPRELTESAQAVYYQRGNPSFSVQSVEEIMKIVGEARDPPPVSRPLKGFGWDGEEEEGEEDVEEEEDEEDEYDKRVKEVHASGEFQIS*


CDS Sequence:
>Vu_03189.1
ATGGCAGCATCTTTGGTTGAGTTGAGGGATTTGATTATGGAAAAGTATGAGGCTGTCAAGGATTTGGGGGCTGGGAATTTTGGGGTGGCCAGGCTCATGAGGAACAAGGAGACCAAGGAGCTTGTTGCCATGAAATACATCGAGCGTGGTCAAAAGGCTAGATATTTCTTTCAGCAGCTTATTTCTGGTGTGCACTACTGTCATGCCATGCAAATTTGCCACAGAGATTTGAAGTTAGAAAACACACTTTTAGATGGTAGCCCTGCACCCCGCTTGAAAATTTGTGACTTTGGCTATTCCAAGTCATCTCTGCTTCATTCACGACCCAAATCAACTGTTGGAACTCCAGCTTATATAGCACCAGAGGTTCTTTCCAGGAGGGAGTATGATGGGAAGTTGGCTGATGTATGGTCATGTGGAGTGACTCTTTATGTGATGCTGGTTGGAGCTTACCCTTTTGAGGATCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGCGAATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGACTGCAGACACCTCCTTTCTCGTATATTTGTAGCAAATCCATTAAGGCTAGAACTTGAATTGGGTATTCTTTTCTCTCCTCTGCACTGCTTTCCATACGTCATGCTTAGGAGTCAGTATGAAGTTTATATCAAGCTAACTGCCACACCTGATTCTCTCTATTGTCTGCAGAGAATCTCCCTTAAGGAAATTAAGAACCACCCATGGTTTTTGAAGAATCTTCCAAGAGAGCTAACTGAATCAGCTCAAGCTGTCTATTACCAGAGAGGCAACCCAAGTTTTTCTGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAAGCAAGGGACCCTCCTCCGGTTTCTAGGCCTCTCAAAGGTTTTGGCTGGGACGGTGAAGAAGAGGAAGGGGAAGAAGATGTGGAGGAAGAGGAGGATGAAGAAGATGAATATGACAAGAGGGTGAAGGAAGTTCATGCCAGTGGAGAATTTCAAATCAGTTAA


Promoter Sequence:
>Vu_03189::LG1:44718783-44720783(+)
TAAATTAGTTTATCCTTGTCTTTATTTGTCTGTTTGTTTGTTTTCTTGCTATGATCACAATATAAAATGATATTTATTTTACTTTTAATAAGATATTTATTGGTTGATAACTATTTTGAATTATAATGAGAATAAAACTTTACATAAACATTGAAATATTATCTATATAATAAGTTTAGATATAAATATTAAAGAAACTAAAAAAAAATACAAACTTATAATTTAAAATATGCAAGTTATCTAATATTAAAACTTAATCCAATAATTAATTATATTATTATGTGTTATGTTATAACTTTCAACTATTTTGTTTAACTAGTTTTATCAAACATTTTAAACTTACTTTCTCATCAACTCTTAGTTAATTTTTCAGTTACAACTGAGCTTTTCAACTAATTTTATAAATATAGTCCAAAAGTAAGAATAAAACTGTCCAATTTTCATATTTCATTTAAGATTATAACACTTAAATCATAACATTTTTTTTTTAATTTTCATGTCTTATTTATTATGTTAATATTTTAATATAATTTTTTGTTATTTTCAATAAGAGTAAATACAATGGTATTAACAAGTTTTTATGCATAGCATGCATATTTTTCAGAGTAGGTATAATATAAATCAAATAAAACGATATATAATTTTTTTATTATTCAGGGTGAAGTTACATATTTTATAAAGAAGAACTTGCATATTTACCAGTACATATTTTAAAACGATAATATGATTATTTTCCATAATAAATATTGTCTTTAATTACATATGAATAGATAAAAGAGATACGTTTTGAAATTAAAATTATAGTCTAAGATTGCAAAAATTTCAAATTGATTTTACCTTAAAAATTTATTACTAAATTTAAATTGAGATTGGCAACAGTGTTTGAGAAAAAAAAATACAAAAAACAAGATATTTAATATCTGAAAGTTTCCTAATAGCACTTTTATTCAATATTAAGTCATTGATTTTATCATAAATAATCACAATACCAGTGTATTTGTTTTTGAGTTATGTTATGATTGGATGCTTGTTAACATGACATAATAAGTTTTTTGGTAGAAATATTTTATTTTTTTAGAAAATAAAATGAAGATGTATGGTAATTTTGTGGATGTGAGAATTTCTCTCAACGTTTAAAGGATAACATTTGTTATATTATTTATTAATGAGTAAAACAATATATTAAATGAATACATTAATTATATATTATTATGTATTAAAAGGTAATTAAGAATTTCATTTTAAACATTTGAAATTATAAATAATTAAGAATTATAATTTCTTAAGTGTTAAGCACCTTCCGAAAACAATATTTCATAGCAAACTAAAACATAACAACAGTTATGTCATTATTGTACATTTTAAAAAGTATAACATTATAAAAAATAATAGAAGATAACATAACGTATATATACGTGGGGTTGCATACAATACTACGTATTTGCTTGATTAATTAATAATTAAAGGGTGGAGTGGTTCTTGGGCGAGTGAAAGAAAAAGAAAGAGAGAAAGAAAGAAACTGTTAAATTAAAAAAAAAAAAAAAAAAGAGAAGGTAGCTTGTGAAAACGACAAAGAAGATTGAGGAATGAAGAGAAAGGAGTCCCTGTCCTGTCCCCTACAGCATCGGCGTTGTAAGAGATCCCATTCCAAATACCAATTCCAAATTTGCAATCTCAATTCTCAGTTTCACAACTCAAATAAAAAACCAAACCAAAAGGGTACTCACTAATTAACTGGATTCAAGCTGGTTTGCCTTCATCTTCTTCATCTTCATTGATTAGATCCCATCCTACCCCAATTTTCTAATGTTTTCTCTCTCACTATCCCACGTGCACTTTCTTCTCTCCCGCTCTAAATAATTTTTCATTCCCACCCCCCAATCTCTCTCTCTCTATACATATATTACACATTATTGTATGTGTGTGTGGAAAAAGAACCGTTTTTTTTTTATCAGTGAAAGGGACCACCTTTATATAACCCTTTTGATCAAAGTGTAAAA


Gene Sequence:
>Vu_03189(+)
ATGGTGTTGTGATTCTACAAGGGTCTTGCATGCCCCCTCTGAGTTTCAAGTTTCAAGTTTGAACCCCCTTTCTTCCATTCGTAATCGTAATAACAGGCAGCATCTTTGGTTGAGTTGAGGGATTTGATTATGGAAAAGTATGAGGCTGTCAAGGATTTGGGGGCTGGGAATTTTGGGGTGGCCAGGCTCATGAGGAACAAGGAGACCAAGGAGCTTGTTGCCATGAAATACATCGAGCGTGGTCAAAAGGTTTCTTTTTTCTTTCTTTCTTTCTTTCTTTTAAAAAAAAGTATAATCGAATTTTATCTTTTATTTTTTCATTTCTTCAATCTTCAGATTTGTTATTGCTTGCACGTTTTGCATGTGAAATGATGATTAATGAAGGGCATGTGAGGTTGAGGCTCTGATTTGTGAAAAGTGAAAAATCTGGGAAAGGTGTTACATGGTTTTTTGTCACAATTTCATTACGCGTGATCGAAAGAAATGTAGGAAGTGATGGAAAATACAATTATAAACTATCTTGTTTTTAAATGTGTAGTAGCTCTTTCCTGGAGATAGTTGATTCTGTTTACTGATTATTATGAACTGATTTTCTTTCACTAAATCTTTGAGTTGGCTAATCCAACGCATGGCTTGTATTCTGCTGTAAAACCAAGCAGACTAGATGGAGATGTTCATATTCTTTTATTTGTTTCTTGTTTTTAATTTCTATTTATGAAATTGAAAAGCTATTGTTTTGGCTTCTAAAAGTTTTATTCACCCCTTCTGCAATTCCAGATTGACGAGAATGTGGCAAGAGAGATTATCAACCACAGATCCCTTCGGCACCCCAATATCATTCGCTTCAAGGAGGCAAGGATTTAAGCTGTTGGCATATTGGATTATTTGGTATTGAGTACTTTATTTTATTAAATTATTTACTCATTTAAATCGTATTTTGGTTTTGTAGGTGGTTTTGACGCCCACTCATTTGGCCATAGTGATGGAGTATGCAGCTGGAGGAGAGCTCTTTGAGAGGATATGCAATGCTGGCAGGTTCAGTGAAGATGAGGTTGATAACTTCCTCGTGGGATTTTCTTCACACCCTTAGTACCTTTTCTTGTATCCATGTCTCATTTATTTTCCCCTTTGATTGTGCAGGCTAGATATTTCTTTCAGCAGCTTATTTCTGGTGTGCACTACTGTCATGCCATGGTATAATAATTCTAAAGTTCTTGAAAAATGATTGAACTTCTCCTCTCAGAATTGTACAAAGTGAGAACCTATGATTTTACTCCTTTTTTTGCAGCAAATTTGCCACAGAGATTTGAAGTTAGAAAACACACTTTTAGATGGTAGCCCTGCACCCCGCTTGAAAATTTGTGACTTTGGCTATTCCAAGGTACCACAATGATTAGATTAACACTAGTTTCAAAGTTGTAATAATATGCACCTTAGCCTCATATGTCTGAACGTTTCTGATTTTTGGTTTAGTCATCTCTGCTTCATTCACGACCCAAATCAACTGTTGGAACTCCAGCTTATATAGCACCAGAGGTTCTTTCCAGGAGGGAGTATGATGGGAAGGTATGTACTCTACAGTCTACATATATTTGGTTCTTTATAGTTCCCTATATCTTTGTATGTGTGGCTGTGTTTTAGGATGTTAACATCATCTTTCTGTCTGCTGCATGTCAGTCTTTGGGTTTATTTGAATAGGGAGAGGGGAGATTTCTTTTCATTTCTTGTTACACCTTGCCTATCTCTAATTTTGTAGCTTTGTTTCTTTGACCATGCTACCTGGAAAAGTCTTTATATGTATATCTACTATAACCAATATATCAATGAATCTAATTAATGTTCTATTCTAAAAATTGTTTTAGTTGGCTGATGTATGGTCATGTGGAGTGACTCTTTATGTGATGCTGGTTGGAGCTTACCCTTTTGAGGATCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGGTACAGTACTATCACTGTTAATACTGATTCTGATACTCTTTCATGCTATATTCTCATTATCTTACCCATATTTCCCGTTCTCATCTGCAGCGAATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAAGACTGCAGACACCTCCTTTCTCGTATATTTGTAGCAAATCCATTAAGGGTATGTTATAATTTTCAAGTAACTCTTGTTTCCTTTTTACATTTCAATTTGGACAAACTATCTTAACCGTATTATAATCCCGAGTTACAATTATGTTATTCTGTTGACTTGTAACCCTTGCGAATCATAATGTTGATGAGAAATAATCAAGCTGGTGAAATAAACCCTGTTGACTGAAAGCTATACCTATTGGGAAGTTCTACACCCAACCCCTATTCTTTAATAATCATCTGCTACCCTCTTGTTTAGTTGATTGGTAAAGATCAAAATTTTCCATTTTCCCTCCTGTTAAGCTAGAACTTGAATTGGGTATTCTTTTCTCTCCTCTGCACTGCTTTCCATACGTCATGCTTAGGTTTGTCAGAGATCCGGGACAATGCAAAATTTAGACTTGTACAATTTGAACAGAAATCTTATCATATTTTATGAAGAACTAATGGTATTTTCTTTTCAAAATTTTGGTGGCATGTACTGACTCCGGAGAATGAATTTGCTGGCTAATGGTTGTAAAAGTTTAACATACACTCAGTCCTTATTAATTAAATTACTTGTGTGGCTTTAAATCTATATAGAGCTCCCTATTTCTGATTCACCTATGGTATCTTCACTTCATTCACCAGTTTTGATATGCTTTTAACAGAAGACAACATTTTAAACACAAACTTTGTGCTTTTGAAAGTACACATGACTGAATTTGATATCAGGAGTCAGTATGAAGTTTATATCAAGCTAACTGCCACACCTGATTCTCTCTATTGTCTGCAGAGAATCTCCCTTAAGGAAATTAAGAACCACCCATGGTTTTTGAAGAATCTTCCAAGAGAGCTAACTGAATCAGCTCAAGCTGTCTATTACCAGAGAGGCAACCCAAGTTTTTCTGTTCAAAGTGTGGAGGAGATAATGAAAATTGTGGGAGAAGCAAGGGACCCTCCTCCGGTTTCTAGGCCTCTCAAAGGTTTTGGCTGGGACGGTGAAGAAGAGGAAGGGGAAGAAGATGTGGAGGAAGAGGAGGATGAAGAAGATGAATATGACAAGAGGGTGAAGGAAGTTCATGCCAGTGGAGAATTTCAAATCAGTTAA