Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03541 LG1 48405221 48408188 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, response to salt stress, primary root development, response to osmotic stress, protein phosphorylation, response to osmotic stress, primary root development, intracellular signal transduction, response to osmotic stress, response to osmotic stress, protein phosphorylation, response to salt stress, protein phosphorylation, protein phosphorylation, protein phosphorylation, response to salt stress, protein phosphorylation, protein phosphorylation, protein phosphorylation, response to osmotic stress, response to osmotic stress, response to salt stress
Cellular Component   located in   membrane, membrane, plasma membrane, cytosol, cytosol, extracellular region, plasma membrane
Molecular Function   enables   protein binding, protein kinase activity, protein binding, phosphatidic acid binding, protein binding, protein kinase activity, protein binding, protein binding, protein serine/threonine kinase activity, phosphatidic acid binding, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, kinase activity, protein kinase activity
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
T/A 48405305 synonymous_variant p.Thr240Thr
A/G 48405311 synonymous_variant p.Asn238Asn
T/C 48405449 downstream_gene_variant
T/A 48405500 intron_variant
T/C 48405715 intron_variant
A/G 48405766 intron_variant
T/C 48406082 intron_variant
T/A 48406138 intron_variant
C/A 48406193 missense_variant p.Asp133Tyr
T/A 48406442 missense_variant p.Asn86Tyr
C/A 48406532 intron_variant
A/G 48406646 intron_variant
G/A 48406727 intron_variant
A/T 48406732 intron_variant
T/C 48406824 synonymous_variant p.Ala50Ala
A/C 48407012 intron_variant
C/T 48407321 intron_variant
T/A 48407514 intron_variant
C/A 48407522 intron_variant
T/A 48407525 intron_variant
A/T 48407537 intron_variant
C/G 48407556 intron_variant
A/G 48407801 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03541.1
MEKYELVEENVGNGKVAVVKLMRHRETKEHVAVKFIPRDLTVALTPTHLALVMEYAAGGELFYQVLYQGKIKEDKEICHRDLKLENTLLDGSPANRLKICDFGYSKSNLLHSRTHSMVGTPAYIAPEIISGKDYDGKLADVWSCGVILYTMLVGTLPFEDNSDRQNLKKMVQRVSAVQYEFPDNVLSEDSKNLISRIFVANPSKRITMKEIKSHPWFLKNLPEELKEGAHCVHHNEENTTNCVQSVEEIMNIVNEAKTRPVACSPNL*


CDS Sequence:
>Vu_03541.1
ATGGAGAAGTACGAGTTGGTAGAAGAGAACGTAGGGAATGGAAAAGTAGCAGTGGTGAAACTTATGCGTCACAGAGAGACCAAAGAACATGTTGCTGTAAAATTCATCCCACGGGACCTTACGGTAGCTCTGACTCCAACACATCTTGCATTAGTTATGGAGTATGCAGCTGGTGGAGAATTGTTTTACCAAGTTCTTTACCAAGGAAAAATCAAAGAAGACAAAGAAATATGTCATCGAGACTTGAAGTTGGAGAATACCTTGTTGGATGGAAGTCCTGCAAATCGTCTTAAAATTTGTGATTTTGGCTATTCTAAGTCAAATCTACTTCATTCGAGGACTCATTCAATGGTAGGAACTCCAGCCTATATTGCACCAGAGATCATTTCTGGGAAAGATTATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTAATTCTTTATACAATGCTTGTAGGAACATTGCCATTTGAGGACAATAGTGATCGTCAAAATCTCAAAAAAATGGTTCAGAGAGTTTCGGCTGTTCAATACGAGTTCCCAGACAATGTTTTAAGCGAAGACAGCAAAAATCTGATATCTCGTATTTTTGTGGCAAATCCATCAAAGAGAATCACCATGAAGGAAATCAAGTCACATCCATGGTTTTTGAAGAACTTGCCTGAGGAGTTAAAAGAAGGGGCTCACTGTGTCCACCACAATGAAGAAAATACAACAAATTGTGTTCAGAGTGTAGAAGAAATCATGAACATTGTGAACGAAGCAAAAACCAGACCTGTTGCTTGCAGTCCAAATCTATAG


Promoter Sequence:
>Vu_03541::LG1:48408188-48410188(-)
TGCATTAAAGTAATTATGCATGTTTTATAAATGATTGGTTGCATGTTAGCTCACCCTACTTGTTTGTGTTTGTGTTTGGGTATGTGCGATGCTCGTATAATTCGTTATACGAGAGCAGATGAAGGAATGTCGTCTGACTCAGTGCCAAGGAAGGGAGAGATAGAAGAATAAAGTAGAAGAATTCGAGTTATATTTATGAATTTGTAGTTGAAATCTGAGTTTAAAACATATAGACATATATCAACTATAAATTTTCAAGTGTGAGATTATGAGATGTTACCTTAAATGTAATGTTTCAATATATAAATTATGAATTATCAAGTGTGAGATTTTGAGATGTTACAAAATTGATCCATCATATTATCATATGAATGATTTTGTTTATAAAAGTAAAATTATTTTGATTTATTCATTATTAAATTTAATTTTATATTTTTATTTTATCAATCTTGGAAAACAATTTTCTTTTTAATTTGTTTGTAAGATCTTGCATTGCTTTTTGGTAGGTCTCTCCCTACCACATAAGGAATAAAGTTTGTTAAGATTTCTTTAAATGATAAATGTTTACTCTAAAATATTAAATAACTTTTGTAGATTCTAAAATAACTTTTTCTTTAGTAGAAGTGGCTTTAAAATGTGGATTTTTTTTTATCATATTGAAGATTTAAAAAAATATATATATCTTTTAATATAAGATCTTATCATGTTTAAGATTGTTTTTTAAAAGACGTGTACAGTAAAATTTCCACAACCTTTATTCAATTCTAATTATATAAAGTCATTCTAACTACTTAATGCCTCAAAAGTCGTTTGGTTCCATAAATAAAAGAAAAATCTTAGATTCGTTTGTTTATTAGAAATGAATACGATATATTATATTTTTTTTTAAATATTTTTAACTTCTTAAGAAATAATTTTTTTTAATATTTAACTTAAAATATTGCCAAATTTGTTAATACTGTTGTCTAATCATAGATTCTTATGTATAATAAGATTTTTAATTTTGTTAACTATCTAAAATTACATCTAAGTTAATTTAATTATTTAATAATATTACAATATTTGCATTAACAGTGCATGAGAATTACATCTTATTTTCATTGTTCTACTTCATATACAACTTGTTATTTAGTATTTAAATAAACTATATATAATTTTCTCTAATCTATAATAATACAAATATTCTCATTTCGTTTATATAAATCTTATTTTACCTTTATTTATAATTTATAATAACTTTATATAAAATTAACGAGTTTCTCCAGAAAAATTTACGCGGTTTCAATCACATTCAAAACTACATATAATTTCAACTAGTAGCCGTTAAATGCCTCAAAAGTCATTTCCTTTAAAAAAATAAATTTAACCAATACAGATTGACAGTGTATAAGATTTTAAACATATATATATATATAGAGAGAGAGATGATTTTTAATGAAGTAATATTACTTTTTTTTATCAAAAGAAAAATAATTTTGAAAAATACGAATTACGTTAATTATTTATTAGAATTTGACTGATTGAATTATGTATGATATGATAGTATTACACTATTAGTTCTGATTTTTTCTAAAATAAGGATTGTAACATAATCATTCAGTAAATGATTAATTAAAATAAACCATAAGTTTTTCTTTAGATTTTCTCTTAAAAGTAACTAAATAGTCCAAGTATTAAATATTAAAAAACCCTTCAAATCAGTCCATAATTTTTACTAAAATACATAAAATAAAAATTACTACAAAATCAAATTGATTTTTTTTCAATTGATAGATTCTCATCTTGAATATACTAGTAATAAATAAATAACTAAACAGTTTAAAAATAATTATTTCTGGATTATATCCTATCTTTAATTATTTTGATAGTTTTATTTATCTTTATGATTTAGATGCTAAAATCTTATATCTTAAACATTTCTATTTATTTGTTAATTGATATCATAAATCTGAGTTAGATTGAAAAGTGTGAATTAGAAAGAGGAAGAGAGAAAGAAAGCA


Gene Sequence:
>Vu_03541(-)
ATGGAGAAGTACGAGTTGGTAGAAGAGAACGTAGGGAATGGAAAAGTAGCAGTGGTGAAACTTATGCGTCACAGAGAGACCAAAGAACATGTTGCTGTAAAATTCATCCCACGGGACCTTACGGTACACTCTCACTCCTGCACTTTTATTTTCTTTCACCAATCATCTTCCTTTTTTTATAATTTAGGGTTTTGCAGTTTAATTCTATTATATGGAATCGATTTCGAACCCAGGATTGTTTAGTTTTTTTTTTAATAATTGTTTTCTTATAAAATGTTAAAAAATATATAATTTGGTTTTGTATAGGTTATTATAAAAAATTATGATTCTATTTCTAATTTAATATTTTTAAATTTGTTTACAATTATAATTTATACCTTTGGCAGATTGATGAAATGGTGGCAAGGGAAATCATAAACCATAGATCTCTTCGTCATCCCAATATTGTTCAGTTCAAAGAGGTATGATCCCCTTTAGTTGGAAAAGCTTTAATTACATGCTTTGATTTCTATTATTATAAATTAATTAATGTAATTATAGACACATATTTATTTAAATAAATAACACTATATTAAATAAAGTAAACTTATTATTATAGTTTATTAATTCCACAGTCATGAAAAATATGTATAGTTATATATAATGCATAATTATAATAAAGTAAGAGTAATTTCATATTGATATGATCATGGGTGTAAAATGAAACAAATATCAAACAAATGTTTTTCATCTCTGTCCATGAATCTCTTAATTTAAATAATAAATCAAAGTACGTACTCAATTAATGAAAAGTAATTTTAAAAAATAGTAATAAGATTACAAATTGTCCCAATTTAAAATTAAAGTTATGCTACTTAATTATACAACGTATTGATTTTAATTAATTTTATGTAAAAATTAATAATAGACAATATTAAACCATTTTATTTCCATCAATATTTGTATTTTAGGTTACTATAAAAGTAGAGAAAATACATTGAAGAGCATATTTAGTTTTTCAATAGGTGATAATTAGCCCATTAACCACTCTTTCTTGATACCATACTACATTATTATGTTCCAATGGCTTGCTTAATGAAAAACAATTTTGCTGATTTTTATAATAGGTATTTTTAAAATGATATTTTTTAGATGGACAATATTAATTACTAGTATTTGTTAATGTAGAAATTGAATTCACAATCTCTTTCATCATCTCTTTTTAAACCAATCAAATCAACCTTATATATTCTTAGATGTTAGCGAAAGTTGAACTCAAAATCTCTCTGCTTTTCCTTCCAACTTTATCACTTGTTTCAGTAATGCATAAAAATAAGAAGTGGTGTTTGAAGTTTGCAGGTAGCTCTGACTCCAACACATCTTGCATTAGTTATGGAGTATGCAGCTGGTGGAGAATTGTTTTACCAAGTTCTTTACCAAGGAAAAATCAAAGAAGACAAAGTATGTTATTTTTCTTTTGTTCATTATATGGAACTTAAATCAAGTTGTATTATCAGTGCAGTGAACATGTTTAATGATTCAAAGAGTTTATTCAAACATTATTCAATTTGTTCTGATTCTTCTAATATTTCAGGCTCGATATTTCTTCCAGCAGTTGATTGCAGGAGTTAGTTACTGCCACGACATGGTATATGAAATGCATATTAATCTGAGAATGGATTGCTTTGTTTTCAGTGTGTTAGTAGCAATATGATTTTATTTTACCTTCTTTTGTAGGAAATATGTCATCGAGACTTGAAGTTGGAGAATACCTTGTTGGATGGAAGTCCTGCAAATCGTCTTAAAATTTGTGATTTTGGCTATTCTAAGGTTGGATCATGAAGTTCGTGTATACAACATTGAATGCTTTAAACACAGAATTGATTAAATGCAGTGTTAGATACTAATTTCTGGTTCTGATAATGTTTAATTTTGTAGTCAAATCTACTTCATTCGAGGACTCATTCAATGGTAGGAACTCCAGCCTATATTGCACCAGAGATCATTTCTGGGAAAGATTATGATGGAAAGGTAATAAGAGCTTCTAACATTAGATCATGAAAAAGAATAAAAGATTCATGTTCAGCCGTCATTTATTTAAATTACAATGTGAAGTATGAAGCACTTAATGCATCAGAGTTAACGAGGTTTCTTGTATTATATGGTAGTTCTGTTCAGTTTTTGGCTAATGTGTTGTTTTCTACTTGTTCAGTTGGCAGATGTATGGTCCTGTGGAGTAATTCTTTATACAATGCTTGTAGGAACATTGCCATTTGAGGACAATAGTGATCGTCAAAATCTCAAAAAAATGGTTCAGGTAATTTCCTTTATTTTTTCAGTTTAATTCTCATGTACAATTGTAAAAATTTTATGTTAAAAATTTATGTACAAGTCTAAATTACACATTTGATTAGATTCATGTTTGATTGATATTGTTTTTCTCTGATGATATCCATCACTTTTTATACACATTTTGTGATTGAAAACTGGTGTAAAATTTTTAATATGTTTACATTAATGTTTTATAATGATCTTTGCTGATAGATTCACCATGTTTTATGTCCATATTCTTTATGATTTTCTATGTATACTTTTACACAGAGAGTTTCGGCTGTTCAATACGAGTTCCCAGACAATGTTTTAAGCGAAGACAGCAAAAATCTGATATCTCGTATTTTTGTGGCAAATCCATCAAAGGTATGTATATGAACATGAACATAGTCATACATTTGTAAAGAAAAGAACACTGTTGCATGATAAACGTACGTTGTAACTTTGCTTTATAATTATGTTATAGAGAATCACCATGAAGGAAATCAAGTCACATCCATGGTTTTTGAAGAACTTGCCTGAGGAGTTAAAAGAAGGGGCTCACTGTGTCCACCACAATGAAGAAAATACAACAAATTGTGTTCAGAGTGTAGAAGAAATCATGAACATTGTGAACGAAGCAAAAACCAGACCTGTTGCTTGCAGTCCAAATCTATAG