Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03203 LG1 44879234 44883744 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710 isoform X2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, response to inorganic substance, glucosinolate metabolic process, tissue development, signal transduction, secondary metabolic process, protein phosphorylation, protein phosphorylation, glucosinolate metabolic process, glucosinolate metabolic process
Cellular Component   located in   chloroplast, chloroplast
Molecular Function   enables   protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein kinase activity, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein kinase activity, protein binding
SNP Position Effect Amino acid change
G/C 44879258 missense_variant p.Val9Leu
T/C 44879320 synonymous_variant p.Ala29Ala
C/G 44879347 splice_region_variant&intron_variant
T/A 44879377 downstream_gene_variant
C/T 44879381 downstream_gene_variant
A/T 44879621 downstream_gene_variant
T/G 44879641 downstream_gene_variant
C/T 44879811 downstream_gene_variant
A/T 44880111 downstream_gene_variant
G/C 44880276 downstream_gene_variant
A/G 44880421 downstream_gene_variant
G/T 44880637 synonymous_variant p.Gly143Gly
T/A 44880727 intron_variant
T/C 44880845 intron_variant
A/G 44880966 intron_variant
A/C 44881049 splice_region_variant&intron_variant
T/C 44881177 intron_variant
C/G 44881184 intron_variant
A/C 44881207 intron_variant
T/A 44881208 intron_variant
C/T 44881568 missense_variant p.Arg239Cys
C/G 44881736 intron_variant
A/G 44881839 intron_variant
T/G 44881952 intron_variant
T/C 44881956 intron_variant
T/C 44882158 intron_variant
T/A 44882163 intron_variant
A/G 44882183 intron_variant
T/C 44882201 intron_variant
G/C 44882366 splice_region_variant&intron_variant
T/A 44882397 missense_variant p.Trp254Arg
G/A 44882433 missense_variant p.Ala266Thr
T/A 44882465 stop_gained p.Tyr276*
C/G 44882473 stop_gained p.Ser279*
C/G 44882508 missense_variant p.Leu291Val
A/T 44882818 intron_variant
G/C 44882944 intron_variant
G/A 44882945 intron_variant
G/A 44882980 intron_variant
G/A 44883100 intron_variant
C/T 44883415 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03203.1
MFRRNLSRVPLKILTRWLIFLTILKVSSAIKDPDVEGEALLDLLHFLNDSNKQITDWDSHMVSPCFSWSHVTCRNGHVISLALASVGFVGTLSPSITKLKYLVSVELQNNNLSGPLPDYISYLKDLQYLNLADNNFNGSIPDKWDELSNLKYLDLSSNGLTGRIPMQLFSVPMFNFSDTHLQCGPGFQQTCTSKSENPDSTHKSKLAKIVRYASCGAFALLCLGAILTYRHHQMRRNKRDVFVDVSGEDESKISLGQLRRFSWRELQLATKNFSEGNIIGQGGFGKVYKGVLCDNTKVAVKRLVDYHNPGGEAAFEREVQLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRGKSSEKTDVFGYGITLLELVTGERAIDLSRLEEDEDVLLIDYVKKLLREKRLEDMVDRNLERYDPKEVETILQVALLCTQGYPEDRPSMSEVVKMLQGVGLADRWADWQQLEEARNQEFSLMTHQFVWNDESTLDQEAIQLSRAR*


CDS Sequence:
>Vu_03203.1
ATGTTTCGCCGAAATCTTAGCAGGGTTCCTCTCAAAATATTGACGAGGTGGCTCATATTCCTTACTATCTTGAAAGTCAGTTCAGCTATCAAAGATCCTGATGTAGAAGGTGAAGCTCTGCTTGATCTTTTACATTTCCTCAATGATTCCAATAAGCAAATAACGGACTGGGACAGCCATATGGTTAGCCCGTGTTTCAGTTGGTCTCATGTCACTTGTAGAAACGGACATGTCATATCACTGGCCCTGGCTTCGGTTGGATTTGTTGGAACACTGTCTCCCTCAATTACCAAGTTGAAATATTTGGTTAGCGTGGAATTGCAGAACAACAATCTTTCAGGACCCTTGCCCGATTACATTTCCTACTTGAAAGACCTACAATATCTAAATCTTGCTGACAATAATTTTAATGGTTCTATACCAGATAAATGGGATGAACTATCCAATCTAAAGTATCTGGATCTTTCGTCTAATGGTCTTACTGGAAGGATCCCAATGCAACTCTTTTCAGTTCCAATGTTTAACTTTTCAGACACGCACCTTCAGTGTGGTCCTGGCTTCCAGCAGACTTGCACTTCTAAATCTGAAAATCCAGATTCAACCCACAAATCAAAACTGGCAAAAATTGTACGTTATGCAAGTTGTGGTGCCTTTGCACTTCTGTGTCTTGGGGCTATCCTTACATATCGACACCATCAAATGCGTAGGAACAAAAGGGACGTCTTTGTTGATGTTTCAGGTGAAGACGAGAGCAAAATCTCCCTTGGGCAATTGAGAAGATTTTCTTGGCGTGAACTACAGCTTGCCACCAAAAATTTCAGTGAAGGCAATATAATTGGTCAGGGTGGTTTTGGAAAAGTGTACAAAGGAGTACTCTGTGATAACACCAAAGTAGCTGTGAAGCGCCTCGTTGATTATCACAACCCTGGTGGAGAGGCTGCATTCGAGAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAGAAACCTCTTAAGACTGATTGGCTTCTGCACAACCTCAACTGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTCAGTGTAGCTTATCGACTGAGAGGAAAATCTTCAGAGAAGACTGATGTATTTGGATATGGCATAACACTTCTTGAACTAGTCACCGGTGAGCGTGCAATAGACCTCTCTCGGCTTGAAGAGGACGAGGATGTTCTTCTCATCGATTATGTGAAAAAGCTGCTGAGAGAAAAAAGGTTGGAGGACATGGTGGATAGAAATTTGGAGAGGTATGATCCAAAGGAAGTTGAGACCATTCTTCAGGTTGCATTGCTTTGCACCCAAGGGTACCCTGAGGATCGTCCAAGCATGTCAGAGGTGGTAAAAATGCTGCAGGGAGTGGGATTGGCAGATAGATGGGCTGACTGGCAGCAACTTGAAGAGGCCAGGAATCAAGAATTCTCACTCATGACTCACCAATTTGTTTGGAATGATGAATCTACACTTGATCAAGAAGCCATACAGCTTTCCAGAGCAAGATAA


Promoter Sequence:
>Vu_03203::LG1:44877234-44879234(+)
AATAGTATATAATTTCCTAAAAAAGAAAGTGAACACGTGAGCATTTGGATTTTTGAATGAAAACAAGTACAACTATAGATAATGTATCTTCTCAGTTTCTTTCCTTTCGTTGTTCATTGTCCTCCAAAAATCCAACACCTTCCCCAAACCTTCATTTCTTCCACTCCCAACACTAACACCATCTATCATTCTGCCTACAAAAGTTGACTGCCACGTCAACCACCACTTTCCACATCACACGTGTCACAATTCCACTTCACCACAGTCTTAGGTAAATGCCACAAAAAGTTACAATGACTCTAATTTTAGCAATTTTTTAGATGCTGCTGTCAAGAAAACTAAACTCAACCAAAACGTAAAAAATTGAAGTTATGAAAATTGTTGAGCATGTAATATAGTAAGTGAAAATTGGTGGAAACTATGCAGACATAGGAGTTATCTGATAATGTATATCGTGGTGCACAGGTGAAGGCACAATTATCCAGAATTCCTTATCCTTCTTGGAACTTTATGATGAGTCTTGGTCTTGCTCCACGAGGGTCCACGAATTTTGGTTAATTATTAATGGTAATGGGAGCTTTTAGAAATGTAAAGTGGTTCTTTAACTTTAAAAAAAATGAAGAGGCACTGTCATGGAACAGGAGAATAATATATAATGAAATGATTTTAGTGGAAGGTTCATTGGTGCCGCAACACAGCCGGGCATAAATAAAGATGGGAATGAGATATATGCGTTGGAGTTGGAGCATTTTTTTCTGGTCAAATTGTGTTAAAAGAGATATAAAGGGGTGAAGAAGAAGGTGATTATTATCAACAAAGTGAAAATCCTTGTTTAGTGGGATTCTCATTCTCTTCCCACCACTCACTCACTCACTCACTCGTTCACACTAACCAAATGCCTCTCATATTCTCTCCTATTTTCCCTCCTTCTGCATTTCTTTATTATTATTGTTCCAACCATTTTCATTCTTTTGCTTCATGTCTTTACTGTTTTTTTATGAAGAAAAAGGACTTCTCGTTGTTTCCCTTCTCAGTCCCATTGCTCGTTGCCACGTGGGTCCCTTGCACTCAACCCACATGATTGTGACACTCATCATAGTGACACACAACGATAAAGTTTCCTTCTTCAACTGCCCCTCCTTTCAATGTTCATGGTGTGTGCAGATAGCTAGCAAGCTAAACCAGTATGCTTCTTTTTCTCTTCATTTTGTCCCTTTACCATTCATACAAATACTAGTTTGATACCTATCTTCTTTTTACATACACATTAGACAGAGATTTCTAAAGATAGATTTTATGTGAAAATATGTGTATTGCAATCATTGGCTCTGAAAACTCAGACTAATAATCTAGGTGCATGCTTATTTTGTTCTCTACTTATGTTTCATCTTTTTTTTTTCCTCTGGCTTACTCAATCTAATTTTTTACTCTGATAAGTTCAGTATTTAGAGTACTTTCAACCGTCTCCCTCTGTCTAACGGCTATGATTAGGAACTCACCCCGTTTTCCAAGCTGTTATGCAGTTCTATGTTGGTTTTTTATGCTGCTATGTTGTTCTGTGTTGCTTTCTTAAGCTGCTATGTTGTTCTATGTTGGTTTCTTAAGCTGTTATGTTCTTTGTTTGTTTCTTAAGCTTTTATGCTGTTTTATGTCGATTTCTTAAGCTTTTACGTTCTTCTACGTTGGTTTCTTAAGCTTTTATGTTCTTCTACGCTGGTTTCTTTGGCTTTTATGTTGTGTGCTGGTTTTATATCTGGCATTCATTTTGAAAGCAAGTAGTTGCTGTTGTAAACTTTATATCCTGCTCGCTTTAGTGTTACTATTTGGAGTAAAACGTGCATATGATTCTGGGCATGACATGTTTTTTTTTTTGCATAGTTTTATAGTTATTTATTTTAGAATGTTGTTTAATTGTTTTTGTTGGTGAATTTTTCCCTGTGGAAACTTCTGAAAAGGGACTTGACCAGGTGAGTTTTCCTTGGAGATCAAAGAAGTTTATA


Gene Sequence:
>Vu_03203(+)
ATGTTTCGCCGAAATCTTAGCAGGGTTCCTCTCAAAATATTGACGAGGTGGCTCATATTCCTTACTATCTTGAAAGTCAGTTCAGCTATCAAAGATCCTGATGTAGAAGGTGTCGTAAAATTTACTGTTCACCTGTTTCTTTGTCTTCATTCTACGATTTAGTTATTATACTTGAAAATTTGAAGTTTTAGGTTCCTCTACATGTATGCTAGCTAAGTTTTGATTCCTAGAGTTCATAGTAGAGAAGAACTTTTGGCTGTATTAAACAGTTACAATAACTTTTAGATAGTCACAAACCACTGCAAAAAACTCTGTAGATGTAAAACTAACCAATTTTTTGTTATATAAACTAAAACTAAAGATAAAAGCAATTATAGAGTTCAGTTGAATAGTTTAACCAAATTTTTTAGTTTCATTACTTTGATAATTTGTCATTTAGGATCACTCTTGTGTTGCACTATTCTCACGAGTCCTCTTGGATGTTTTTACATGTTATAGTTAGATTGTTACTAAAAAATTTCGCAGACCACTTTTTTACTATGTTGTTCTATAATTCACGAATAACTTCAACCCCTACCTAACAATTTTTTATTATTTACTGATACTCTTTGAATTGTTGAGAGCTAACTATTTTGGCTAATATCCAGGTGAAGCTCTGCTTGATCTTTTACATTTCCTCAATGATTCCAATAAGCAAATAACGGACTGGGACAGCCATATGGTTAGCCCGTGTTTCAGTTGGTCTCATGTCACTTGTAGAAACGGACATGTCATATCACTGTAAGTTCATCATCCTAGAAAGTATTAAGTTGCATGTTTGGTTAGACATTTGGAACCTCGAATCCAAGCTTTTGGATGTGAAAAATAGAAGTTATTCAAAGTTCCTTCAACTTGAATGTGGATCATGGATCTAAATTTAATTTGATCTGGAGCCAAATTAAACTCTCAATAAATGTTGTTTATTGCTATTATATTCCAAGTCAAGTCTCATCATCCTTTATTCAAACACCTTTATTGCATATAGGAACCTCTCAAACATTTGGAGGAATTTAACTTGTCGGTGTTATTCAATCTACAGGGCCCTGGCTTCGGTTGGATTTGTTGGAACACTGTCTCCCTCAATTACCAAGTTGAAATATTTGGTTAGCGTGTAAGTTGTCAGCATGATAAGTTGACATTTATAAGAAATCGATGTAAAATATACCAGTCTTTGGTTTAGCGAAACAGATTGACCAGTGATGTGTTTTTTTCCTTACATTATATAGTGATCTGTCTTGTAATGCAGGGAATTGCAGAACAACAATCTTTCAGGACCCTTGCCCGATTACATTTCCTACTTGAAAGACCTACAATATCTAAATCTTGCTGACAATAATTTTAATGGTTCTATACCAGATAAATGGGATGAACTATCCAATCTAAAGTATCTGTAAGCCATCACTTTCCATTTTTCTGGTCTTTCTATCCTTTTATAGCAATTGAAAATGATGGTCTCATGTGATTCAGTGTTTTGAGAATGAACAACTGTTCCTCAATCAATTGCAAATCCTAAAGGGTCAGCAAAACTATACAAAATTGTAACCCAGAGACTATTTTGGTTATCTTTAGTTGTTGCCATACTCATTCTTAAAATATCTGTCCATTATGTCTTCAAAATATACTGATTGACATTGATTTTAATGTTTTAAAATATATCAAAAAGAATTAAAATATACCAAAACATCTGTGTAACACCAAAAAAACCCAATACAGAATTTAGACTCAGTTCTTTCTACCTTGATCTTGAATAATATAACTGACTTGTGTTTTCATTTGACAGGGATCTTTCGTCTAATGGTCTTACTGGAAGGATCCCAATGCAACTCTTTTCAGTTCCAATGTTTAAGTAAATTTTATTACAACTATGTATTCATTTGAGTATTTTCTTTTAATGAAAAGCATTTTTTCATGCTCTTATGAAATTTTGTTTCAATATTTGCTTTCAGCTTTTCAGACACGCACCTTCAGTGTGGTCCTGGCTTCCAGCAGACTTGCACTTCTAAATCTGAAAATCCAGGTTTGATTGCTTACACACAAACAAGCAGATTGTGCAAATATGCTTTGTTACCTATGAACTTAAATGTAATCTAAGTTGAAGAATATGAGCTATAAATGAAATAAAAACAAAAAAGGTTTGCTAGTGGCTACCTAATGTTGACATCTTCCTGCAGATTCAACCCACAAATCAAAACTGGCAAAAATTGTACGTTATGCAAGTTGTGGTGCCTTTGCACTTCTGTGTCTTGGGGCTATCCTTACATATCGACACCATCAAATGCGTAGGAACAAAAGGGACGTCTTTGTTGATGTTTCAGGTCATTCTTCCTTTCCTTAATTAGCTTAAAAAATGTCCTAGTAGCACATAAGGAAATGCTCGTCTGAGAAAAGAATGAGACTAATTTACACTCACAGTTTTGTCAGATATTATTCGTTCTCTTTATCCTAATAATTCTTTTATAATGACAATATAGAAAACATTATATTTAGATTTGGCTCCTGGAAATAAGCAAATTGGCTAGAGCACGTAATTTTACTTCTTGACTAGAAACTTATCGGCTAATATTTTAATATATTTATGATCTGGTTTAGTATTTGTTAATTTTCATGTGTGAAAAATAATACTTCAATATAAAAAAACAACCATTTAACAACTATATTATAATAATATAATAATAAGAATGAATGATTGTCAAGTTAAATGAGGTTTTCACAGATGAAGTTGTCAAAGTATCATTGTACCTTTCATATTAAAGACTCTCATTATTTATTTGCTGATTTAGAGATTGAACATTGATTTTACAAGAGTTGTTTTTAGCAGTGTTAGAAGAGTTACATCCGTAAACATATATGTATACAAATAAAATGAGCATTGACGAGTATCATAATTCATTTGCACCCTCCAAGTATTATAGATTATTTGAAGAGTTTTAAGCTATGTTTAAATATATAGATAACAAAGCTTAAAAAAGAAACTTCTCATAAAGTTTAAAATTTTCTTAAATTTCATTTTAGTTCTGTTTTCTGTGAACAAACAGGGTTGAGGCATATTCCATACAACTTAGAAAAGTGATAGTAATATCTGACAAATTTATTGTACAGGTGAAGACGAGAGCAAAATCTCCCTTGGGCAATTGAGAAGATTTTCTTGGCGTGAACTACAGCTTGCCACCAAAAATTTCAGTGAAGGCAATATAATTGGTCAGGGTGGTTTTGGAAAAGTGTACAAAGGAGTACTCTGTGATAACACCAAAGTAGCTGTGAAGCGCCTCGTTGATTATCACAACCCTGGTGGAGAGGCTGCATTCGAGAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAGAAACCTCTTAAGACTGATTGGCTTCTGCACAACCTCAACTGAAAGAATCCTTGTATACCCTTTCATGGAAAATCTCAGTGTAGCTTATCGACTGAGAGGTAAAACTACATTGCTGACTTTAACATTTTGAACATAATGTGTATATTTTCTTTTACTATTCTGTAATGCAATTTGAAAGGGTGAGCAAAGATGAAGAGATATCATCAGTCTTTAGTCAAGGGAAATAATTGAATTGGTTATTTGCTTCATCCCTTTCCAAGTTTTGTTCTTTTTGTTTAACACTATTTCTCTATGCTGCCTTAGAATTAAAACCAGGTGAGAAAGGCTTGGACTGGCCAACAAGAAAACGTATTGCTTTTGGCACGGCTCATGGTTTGGAGTACCTACACGAGCAATGCAATCCGAAGATAATACATCGTGATCTAAAGGCTGCAAATATCCTTCTAGATGATGAATTTGAAGCTGTTCTTGGTGACTTTGGGCTGGCCAAGCTGGTTGATGCAAGGATTACTCATGTCACCACTCAAGTGCGTGGCACAATGGGTCACATTGCCCCAGAATATTTGTCCACAGGAAAATCTTCAGAGAAGACTGATGTATTTGGATATGGCATAACACTTCTTGAACTAGTCACCGGTGAGCGTGCAATAGACCTCTCTCGGCTTGAAGAGGACGAGGATGTTCTTCTCATCGATTATGTAATCTGCCTCACCATTTACTTTATCACATCACATAAATGCTGCTTAATAAGATGAATTCTGATTAGCTGACAGTGAAAAAGTCTTTACAATTTAACTGACGAAGTTTGAATGTATAGGTGAAAAAGCTGCTGAGAGAAAAAAGGTTGGAGGACATGGTGGATAGAAATTTGGAGAGGTATGATCCAAAGGAAGTTGAGACCATTCTTCAGGTTGCATTGCTTTGCACCCAAGGGTACCCTGAGGATCGTCCAAGCATGTCAGAGGTGGTAAAAATGCTGCAGGGAGTGGGATTGGCAGATAGATGGGCTGACTGGCAGCAACTTGAAGAGGCCAGGAATCAAGAATTCTCACTCATGACTCACCAATTTGTTTGGAATGATGAATCTACACTTGATCAAGAAGCCATACAGCTTTCCAGAGCAAGATAA