Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03273 LG1 45584028 45585196 PREDICTED: dnaJ homolog subfamily C member 2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   'de novo' cotranslational protein folding, root hair elongation, root hair elongation, regulation of translational fidelity, root hair elongation, root hair elongation, root hair elongation, root hair elongation
Cellular Component   is active in   cytosol
Cellular Component   located in   endoplasmic reticulum, endoplasmic reticulum, endoplasmic reticulum, nucleus, plasma membrane, nucleus, nucleus
Molecular Function   enables   ribosome binding, Hsp70 protein binding
SNP Position Effect Amino acid change
G/C 45584038 5_prime_UTR_variant
G/C 45584216 synonymous_variant p.Ser56Ser
A/G 45584328 missense_variant p.Asn94Asp
G/T 45584723 missense_variant p.Arg225Ser
G/A 45584817 missense_variant p.Ala257Thr
A/C 45584918 missense_variant p.Glu290Asp
A/T 45584922 stop_gained p.Lys292*
A/C 45584945 missense_variant p.Lys299Asn
T/A 45584948 synonymous_variant p.Ala300Ala
C/T 45584954 synonymous_variant p.Ala302Ala
A/C 45585041 3_prime_UTR_variant
A/T 45585161 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03273.1
MEFLDEDARPRFVFQSGAVASTEPPHPDHKPTKPFLFVTISLSSLFLALSLFFLESEPFKSLLFWLALSLLIGPFAPPSLTGGDVRVGLGEVVNFPDPEPETDDDARKPPQRRSRQRRPEEVAAIGPVVSVSTAEKRGGGGGVEKVSTVVEEKDWNEEDVEVLKKQLVKNPVGKPGRWEAIAAAFGGRHGVESVIKTAKELGEKKVDDSDSYALFLKNRKALDKRVVEENGGEDSVTVDKVVENGWSSGEDIALLNALKVFPKDVSMRWEKVAAAVPGRSKAACMRRFTELKKGFRNAKAAAE*


CDS Sequence:
>Vu_03273.1
ATGGAGTTCCTGGACGAGGACGCGAGGCCGAGGTTCGTGTTCCAGTCCGGTGCCGTTGCAAGCACCGAACCACCGCACCCGGACCACAAACCTACCAAGCCGTTCCTCTTCGTCACCATTTCTCTCTCTTCGCTCTTCCTCGCTCTATCTCTCTTCTTCCTCGAATCGGAACCCTTCAAATCGCTCCTATTCTGGCTTGCGCTCTCTCTCCTCATCGGCCCCTTCGCTCCCCCCTCCCTCACCGGCGGCGACGTCCGCGTCGGCCTCGGCGAGGTCGTCAACTTCCCTGATCCGGAGCCGGAAACCGACGACGACGCTAGGAAGCCTCCGCAACGGCGATCCAGACAGCGGAGGCCCGAGGAAGTCGCCGCCATCGGCCCAGTGGTGTCCGTCAGCACCGCGGAGAAGAGAGGGGGAGGCGGCGGAGTGGAGAAGGTTTCGACGGTGGTGGAGGAGAAGGATTGGAACGAGGAGGATGTGGAGGTGCTGAAGAAGCAGCTGGTGAAGAATCCGGTGGGGAAGCCAGGGCGGTGGGAGGCGATAGCGGCGGCGTTCGGCGGAAGGCACGGTGTGGAGAGTGTGATAAAGACGGCAAAGGAGTTGGGGGAGAAGAAAGTGGATGATTCGGATTCTTATGCATTGTTCTTGAAAAATAGGAAGGCATTGGATAAGAGGGTTGTGGAGGAGAATGGGGGTGAGGACTCGGTGACGGTGGATAAAGTTGTTGAGAATGGTTGGAGTTCTGGCGAAGATATCGCGTTGTTGAATGCATTGAAAGTGTTCCCTAAGGATGTTTCAATGAGGTGGGAGAAGGTTGCTGCGGCGGTTCCCGGGAGATCCAAAGCTGCTTGCATGAGAAGATTTACTGAATTGAAGAAAGGGTTTCGGAATGCAAAAGCTGCAGCCGAGTGA


Promoter Sequence:
>Vu_03273::LG1:45582028-45584028(+)
CGAGTTTCTGCATTCACTGTAAGGATACTCGGACGTCACCAACTCAAGCATGCACATGCCAAACGAATATATGTCAGCTAATTCATTGTAATTTTCATCATACAGCTCTGGTGCCATAAACTCCGGGGTTCCTACCAGGATTAGGTAGGTTTAAACAGAACAAGTATATCAATCAAACAGCGTTGGGACAAAGAATCAAAATCTATTACTATTGCTATAACTGAGATGAGAAAATGATTAAAATTGTGTTAACTTTGAACTCAGCAAAAGATCAACACATATATATATATATATGAAAGAACAAGAAAGCGCAGGGAAACCGAGGAGAATACCAATAACACTCTTGGCATTACTTCGGTTCAAGAAAGTTGCTAGCCCAAGATCTCCAATTTTAACTTCTCCTTGGTGACCATTGATAAATATATTATCACATTTCAGGTCCCTGTGAATAACGGGTGGGTTCTGACCGTGGAGATAGCTTAGACCCATTAAAATTTGTCTTGCCCATCCTTTAACGGCCTTCAAGTCGACCTTCTTGTGTTTTTTACGAAACCTATATCATGCATTGCATCCACTAACGAAAAGGTTGATTTCACAATAAAAAGCACAAGGATTTTAATATTATGCACAAAATGGAAGGTGAACGTACTGTTTGAGGCTACCCGAGGTAAACAACTCCGTAATCATATTAACGGTCCTGCGCTTGTCATCAATCCAGGAATTGTAGAATCTTACTATGTTATGGTGCTTCAGTGATCTCAAGAGGTGTAATTCTGAATATAGCCTATCTAAGTCACCGGGGGATTGCAAAACCTCATCAATCTGAACCTGACTCCACGCAACTTCAATTCCATTGACTCCATCAAATGCCTTGTAACTGATTTATCCACAGTTTTAAGGAAAACATATATAACCAGAAACAATCAAGGTTAACCCCAATCATAAAATTCTTTTTCTTAACCACAAAAAAAATGCACAGCATTATATCGAAGACCTAGACACCTCTGGCAGTAAAAAAATGTTTTAATTTCGGCAGCACAGTAAAAACAGTCCATAATAAAATAAAGCATTGTCTTCTAGTTACAATGCTGCCAATGAATCGAAAGCAAACATGTATATTAAGAAAGTAACGGATACACAGTTTTAAAAGCTCCTCTGCCGATCACTTCTTTGTACTGTTGTGAATGCAAAAGCAGAATTAGCCCGGTGCATTAATATGTAAGTGTAATTTTGTCCCAAAGACAATAAATATAAGCAATGGAAAAACAATCATATTACCTTGACGTAGGTGCAAGTTGGATCAATTTCAACAAAGTCAGGATCAGGAGGCTCCAGATAACCTGCACCATCTTCTGAACTTCCTGTCCCCTCCAAACTCATTTACACGGCACTGCGATCCAAACCTACATTCAATTCGAAATCACGAAATTGAAAACCCAAGCAAACAAATATGAATTAAAAAATTGCACCAGGTCGCAGTCAGGAAATTACGTGAATGTCGGAAGAGAAAAAAATGAATGCAGCCCAGTTTGTCCTTTTTACCTTAAGAGCGGTTACGATAACTTGATCGCCAAACAGAACCCTAAATGAAATAGAAGAATTAGTAAAACAATGGAGATACGAAGTTTGGGGAATGATAAACATGACACTTTTTCTGTATCCAGAAAACACTGCTCTCTATTTATAATTATCCATCTTAATTCTCTTCCTTGTAAATAAATATCTTCGCAGATCACAATCATTGCTTGTTCCTGTCTCCGTCATCTGCATTCTACATCGCCGTCACACTCCATCGTACACTGTCCCTGTCGTTTTCCCATGCTTTCATGGGACTACATATACTACTTATACTACTATATACTGATGCTGATGTGTGTATATATTAATAACTGAAAACATCCTTAATGGGCCTAGCAAATGAAGACCCATTGGCCCAATAAGATGCTGACCACAACATATGAAAAATGTAAACGATGGCGTTTTATGATTTTAGAGTTTTG


Gene Sequence:
>Vu_03273(+)
GTTTCAATTGGGTGTGCGAGAATGGAGTTCCTGGACGAGGACGCGAGGCCGAGGTTCGTGTTCCAGTCCGGTGCCGTTGCAAGCACCGAACCACCGCACCCGGACCACAAACCTACCAAGCCGTTCCTCTTCGTCACCATTTCTCTCTCTTCGCTCTTCCTCGCTCTATCTCTCTTCTTCCTCGAATCGGAACCCTTCAAATCGCTCCTATTCTGGCTTGCGCTCTCTCTCCTCATCGGCCCCTTCGCTCCCCCCTCCCTCACCGGCGGCGACGTCCGCGTCGGCCTCGGCGAGGTCGTCAACTTCCCTGATCCGGAGCCGGAAACCGACGACGACGCTAGGAAGCCTCCGCAACGGCGATCCAGACAGCGGAGGCCCGAGGAAGTCGCCGCCATCGGCCCAGTGGTGTCCGTCAGCACCGCGGAGAAGAGAGGGGGAGGCGGCGGAGTGGAGAAGGTTTCGACGGTGGTGGAGGAGAAGGATTGGAACGAGGAGGATGTGGAGGTGCTGAAGAAGCAGCTGGTGAAGAATCCGGTGGGGAAGCCAGGGCGGTGGGAGGCGATAGCGGCGGCGTTCGGCGGAAGGCACGGTGTGGAGAGTGTGATAAAGACGGCAAAGGAGTTGGGGGAGAAGAAAGTGGATGATTCGGATTCTTATGCATTGTTCTTGAAAAATAGGAAGGCATTGGATAAGAGGGTTGTGGAGGAGAATGGGGGTGAGGACTCGGTGACGGTGGATAAAGTTGTTGAGAATGGTTGGAGTTCTGGCGAAGATATCGCGTTGTTGAATGCATTGAAAGTGTTCCCTAAGGATGTTTCAATGAGGTGGGAGAAGGTTGCTGCGGCGGTTCCCGGGAGATCCAAAGCTGCTTGCATGAGAAGATTTACTGAATTGAAGAAAGGGTTTCGGAATGCAAAAGCTGCAGCCGAGTGAACACTGTTCTCCCCAGGATCATTTTTTTGTTTGTTTAATTTTGTTATGATTTATATTGTTTTTGGCTTTGATGAGGCATTATTTGCACCTTCCTATGGGTAATACTCATCCTATGAGTAATACATAAATTCTGTTCGTGTAACTCTATGAAATGCATTGATCTGAACAACATATGTATTTGGAATCTCTTATAGTGAAAAATAGATATTTGATATTGACTCTTTGAACTTGGAACT