Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03851 LG1 52155500 52159561 PREDICTED: putative serine/threonine-protein kinase
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to fungus, defense response to bacterium, phosphorylation, small molecule metabolic process, signal transduction, secondary metabolic process, defense response to fungus, response to osmotic stress, defense response to bacterium, defense response to bacterium, protein phosphorylation, phyllome development, defense response to fungus, protein phosphorylation, response to osmotic stress, response to molecule of bacterial origin, response to alcohol, response to water deprivation, response to molecule of bacterial origin, glycosyl compound metabolic process, response to chitin, protein phosphorylation, response to water deprivation, response to organic cyclic compound, response to molecule of bacterial origin, protein phosphorylation, protein phosphorylation, phyllome development, protein phosphorylation, response to water deprivation, phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   cytoplasm, nucleus
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/T 52155787 downstream_gene_variant
T/A 52156234 downstream_gene_variant
C/A 52156247 downstream_gene_variant
G/A 52156311 downstream_gene_variant
T/G 52156533 downstream_gene_variant
C/A 52156630 downstream_gene_variant
G/A 52156824 downstream_gene_variant
G/A 52157207 synonymous_variant p.Leu105Leu
G/A 52157309 downstream_gene_variant
T/A 52157465 downstream_gene_variant
A/G 52157466 downstream_gene_variant
T/A 52157725 downstream_gene_variant
T/G 52157729 downstream_gene_variant
C/A 52157733 downstream_gene_variant
G/A 52157781 downstream_gene_variant
G/A 52157917 downstream_gene_variant
A/C 52158221 downstream_gene_variant
T/A 52158412 downstream_gene_variant
T/A 52158776 downstream_gene_variant
T/A 52159112 synonymous_variant p.Thr211Thr
G/T 52159114 missense_variant p.Gly212Val
C/A 52159123 missense_variant p.Pro215Gln
G/T 52159322 missense_variant p.Val247Leu
A/T 52159363 synonymous_variant p.Ala260Ala
C/T 52159411 synonymous_variant p.Ser276Ser
A/T 52159488 missense_variant p.Lys302Met

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03851.1
MSCGCFGASTLKKKRNPSHTPNEIDGFPLDNVKNFSDKDLRLATDNYHPSKKLGRGGFGTVYQGTLKNGRQVAVKTLSAGSKQGVREFLSEIKTISNVKHPNLVELVGCCVQETNRILVYEYVENNSLDRALIGQNIPRPEHYCSLVPPHMLYNINFYVYTQCSTIFTKNQEGHGYLAPEYAMGGQLTLKADVYSFGVLILEIISGKSSARTNWGGSNKFLLEWAWQLYENGKLLELVDPDMVEFPEEEVIRYMKVAFFCTQAAASRRPMMSQVLNMLSKNTRLNEKELTAPGFFQDSGTSSKKKSSFESTSYQFSSNPSSITQLAPR*


CDS Sequence:
>Vu_03851.1
ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAAGAAAAGAAATCCTTCTCATACTCCTAATGAGATTGATGGCTTTCCGCTTGATAATGTTAAGAATTTTTCTGATAAAGACCTGAGACTGGCCACTGATAACTATCATCCAAGCAAAAAGCTAGGACGAGGAGGTTTTGGAACTGTTTACCAGGGAACCTTAAAAAATGGAAGACAAGTAGCAGTGAAGACACTTTCTGCTGGGTCAAAGCAGGGAGTTCGTGAATTTTTATCTGAAATTAAAACTATATCAAATGTTAAACATCCAAACCTTGTTGAATTGGTTGGTTGCTGCGTTCAAGAAACTAATCGCATATTAGTGTATGAATATGTGGAAAATAACAGCCTTGATCGTGCATTAATTGGTCAAAACATTCCTAGACCTGAGCATTACTGCTCACTGGTTCCTCCACATATGCTCTACAACATCAACTTTTATGTTTATACTCAATGTTCTACAATTTTCACAAAGAACCAAGAAGGACATGGTTACTTAGCACCAGAATATGCAATGGGTGGCCAGTTAACCCTGAAGGCTGATGTATATAGTTTTGGTGTTCTTATTCTTGAAATAATCAGTGGCAAAAGCAGTGCAAGGACAAACTGGGGAGGGTCCAACAAATTCCTCTTGGAATGGGCCTGGCAACTGTATGAAAATGGGAAACTATTGGAACTTGTGGATCCAGACATGGTTGAATTCCCTGAGGAAGAGGTAATTAGGTACATGAAGGTTGCTTTTTTCTGCACACAAGCAGCAGCAAGTAGAAGGCCAATGATGTCCCAAGTTCTGAATATGCTGTCCAAGAACACGAGGCTGAATGAAAAGGAACTAACTGCACCAGGGTTTTTCCAGGATTCAGGAACATCTTCTAAGAAGAAGTCATCCTTTGAATCCACCAGCTATCAATTTAGCTCTAACCCTTCCAGTATTACTCAGTTGGCCCCACGTTGA


Promoter Sequence:
>Vu_03851::LG1:52153500-52155500(+)
TAATAGAGTATTTAACAGCTAGTTAGTTAAGACTGCTTTGTCTTCATTTACGTAACTAACATACAAAATCTTGCTAATCATTACCTTGTTAAAAGAAAAAGAACAGAATAAGAAATGTGAAATCGTATAACAATTTAAATAATTTCAAAGAGTTGACAGAGTTTGGTCAAATAAACTAAGATAAGATTTCATATGTTTGACATGTAACAAGTTTCGAGTATCCGCTTTGGGAATGCAAGTTTTGAGTCTATAACCCTTTTAAAAGTTAAGACCTGTTAATAATTTTCTTTACGGGACTTACTAAAAACTTTTTTTCTCAATCATTAAATTAATTTATATATATGATTCAATTGGGACAGACGTTTTCAAATTAACTTGTCTAAAACCCTATTTTTAATTTATATATACAAACTCATTTTTTCTTGACAAATCTTGTTTTATTATCACTATTTATAAAACAAAAAAAAATAATGTTACTTAATTAGCCATATAGTTTAGTTGAATAAGATTGAGCTTTTTAGTTCTTTTGTTTTTTTTTAAAAATAAAATACACCTATTTAACTACCCACTTTCATGATATATTTTTTTGTCAATATCTATGTTACTTTTAATTTTATAATAGTAATACTCTTAACTACAATGATTAAAAGAGGATAAAATAGTAGCATGGCAATAAAAAGAATAACTTTTAAATTAGAAAGTAAATAAACAAGTTTGTATGACTGTAAATACTACCCAATAGGAAAGCATTATGTAATGAGACAAATTTTCTTCCATAACTCAAAACCAAAAGGTTAAAACGTGAAAAAGTAAACACTAAGAATGATGAAAAAGTCATGCAAATAAATGTTAGAGGATACTAATTTAAGAACCTTAATTAGATTATTGAGTTAAGCATTTTGAACAAACATAACACATGACATGGAGAAATCCTTAAAAAAGGACCACATAGAATACTAGAAGGAATGCATTGAGGAACACATTTATTTGGATGCAAAGAAAGAAAGAGTGATTGGTGTTAGTTGGAGACAGTCTTTGGCAGCCTGGTGGAACCGAAAGAAGAAACGGTCATTTGTGTGCACGGAGTTGGACCAAAGCAAGTGAGAATACAATACAAAACAACACAACAACGCAACCATGAAAAGAAAAGAAACACGAACACACAAACGCGCATTACTCGCTATAGCCGCAAGACCAAGCACACAACATAAACCACTTCTTTTTAATACCATTCTTTCCCCTCCATCTTTTTAATTTTCAACTCCTTCCTATTTAGCTACCTAACTCTCCTTAGACTTGAGCATTTTCTCTTGGCTCCCAAAGGTGATCATACTTTTTCTTTTACTTTTCTCCCTTGTTTCCCAAAAGGGGTTCTTGTCCCAAATGGAGTTCCTGTCTTTTACATGTTAAAGGTGCAGTCTTTCTCGATGATAAGCTGAATGCTCAAATCAGATTGCGATTATGAGCTGATCTGGAAATGGGGTTTTATCTTGGGAGTTCATTCTCTCTTCTGTTTTTTTCTTCTTTTTTGGTTTGGTGAAATTGGAAAAATTTTTCAAACTTGGAATTATCCTTCAGTATGGTTCGGTGTTTTTTTTTTGTCTGTATAGAGTCGTCTGAAGGGTCTAAGTTTGATCACCGATTCAGCAGAAAGAAATATAAGAATGGAACGATTGATATGAAAATTGAAACAATTGATTTTTATTGAAATTTCTGTTATTGAATCCATGCAATTCGGTTCGGTTTGTGAGAATTTTAATATTCCTATTCGTGATATTTACCAAGTTCAGCAATCGGTGTCAGGTTGTTGGACAAAGCCGTGAATCATTTCAGTTGAGCGTGTTATTTATTCTAGCTTGTTAAAGTGTGTGCTTGATTTCCATGCCTTTGCATTGCTATATCTATAGTTTTTGCAATTAAAATGTATAAATGGCACTTTTCACTTATGTTGAAATATGGTAAATAGTGCAGAGTGCAGCAGTCACATCCCAGGATCATTA


Gene Sequence:
>Vu_03851(+)
ATGAGTTGTGGCTGCTTTGGAGCCTCAACTCTCAAGAAGAAAAGAAATCCTTCTCATACTCCTAATGAGATTGATGGTGAGGGTGGTTGTTGATTATTTGTTTCGATATTCTGCAGCCTTTCAATAAGCTAGACACTATTGATTGCAAGTTTCCTGTTCCTTTTATTGGCTTTAGCTTTACCTATGAGCCTGCACTTTCTGACTGGAAATTTACCTTGATCATTAATGTATAGAACAGTGATATATTGAATATTGGTTCGACTTGAGTTTTATTAATCAAACCATCTCGCATAGTTGCGTTTTGGTCACTTGGTAGGCAGGTCTGACAAGAGTAACAGTTCGTTAAGTTGTAGACTTCAAAAGATAAATGTGTCCATTTAGTTCATACATAGGTCCAAATTAATCTCAGAAGTTGGAACACAAGCATAATTTGGGGATTTTTACTAGTTTGGTTGGTTTTGATGTGTGGTACAATAATGATGTTTAAAAGAGTTCTGGTATATATTTAGGAATACTTTTATAAGTACATTTTTTTTGTTTTTCCTATATTTATCACCATTTTGATTGTGATATACATATCTTTTGTTTCTCAGGCTTTCCGCTTGATAATGTTAAGAATTTTTCTGATAAAGACCTGAGACTGGCCACTGATAACTATCATCCAAGCAAAAAGCTAGGACGAGGAGGTTTTGGAACTGTTTACCAGGTATTTAAGTCACAGACTCTAATATAAGTTGTAACGTTATGCGAATTAATATGCCTGTTCATCAGTTGTAACATTACCCAAAAAATTCTTTCTGAGATGTCTGTGGTACAAGAGGGCTATTGTAATTTTCTCTTTTCACTTATATCTTTCTGTGATGTTGAAATAAGATTTCATTTGTTATACAAGGGCCAATCTTCTAGCAGCTGGGTATTATCCAAAGGAAGACATTACTAGATTGTTATTGTGGCAGTAAAACCATCATGACGTTCAAAACCCCATTTCCATGATCTAGATATTCATTACTATTCATGTGACTTGTATCTTATCTTGAACTCGCACACATGATCCAATGGAATTGTTTGCTCCTCTCACTTGACATGCTCCACTTACTATGGCACATTGCATCATATTTCTTTCTTGTACCCCTTTATTGACATCATAGAATCTTGCTTTCATGCTTTGTACTATGAGTTATAAGATTTGAGCACTGTCAACTTTCCCTGAGACAGTGAGAGAGGCTTTCTGATGTGGGTACAAACAATGCTTCTATTTTGTGCCTCAACATAAATAAATATTACTTTAGCATTACATCGTAAACCTTACCACTCTTTTTTATTTGCTAAAATCATAAAACTGAAGGATGTATAGAATTGGGTAGAAAAGAAATACTTTTTCTTCAGCTTACCCTTTCCCTCATCGGAAGCCTTATGAAACCTCCTTTGTCATAGAAAGACAAATTTACAATTTATGAGGGTTCTTTACTGGTTTAGCTTAGTTAAGCTGAGGAACCAAGAAATAATATCACATTTTTATTATTTTATTCTCCTCTTGGTTGTTAAGCCTGTACTAAATAGCCATGTTGAAATTTGCCAGGGAACCTTAAAAAATGGAAGACAAGTAGCAGTGAAGACACTTTCTGCTGGGTCAAAGCAGGGAGTTCGTGAATTTTTATCTGAAATTAAAACTATATCAAATGTTAAACATCCAAACCTTGTTGAATTGGTTGGTTGCTGCGTTCAAGAAACTAATCGCATATTAGTGTATGAATATGTGGAAAATAACAGCCTTGATCGTGCATTAATTGGTAAATTTCCAAATGCTTTGCTGTGAATTATGGAATCACTGATTGAAATCCATGTGCAGATGATAGAATGAAACGATAACCTTTTTTTTTCTTTTATTCTACTTTTTGTAGGTGCAAGAGGTTCAAATATCAGATTAGACTGGAGAAAAAGATCTGATATTTGCATGGGTACTGCTAGAGGTCTTGCATTTCTTCATGAAGAACTTGTGCCACACATTGTGCATAGAGACATCAAGGCAAGCAACATACTACTTGACAAACATTTCAAGCCAAAAATAGGAGATTTCGGGTTGGCTAAATTATTTCCAGATGACATCACTCACATTAGCACAAGGATTGCTGGAACAACGTATGTTGTATTTCAGATTCATGATTATATTTTATGTTTTTTAATTTTCTGTTGCATTGGAAGATTATCACCTAGTTTTCTTTCTCTCTGTTTGCTACTATCTAGTTTTCTGGAGATAATATTAATTAGTAAGATATTAGAAGTAGAAAAAACTCTTCATATTTGGTGATTCTTCACCAATCACCATCTGGCTATGACAGCAGAATTAGCAATGTTAGTGATAAAACTTCAGGGTCTATCAGGATATCTGAATTAATGTTTTCTGAACGTTACTAGGTGCCACTTTTTGTTATAGAATGTTCGTAAGTCAGTTGAATTTAGTTGCAGATGACTCAAACAATATTCAAGTGACACATGTTCTATAAAGTTAGTATCGATCTTGGATGCCTATGTTGTATTATTGACATCAGTCACTAAACTGAAAGCTGGAACTGGAAAAGAGAAGTACTAAATATTTTTAGTTGATTTCTCAATACAAGATCTAATCCGTGTTTAAAAGCTAAATTATTAAAGGAAGGATAGAAACTATGAATTGGCTAAACTTATTAAGGGAAATATGGAAAGTATGAATAGGCTAAACCTATTAAGGGTAAGACAAAAGATATGAAAAGTAAATCCTAATTATTATAAATAGACTTAATTATGTTTCTAGTTCTTGAAATTTAGGATAATTTTGATTTTGGTCATCCAAATTTAAAAAGTTCATTTTAGTCTTTCAAAATGGAAAAAATATGATTTCAGTCCTTAACACTAAATAAGAGACTAAAATGAATTTTTTTAAAACTGTTTTTAGTCTCTTAATTTAGTGTTTAGGGACTAAAAACATATTTCACTACATTTGAGAGACTTAAATTAGTTATTTTTTTTTAATTTGAGGGACTAAATAAGGATTTATCCCAACTTTCAGGGATTAAAAATATAATTAAACCTTATAAATATAATCTGAATATATACAAAGATTTTATCCTAACCTTACAGGATCTTGTATCTCAATAGATATGATCATGGAAAAATTTATTTGTAGTTTTTATGAAAAGTGAAGAGCTTCACAACCTCATTTGTTTGAATTAACTAAAACTTGGATGGTATTATTGGCAAGAAACTCTGATAGCATATCCAATTTCTTCACAGTTGTAATGAAAATGTAGGTCAAAACATTCCTAGACCTGAGCATTACTGCTCACTGGTTCCTCCACATATGCTCTACAACATCAACTTTTATGTTTATACTCAATGTTCTACAATTTTCACAAAGAACCAAGAAGGACAGTTAGATGCATTTTCAAAATTGTTCAACCTATACTTGGACAGTGGATCTGAATAGTGTTCTGACCTGCTTTGGATTGAAAATGCAGTGGTTACTTAGCACCAGAATATGCAATGGGTGGCCAGTTAACCCTGAAGGCTGATGTATATAGTTTTGGTGTTCTTATTCTTGAAATAATCAGTGGCAAAAGCAGTGCAAGGACAAACTGGGGAGGGTCCAACAAATTCCTCTTGGAATGGGTGTGTATATTTCATCTTCCCACATATATGCAACTTATGTGTTCATTCTTCTCAATGTGACTTGGTGTGGACTTAATGATATTTATTTTTGCAACAACACAGGCCTGGCAACTGTATGAAAATGGGAAACTATTGGAACTTGTGGATCCAGACATGGTTGAATTCCCTGAGGAAGAGGTAATTAGGTACATGAAGGTTGCTTTTTTCTGCACACAAGCAGCAGCAAGTAGAAGGCCAATGATGTCCCAAGTTCTGAATATGCTGTCCAAGAACACGAGGCTGAATGAAAAGGAACTAACTGCACCAGGGTTTTTCCAGGATTCAGGAACATCTTCTAAGAAGAAGTCATCCTTTGAATCCACCAGCTATCAATTTAGCTCTAACCCTTCCAGTATTACTCAGTTGGCCCCACGTTGA