Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03246 LG1 45277322 45282504 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of defense response to bacterium, regulation of defense response to fungus, pattern recognition receptor signaling pathway, protein phosphorylation, regulation of defense response to bacterium, regulation of defense response to fungus, regulation of defense response to fungus, protein phosphorylation, protein phosphorylation, regulation of defense response to bacterium
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   MAP kinase kinase kinase activity, MAP kinase kinase kinase activity, protein kinase activity, protein binding, MAP kinase kinase kinase activity, protein kinase activity, protein kinase activity
Pathway   B 09132 Signal transduction   C 04010 MAPK signaling pathway [PATH:ko04010]
SNP Position Effect Amino acid change
T/C 45277337 missense_variant p.Glu583Gly
T/C 45277735 missense_variant p.Lys487Arg
C/A 45277760 missense_variant p.Ala479Ser
C/G 45277768 missense_variant p.Ser476Thr
A/G 45277855 intron_variant
A/T 45277893 intron_variant
C/T 45278013 intron_variant
A/C 45278037 intron_variant
C/T,* 45278619 intron_variant
A/T,* 45278620 intron_variant
A/G,* 45278621 intron_variant
T/A 45279162 missense_variant p.Glu402Val
T/C 45279165 missense_variant p.Tyr401Cys
A/T 45279785 intron_variant
G/T 45279857 intron_variant
C/A 45279960 missense_variant p.Gly327Trp
A/G 45280035 intron_variant
A/C 45280195 missense_variant p.Phe277Leu
T/G 45280256 intron_variant
G/A 45280502 intron_variant
T/A 45281223 stop_gained p.Lys155*
G/T 45281238 missense_variant p.Leu150Ile
A/G 45281475 intron_variant
C/A 45281688 intron_variant
G/T 45281983 intron_variant
A/G 45281984 intron_variant
G/A 45282107 intron_variant
T/C 45282110 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03246.1
MPAWWSRKWSRSKEEQEAEEEEEEEPRGGFQLSFLKSPVAVRRGDVSKGKRNKKKPKSFDDKLKGVPLPRPTHSHSDQIQTFGSLSVSGSSVSSSTSFDDHPISPHFNANRGQDEVRFNVRSKSPGPGSRGPTSPTSPLHPRLHALSLNSPTGRQDEGRSECHPLPLPPGSPTSPSSVLSSSITRPNGLLENATSNVSKWRKGKLLGRGTFGHVYLGFNSENGQMCAIKEVKVVSDDQTSRECLKQLNQEINLLNQLSHPNIVQYYGSELVEESLSVFLEFVSGGSIQKLLQEYGPFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPYWMAPEVVMNTNGYSLPVDIWSLGCTIIEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIKLCLQRDPSARPTAQMLLDQHPFIQDQSATEAANPVLESHSNRTSITAFDGDYASKPALAAPRASRSPRDNTRMILSLPVSPSSSPLRRYGPMHQSCYFSPPHPAYTTMGQSSYTLNDVCSYPMRSNAPLTLDPWHETSRFKANTPPGGSPRMRLI*


CDS Sequence:
>Vu_03246.1
ATGCCGGCGTGGTGGAGTAGGAAGTGGAGCAGGAGCAAGGAGGAACAGGAGGCCGAGGAGGAGGAAGAGGAAGAGCCACGTGGCGGGTTTCAGTTGAGTTTCTTGAAATCTCCGGTGGCCGTTAGGAGGGGTGACGTCAGCAAGGGAAAAAGAAACAAGAAGAAGCCGAAGAGCTTCGACGACAAGCTGAAAGGGGTTCCGTTGCCTCGTCCTACTCACAGTCACAGCGATCAAATTCAAACGTTTGGATCTCTATCGGTGTCGGGTTCCAGCGTCAGCTCATCCACCTCCTTCGACGATCACCCAATTTCGCCTCACTTTAATGCCAACAGAGGACAAGATGAGGTGAGGTTCAATGTGAGGTCAAAAAGTCCTGGTCCTGGGTCAAGAGGGCCTACTAGTCCTACCTCACCGCTTCATCCAAGGTTGCATGCTTTGAGTCTTAACTCTCCTACGGGGAGGCAAGACGAGGGAAGGAGTGAATGTCATCCGTTGCCTCTTCCTCCTGGTTCTCCAACTAGTCCTTCTTCTGTGCTTTCCAGTTCCATCACACGACCAAATGGACTGTTGGAAAATGCTACAAGCAATGTGTCCAAGTGGAGAAAAGGAAAGCTTCTAGGACGAGGAACATTTGGGCACGTGTATCTGGGATTCAATAGTGAAAATGGGCAGATGTGCGCAATAAAAGAAGTCAAGGTTGTCTCTGATGATCAAACATCAAGAGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTAAATCAGCTTTCGCACCCTAATATTGTTCAATACTATGGGAGCGAACTGGTAGAAGAATCACTTTCCGTATTTTTGGAATTTGTCTCTGGTGGTTCCATCCAGAAATTACTTCAGGAGTATGGTCCATTTAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGCAAGAAATACCGTACACAGGGATATCAAAGGGGCAAACATACTAGTTGATCCTAATGGTGAAATCAAATTGGCCGACTTTGGAATGGCTAAACATATAAATTCTTCTGCCTCAATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTGATGAATACAAATGGCTATAGTCTTCCTGTTGATATATGGAGCTTGGGATGCACAATTATTGAAATGGCAACATCTAAACCTCCTTGGAATCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCTGAGCATCTCTCCAATGATGCAAAGAATTTCATCAAGTTATGCTTACAAAGAGACCCATCGGCTCGCCCGACGGCCCAAATGTTACTAGACCAGCACCCGTTCATTCAAGATCAATCAGCAACAGAAGCTGCAAATCCTGTGTTAGAGTCCCATTCGAACCGAACAAGTATAACTGCGTTTGATGGAGATTATGCATCAAAGCCAGCTCTTGCAGCCCCACGTGCATCAAGAAGTCCAAGAGATAACACAAGAATGATCCTATCTTTACCGGTATCTCCCTCTTCAAGTCCATTGCGACGGTATGGGCCAATGCACCAGAGCTGTTACTTTTCACCTCCTCATCCAGCTTACACAACAATGGGACAAAGTAGTTACACTTTGAATGACGTATGCTCGTATCCCATGAGGTCAAATGCACCGTTGACTCTTGATCCTTGGCATGAAACATCTCGGTTCAAAGCCAATACACCACCTGGTGGATCTCCAAGAATGAGACTCATTTGA


Promoter Sequence:
>Vu_03246::LG1:45282504-45284504(-)
CCAGAAGATACTAGTAGGCAGTATCTTGACTTAATAAGAAACATCATCAAAAAATACATGCAGGTTTTGGTGTAGGAAACATACCCGATATTTGGTGTCCGACTAAGTAATGTATTTTTCATAAAATATCCAATGGTCGTCCTATCGATTTCAAACTATTCGACACTTGATACCCAATAAATAATATCATGTTATTGTCTTAAATAACTCATTTAAAGGTTGTAGTGAGTCTAACCGAAAGATGTACGACCATATATAATATAATAACAAAAATAAAACTAATACAAGTTTTTTAGGAATATATTTAACATTTTTAAAAATTTAAAAGAAAACATAACGTAATTTATAAATATTGGAATGCATAGGTAAATTTTTTAGCTATTGTTTAGATTATATATTTGGAATTTTGCAATAGTTACTTTACAAGATTATTTAGAACAGGAGTACTATGCCTTGTCCAGTGGTTTGCCTACAGCAACACCATTATTAGTTTGATCTTTGAGACAAGACACTAGTATATATGATGGATTATTTATTTTTTAAAATTATTAAAACAAATCTTTGTAAAAAATGTAAATATTTAATTCACTAAAAACTATTACTTTCCTTGTATTTTATTTGTTTAAACTAAATGCGTTTTCCATCTATTTTTCATTGTTTTCTCTTTTTTTTATTAGAGAAAAAAACCAAAGTTATTTAATGTTCATAAAAAAATTTCTCTAACTTAGTAGTGCGTCTAGAAATCAAACTGTTTAACTAAAATATTTTGACAAGCATTGAATTTCATTAATTTAAATTTTAATAAAATTCACTAAGTACATAAAAAATATAAAATTATATGCAATTTTAAAAGTATTAAATATTTTGTGAATAAATTATTGTAACGTGTTACATACTTTTTCCCGAATAAGTAACACATTACAAAAGATGAATCTTGGAGATTTGAATCACGCTATCCATATGCCTAAGGCGGCATCATGGGTAACATCTAAAGTCTTGTTTCTTTTTAAAGTTTTATCAAACGAATAATATTTTATTAAATTAGTTTCACGTTACGTGCATGGGATGACACGAATGCTACCACATGTGTTTCTCAGAGAAGGATCCTACTTTTTTTCTTTCGAATAAAAATCTCATTCATTACGGACTTTTACATTTCGTTTTTTTTGCTCAAGGAGGATGTACTATATTCCAAAAATAGACCACACTCACTCCTCATAAAAACATTTCCAATTCACATAAATTATTATAAAATTAAGAAAAAATATAGTACTAGAGTTTCAACTTCTTGGTTTGTAATAATGAAAAAAAATAATTATGGAGTGTTTGATACACTACATTTACATAGACATTTGTCACATTAAAGTGAGTGAGAGAGTAAGATGAAATATGTGTACACTTTATGATTGGATCTTTAAAAGAAAATAAAATAAAGAGAAACATAACCCCTTCATAATAAAACAAACAAAACCTCCCCTGATTTGTCCCATCCAAATCCATTTTTCCTTCCTACAATAAACAAATAAATTTTTATTTAAAACTAATTTTGAGTTAGTACAATACAAACTAAAATTATTATAAAATGTTAAATTAAATTTAATGAAATAATATAGTGAAAATGTAAATGCAGACATATAAATAAGGTAGAACAGTGTTTGTCTAATGTAATTCATTTGATGTTACTCAACTGAACTGAAACTGGTCCCATGTCCAGATAATTACAAACAACCAAAGAAAGAAACCCACATCACTACCTCCACCATACCAAACCACACACGGGTTATACCTAAACCAAAACACGGTCGTTTATGGCATCCACTCACTTAATAATTACTCTAATTTTGTATTCCCTTTCTTGTTCTAATCCAACCACCACCACCACCACCACCACCACCGGCGGGTGTGTCGCCTTTCAGGACTAGCCTTTTTGGCTCTTCTATTTTCGCACAAAAGCACTTCTTTTCCTCTCCCTTTCTCAGAAATTTGGGAACTTGATTAGA


Gene Sequence:
>Vu_03246(-)
ATGCCGGCGTGGTGGAGTAGGAAGTGGAGCAGGAGCAAGGAGGAACAGGAGGCCGAGGAGGAGGAAGAGGAAGAGCCACGTGGCGGGTTTCAGTTGAGTTTCTTGAAATCTCCGGTGGCCGTTAGGAGGGGTGACGTCAGCAAGGGAAAAAGAAACAAGAAGAAGCCGAAGAGCTTCGACGACAAGCTGAAAGGGGTTCCGTTGCCTCGTCCTACTCACAGTCACAGCGATCAAATTCAAACGTTTGGATCTCTATCGGTGTCGGGTTCCAGCGTCAGCTCATCCACCTCCTTCGACGATCACCCAATTTCGCCTCACTTTAATGCCAACAGGTTGTTCCGCTTCTGATTCCTTCCTTCCTCGGTTTTCGACACCGTGTCTCGTAGGAGTAGTGATGCCGTAACCATTTCCCATCATTGATTGCATAAAGTACACTGATTACTGATTACTGATTTCTGATTTCTGATTCATTCCCTTTCCTTTCTCTCTCCTCTGCCTTTTTCTTTTTTATTTTATTTTTTCAATTGGAAAAAATGAAATTGCTGGTTATTTTTGTTAAGGATTCTTTCTTGGTTGTGATTGAAAAGTGACAATTTGTTCTTTATATACATGTGGAAAATATTGTTCAGAGACAGAAAGTTATCTACTGGATCCCCCTCTGCCAAATTTCTACTTTGAACTTCTTTGTTATTATGGGGGTTTAAATTGTGGTCGAGTTGCATACACGGTTTAAAGCAAAGGTCAGGCTCCGCGTTTTCAGTTGCAACTTTAAGGTTTTTCGGTGTCTCACTTGTAGTCGTATCAGTCGCATTTATCGGCACTTTATTGCAATATTAGGGTCATGGTTGTGATCATAATTTAAAACCTTTGTCGTAATCTTTGACAGAGTAGGAAATTGCCGACGGATGAAACTGATACCGTTTTAAAGAGCCCATAAGCCTTGACTTAGAGGATGAAATCACTGTGGCAAACCGATTTAGAAAACCTTTTTTGTTAGGAATTGTAAGCCATGTGGCTATGACAAATGGTTGAGATTATAGTCTGTGATTATTCGTGCTGATGGTGTGAGGAACAGAGAGAATATGGAATGTTCAGGAGGGTGTTTTTCCAATCTGGTGCTGAACTAATTCATGTTTTGTTTATTGTGCAGAGGACAAGATGAGGTGAGGTTCAATGTGAGGTCAAAAAGTCCTGGTCCTGGGTCAAGAGGGCCTACTAGTCCTACCTCACCGCTTCATCCAAGGTTGCATGCTTTGAGTCTTAACTCTCCTACGGGGAGGCAAGACGAGGGAAGGAGTGAATGTCATCCGTTGCCTCTTCCTCCTGGTTCTCCAACTAGTCCTTCTTCTGTGCTTTCCAGTTCCATCACACGACCAAATGGACTGTTGGAAAATGCTACAAGCAATGTGTCCAAGTGGAGAAAAGGAAAGCTTCTAGGACGAGGAACATTTGGGCACGTGTATCTGGGATTCAATAGGTAAATAACTTTATTATCTTTTAGCTTTCAAATACAGGAAATTTACGGTCAATATTAACATGGGACAGCTTTGTAGTATGCATAATTTGCAGTGTTCGAATTTGTGGTTTTGCTACCCTATGTTTGTACTGCATGACCAATAATCAAAAGAGAGTTATTACCACGGATTGAGAAATTAATTACTTAGTTTAAAGTATGATAAATAAATTACAAAGTAGTTATTTCTTTGATTTTCAAATTTACAATTACAGTGCTACCATATTTTCAAAGTTATTTCATCATTGATCCTTTGGAATGTTTACTCTCTGCCCCAATGTTCATATTCTGTACAAATTACTGAAACAATTTATATTCCACTTCCTACGTTTGACAGTGAAAATGGGCAGATGTGCGCAATAAAAGAAGTCAAGGTTGTCTCTGATGATCAAACATCAAGAGAGTGCCTCAAACAACTTAACCAGGTAATATGATGTTTTATCTAGATTTAAACATGATGCTCTAACACATTATATAGAAATTTTGGAGCTCTTGCACTGTTGTGTTCGAGTTTGTTTTGATATGTCTAATTATTATATTATAGTCCACAAGGTTAAAACAAATTCTCTACTTGATTGCAGGAGATAAATTTGCTAAATCAGCTTTCGCACCCTAATATTGTTCAATACTATGGGAGCGAACTGGTATGCTTCAATATTCAAAGTTTAAAACCATTTTAAACATGTATATACCTAATACTCCTGTGTGCCCTCAAAAGAAAAACTGAAGAATTTCACCGACATGTATGTAACTAATAGATTTTCCATTTTCAGGTAGAAGAATCACTTTCCGTATTTTTGGAATTTGTCTCTGGTGGTTCCATCCAGAAATTACTTCAGGAGTATGGTCCATTTAAGGAGCCTGTTATTCAAAATTATACCAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGCAAGAAATACCGTACACAGGTAATCGCTTATTCCTACTGAATTTATAATGTTGCGTTTAAGCTTCTTCATTCTTTCATATTATCAGCGTAGTTTCCTTTTGACAGGGATATCAAAGGGGCAAACATACTAGTTGATCCTAATGGTGAAATCAAATTGGCCGACTTTGGAATGGCTAAACATGTATGTTCATCTTATCCTGTACAACAAATTGCTTCTAGCTCACTTCAAAAGTAAACTGCATCTACTGTTTTGTTAGGAAAATAATTAACTATGCATGTGATAGTAAAATTTGGTGAAAGTTGTTACTTAAAATTATTTTGCATGCTCAAGGTCAAAAGTTGCAAGTCTACTGATTCCTAGTAGCAGAGACATCTCTCTCTCTTGGATGCACATGCTCCATCTCACATTTGTGCACTCCCAGTCTCTAAAATTGAGCAGGAGAGTTGGCATACATAAATCTCACCCTTACACGATGCATCCACGCCCTCAAAACACAAACTCTGTTTCTCTGAAGTGTTTTATAATTCCTATTAGATTTGACTGCTAGAAAGGAAATATAATCTAGACAGCTTAAACAATGATTTTGTATGCTTTATTCATTTCTAATGCACTGTCTCTTACATTTTATGGTCCTGACCAGATAAATTCTTCTGCCTCAATGCTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTAATAAGTTGTTCTTGCTATGCTTCTGCAATGTTGAAATTTCTTTTGAAGTCAGCATATTCTTCCTTCTTTCTCGCCGAAACTACTTTATAATGATATTTCCCTTTCAGGTTGTGATGAATACAAATGGCTATAGTCTTCCTGTTGATATATGGAGCTTGGGATGCACAATTATTGAAATGGCAACATCTAAACCTCCTTGGAATCAGTATGAAGGGGTAAGATAATGGATATTTCAGAACTAGCCTGTTATGATTCTGTTTGATTAGTATGAATGGCTAAAATTGTTTTCGTGTGGATTAAACAGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCTGAGCATCTCTCCAATGATGCAAAGAATTTCATCAAGTTATGCTTACAAAGAGACCCATCGGCTCGCCCGACGGCCCAAATGTTACTAGACCAGCACCCGTTCATTCAAGATCAATCAGCAACAGAAGCTGCAAATGTCAGCATAACCAGAGAAGCTCTACCTTACATGTTTGATGGAAGCCGGACACCGGTATATATTCTTGGCTATATATATATATATATATATATATATATATATATATATATATATATATTTCTTTTTTTCATGTGTTGTGTTACTTCTTACATACTAGTTCCGACATGCTGCAATTGTCCTGAAGTTTGGATGACACAAGATGTTATAAAGTATTTGATAATATGTAAAGATGATGTATAATTACTTGATTTAATATATCAATTGTTGATATATCAATTGACCTGGTTATTATCTATATGCCAAATCACTATGATTCAATGTCAGGATATCATCTCTTGGCTTGCTTAGGTCTTTTAGTCATGTATGTAGATGGATTTTGTACTCCATCATATATAGTATTATTAAACTCTAAAGTAAAGTAACTGAAGTGGTATAATTAACCTCGCCTAATTGGTTGTTCACATCATTGTTGTGTTTGTTTACAAAATAACTTAGGCTACATACATTTCCTTTGGAATTTGATCTTCTTCCTGCTTTTGAATGATGTTGACTTGTTTTGATGCATATCTATGGCAGAAATGCCAGAAAAAGTTGAAGTTGGAGAATAAACAAAGGAAGCCATTACTTGGTATTGAGTGAAAAGGAAAATATATGAATATACCATCGCAGTGGAGTATATATTAGAGGGGACTTAAATGTTGTCAGACATATGTGGAGGATACCACTAGTTTTTGAGTCAAGATTTTTCTTTCTCAAATAGTTATGATAAGGTTCATTTTGTAGATTTATAAACTTGTCATGTCAGTTTGTCCAAACTCGTAAAATTTAAAGCATGAATGCTTGATTTTAGGAATACACCAAGTCCCTTTGGAAGTTGATCTTTGGAACAAACCCCAAAAAGGACACTTTTGCTTGTTTGTTTCCTCCCTGTAACATGTCTCGGGCCTGTTTCTGACAAAAACAAAATAAACATGTCCAAAATTTAACACTTTTCTTGCCCTGAATGATGTGGTTTCAAAGTTGAACATTCTGAGTAAATGTAGAACTGGAGTTAACGTTTTCATCATTTTTATCTGTTTTCAGCCTGTGTTAGAGTCCCATTCGAACCGAACAAGTATAACTGCGTTTGATGGAGATTATGCATCAAAGCCAGCTCTTGCAGCCCCACGTGCATCAAGAAGTCCAAGGTAAAACTATCCACCTGTTAATCATAATTAAGGAACGAATTTAGATCTTGATACAATCATCATTTTTATGTTATATAGACTGAAATTCTTCAATGATTCCCTTGTTCAGAGATAACACAAGAATGATCCTATCTTTACCGGTATCTCCCTCTTCAAGTCCATTGCGACGGTATGGGCCAATGCACCAGAGCTGTTACTTTTCACCTCCTCATCCAGCTTACACAACAATGGGACAAAGTAGTTACACTTTGAATGACGTATGCTCGTATCCCATGAGGTCAAATGCACCGTTGACTCTTGATCCTTGGCATGAAACATCTCGGTTCAAAGCCAATACACCACCTGGTGGATCTCCAAGAATGAGACTCATTTGA