Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03393 LG1 46874749 46875723 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to acidic pH, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to aluminum ion, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, cellular response to oxygen levels, cellular response to salt stress, regulation of transcription, DNA-templated, cellular response to oxygen levels, response to acidic pH, regulation of cellular response to hypoxia, regulation of cellular response to hypoxia, regulation of transcription, DNA-templated, regulation of cellular response to hypoxia, response to aluminum ion, regulation of cellular response to hypoxia, cellular response to salt stress, regulation of transcription, DNA-templated, response to aluminum ion, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to acidic pH, regulation of transcription, DNA-templated, cellular response to salt stress, cellular response to salt stress, regulation of transcription, DNA-templated, cellular response to oxygen levels, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, transcription regulator activity, protein binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, protein self-association, sequence-specific DNA binding, protein self-association, sequence-specific DNA binding, sequence-specific DNA binding, protein binding
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_03393.1
MPNTTQQFPINNINFNKDSLHVSLRNLSQLSTRMDSLQSFVSQSIQSHTLLTHHQMNIVSNEILTAIRHVITNGAALVAASEDVLSLSETPTSEYSPNQTNVVELDAMELLAQHLHFCEVCGKGFTRDANLRMHMRAHGDEFKTADALSSRARGEKRGKTTRFSCPFEGCNRNKTHKKFRPLKSVFCLRNHFKRSHCPKTLSCERCRKKSFAVLSDLRSHMKQCRGEATWKCSCGTTFSRKDKLFGHVALFEGHLPMLEEEKETSAAAAAAVVEGLVKESDGGLDGLPEGFFDGLDEFGFGSTASTSSPEKTSPWGFPQIETHF*


CDS Sequence:
>Vu_03393.1
ATGCCAAACACCACTCAGCAATTCCCAATCAACAACATCAACTTCAACAAAGATTCCCTGCATGTTTCCCTTCGCAACCTCTCCCAACTCAGCACACGAATGGATTCGCTTCAGAGCTTTGTCTCCCAATCCATTCAATCTCACACTCTCCTCACACACCACCAAATGAACATCGTATCCAACGAGATCCTAACCGCAATTCGCCACGTCATCACCAACGGCGCAGCCTTAGTCGCAGCGTCGGAGGACGTGCTTTCCCTTTCGGAGACTCCCACGTCCGAATACTCTCCCAACCAAACAAACGTGGTGGAGCTGGACGCGATGGAACTCCTGGCGCAGCACCTCCACTTCTGCGAGGTGTGCGGGAAGGGCTTCACGCGCGATGCCAACCTTAGGATGCACATGCGCGCCCACGGGGACGAGTTCAAGACTGCGGACGCGCTCTCGAGCAGGGCGCGTGGCGAGAAGCGTGGGAAAACGACGCGGTTCTCGTGCCCCTTCGAAGGATGCAACCGCAACAAGACGCACAAGAAGTTCAGGCCGTTGAAGTCGGTGTTCTGTCTGAGGAATCACTTCAAGAGGAGCCACTGTCCCAAAACGCTGTCGTGCGAGCGGTGTCGGAAGAAGAGCTTCGCGGTGCTCTCGGACTTGAGGAGTCACATGAAGCAATGTCGGGGAGAGGCCACGTGGAAGTGCTCGTGCGGAACCACGTTTTCGCGGAAGGACAAGTTGTTCGGACACGTGGCGCTGTTCGAGGGGCATTTGCCTATGCTTGAAGAGGAGAAGGAGACCTCGGCGGCGGCGGCGGCGGCGGTGGTGGAAGGGTTGGTGAAGGAAAGTGACGGTGGTTTGGATGGGTTACCTGAAGGGTTCTTCGATGGGTTGGATGAATTTGGGTTTGGTTCCACTGCAAGCACCTCTTCACCGGAAAAAACTTCGCCTTGGGGTTTCCCACAAATCGAAACTCATTTCTAA


Promoter Sequence:
>Vu_03393::LG1:46872749-46874749(+)
AAAGCTTTTATAAATAAATATTTTACTCTTTTTCAGAAATAAAGCTACACATAAAGTTTTACACTTACATGCCAACACATTGCAATAAACTTAGAGCTACCTAAAAGAATTTAAGAGCTTGTTATTTTGTTTTCTTTAACACATATTATTATTAGTTAATTCATTCTTTTAATATATTTTAATTTTAAATTTATCATTTCAGATTAATTTTATTTTTTATTTTTTGATTTTTGAAACAAGATAATCTACTTTGGTTATATGGGAAGCTTATTAATAAATATATGAATTCTTCATTACATCATGATATTATTAACTATCCAATGAGACAAAATCTCAAAACTAACAAGTTCTTGGACATCATGATTATTTATTTTCATTTTTTATTTTTGTTGTAATGTATGATAAGTATAACATTTTTGTGAATGTGGAGATGGATACAATACAATGTAAGATCCAGTTTACGTAAACTAATATATATGATTTCAAAGTATATGTAAAATAAAAATGTATTTTAAAAAAATTTATAAATATATTTAAAATAATTATTTTTTATTTATCATTAATCCAAATATTTTACTTTCTAACTAAGATTTCGGGCTCAGCAGTAACATTTTTTAATAATCATATATTGCACCACCGAACAGACAGTAGTGAATAAATACATTTTGGAAAATAAATAATTTTATTATGTAGTACGTCAACAAATTTCATACCATTTAAAGGTTAAAATAAATAAATAAATTATACATATGTTCCTCTTTTAATTCATTAAAATACCTTTTGAGATGAAATCATAATAAACCCACTATAGAGAATACTTTTAACATTTAAATGTAGTAATTAATCAAATTGATACTATTTTAATAAACTTGATATTGGAACAGCTATTTAATATATTATAAAAACCATAATTATTTATTTTTTTAACTTTTTGAGTTTATTATTTTATTTCTTTTGGATATCATACATTGTTATGTGATTTTTCTTTTCATGTTTTAATGTAAATTAGGTCAATTGGGATCAACATAAAAAGAAAAAAGGAAATATTTAAGAAGACGTCCTCAATCATAAAGAAAAATAATTAGATTAAATGTAAAAGTAACTAAATTCTAATTATTTTTACTTTATTTAAATATAATCTCCAAAAATCAACTTTGAATCAATATAAGTTTAAAATTTTAATCAAAGAAAATATTTTTTATAGGAAAAAATAATAAAATTGTTGCTAATTAACTTGAAAATTATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATGTAGGTATGTATGTATGTATGTAGGTATGTATGGAAAGAGTTTTTGATATGATAAAATATATAAAGAAAACGATGAGTTAAAAACTATTATCTATGGATACAATATCATATATGATTTGTATCTTATATGTTGATATATTTATTATATGATACTAGTGTATGTATATTGAAAAGTCTATAATAATTATTAAAAATAAAATAAATATATAATAATTATTGTATGAATTCAAATTAAAAGCATATATTAATATAAAAGATTCAAAATTTTATAAATTAAATATTTTATTAATAAATATTAATAAAATATCATATACGAATATCTGTCAAATACATATCCATAATCCAAATTGAACTATCGATATATCGTTACAAATACTTAAACTATTTATTTCTACTGATTCCAATGATTATTTAAGAACACCTATGCAAAATTTATTGGTGCAAATATAAAAATGAAAAGTAATTGGCATTACCATGACTTTAGCTTAACAAATATAATAATAAGATGGTAAAAAGAAAAAGAGTGAAAAATATAAAAGTAGTACTGTTTGTGAATTGACATCAACACGTGCTCACGTATGGACAAAAGGAATGGAGTCCTCAATTTCAAGTTTGTACAACAGACATCAGATCACACCATATATAAGTAGTGTTCATGGAAATCACTTACACTCATCATATCATCTTCTCAATCAAAACCACA


Gene Sequence:
>Vu_03393(+)
ATGCCAAACACCACTCAGCAATTCCCAATCAACAACATCAACTTCAACAAAGATTCCCTGCATGTTTCCCTTCGCAACCTCTCCCAACTCAGCACACGAATGGATTCGCTTCAGAGCTTTGTCTCCCAATCCATTCAATCTCACACTCTCCTCACACACCACCAAATGAACATCGTATCCAACGAGATCCTAACCGCAATTCGCCACGTCATCACCAACGGCGCAGCCTTAGTCGCAGCGTCGGAGGACGTGCTTTCCCTTTCGGAGACTCCCACGTCCGAATACTCTCCCAACCAAACAAACGTGGTGGAGCTGGACGCGATGGAACTCCTGGCGCAGCACCTCCACTTCTGCGAGGTGTGCGGGAAGGGCTTCACGCGCGATGCCAACCTTAGGATGCACATGCGCGCCCACGGGGACGAGTTCAAGACTGCGGACGCGCTCTCGAGCAGGGCGCGTGGCGAGAAGCGTGGGAAAACGACGCGGTTCTCGTGCCCCTTCGAAGGATGCAACCGCAACAAGACGCACAAGAAGTTCAGGCCGTTGAAGTCGGTGTTCTGTCTGAGGAATCACTTCAAGAGGAGCCACTGTCCCAAAACGCTGTCGTGCGAGCGGTGTCGGAAGAAGAGCTTCGCGGTGCTCTCGGACTTGAGGAGTCACATGAAGCAATGTCGGGGAGAGGCCACGTGGAAGTGCTCGTGCGGAACCACGTTTTCGCGGAAGGACAAGTTGTTCGGACACGTGGCGCTGTTCGAGGGGCATTTGCCTATGCTTGAAGAGGAGAAGGAGACCTCGGCGGCGGCGGCGGCGGCGGTGGTGGAAGGGTTGGTGAAGGAAAGTGACGGTGGTTTGGATGGGTTACCTGAAGGGTTCTTCGATGGGTTGGATGAATTTGGGTTTGGTTCCACTGCAAGCACCTCTTCACCGGAAAAAACTTCGCCTTGGGGTTTCCCACAAATCGAAACTCATTTCTAA