Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03925 LG1 53231639 53235313 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   innate immune response, recognition of pollen, recognition of pollen, protein phosphorylation, protein phosphorylation, innate immune response, protein phosphorylation, protein phosphorylation, recognition of pollen, innate immune response, recognition of pollen, protein phosphorylation, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   extracellular region
Molecular Function   enables   protein serine/threonine kinase activity, calmodulin binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/A 53231946 missense_variant p.Gly103Asp
A/T 53232150 missense_variant p.Asn171Ile
A/T 53232157 synonymous_variant p.Gly173Gly
G/A 53232436 synonymous_variant p.Lys266Lys
A/G 53232654 missense_variant p.Glu339Gly
G/T 53232655 missense_variant p.Glu339Asp
A/T 53232709 missense_variant p.Lys357Asn
G/T 53233725 missense_variant p.Arg535Met
T/C 53233769 intron_variant
C/T 53233914 intron_variant
A/G 53234229 intron_variant
G/A 53234237 intron_variant
G/A 53234522 intron_variant
C/A 53234534 intron_variant
A/T 53234541 intron_variant
G/A 53234655 synonymous_variant p.Val616Val
C/A 53234754 intron_variant
C/G 53234763 intron_variant
G/A 53235313 splice_region_variant&stop_retained_variant p.Ter744Ter

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03925.1
MGMITAPKYTNFLLLLFFLCFHASFSHAVNSLTGEQEIRDNNGDDNLVSEDLSFQMGFFGFDNSSRYVGIWYRKFPSPATAFIWVANREKPIMGRGGSIKIKGDGNLVVFDGENNEVWSTNKSISTRNTTAVLGDDGNLVLSEESEHEKKVWQSFENPTDTFVPGMSLPINAGTSMFRSWKSATDPSPGNYSMGVDSGGSTIQILILEGEKRRWRTGYWDGRVFTGVSNMTGSSLFGFKLNGNHFTYTWNETEKVRFQITWDGFEKKFISNEDETQWNNTQHEPYNNCEHYNFCGNFAVCDISKASVCSCLHGFQQGELSEWNDGNSGGCKRRTPLKAERNSSGTEVTVGDDGFSVKRCTKLPDFARLESPSNDEECKRFCLQNSSCTAYSYTIGIGCMIWYVDLVDVQHTENDIGSVLNIRLADSELEANDGEKKSKTWIIIIIITVVVGLICLGISVLLVWRFKRKREASPASANNIGEFSIIDPTRSTDLSTEFSGSTDLGLEGNKAELPFFTLSFLAAATDNFSEKNKLGQGGFGPVYKDSRLRIIHRDLKASNILLDESMHPKISDFGLARIFGGNQNEASTNRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIMSGRRNTSFRNTEDSSLIGYAWHMWSEQRVMELLDSSIGDSTPKSKALRFIHIAMLCVQDSASRRPNMASVLLMLASEDTTLPLPKQPLVTASMRKFDDGDQSYSEGLDVSNDLTVTMVTGR*


CDS Sequence:
>Vu_03925.1
ATGGGCATGATCACTGCACCCAAATATACAAACTTTCTTCTCCTTCTCTTCTTTCTCTGTTTTCATGCCTCGTTCTCTCATGCTGTCAATTCCCTGACAGGAGAGCAAGAAATCAGAGACAACAATGGTGATGACAACTTGGTGTCAGAAGACCTCAGCTTTCAAATGGGTTTCTTCGGTTTTGATAACTCTTCAAGGTACGTTGGGATTTGGTACCGCAAGTTTCCTAGTCCGGCTACGGCATTCATATGGGTAGCAAATAGAGAGAAACCCATCATGGGAAGAGGAGGTTCGATCAAAATCAAAGGTGACGGAAACTTGGTTGTTTTCGATGGAGAGAACAACGAGGTGTGGTCAACTAACAAGTCTATATCGACTAGAAACACAACAGCTGTTCTTGGTGATGACGGGAACCTTGTTCTTTCAGAAGAATCAGAACATGAGAAAAAGGTGTGGCAAAGCTTTGAGAATCCAACTGATACCTTCGTGCCGGGTATGTCTCTACCAATTAATGCTGGAACGAGTATGTTCAGGTCGTGGAAATCAGCAACGGATCCTTCACCGGGAAACTACTCAATGGGGGTTGACTCTGGGGGATCAACCATACAGATTTTGATTTTGGAAGGGGAAAAAAGGAGGTGGAGAACTGGGTACTGGGATGGTAGAGTATTCACTGGTGTCTCTAATATGACAGGAAGCTCTCTTTTTGGTTTTAAACTTAATGGGAATCATTTTACATATACATGGAATGAAACTGAAAAGGTGAGGTTTCAGATAACCTGGGATGGGTTTGAAAAGAAGTTTATATCGAATGAAGATGAGACACAATGGAATAATACACAACACGAGCCTTATAATAATTGTGAGCATTATAATTTTTGTGGCAATTTTGCAGTGTGTGATATCTCTAAGGCATCTGTTTGTAGTTGCTTGCACGGGTTTCAACAAGGGGAATTGAGTGAGTGGAATGATGGAAATTCAGGGGGTTGTAAGAGGAGGACTCCACTGAAGGCTGAGAGAAATAGTTCTGGAACTGAGGTTACTGTTGGTGATGATGGTTTCTCCGTTAAAAGATGTACAAAGTTGCCAGATTTTGCACGTCTGGAGAGTCCTTCTAACGATGAGGAATGCAAGCGGTTTTGTCTGCAGAATAGTTCTTGTACTGCGTATTCATATACAATTGGAATTGGGTGCATGATTTGGTATGTGGACTTGGTCGATGTTCAACACACTGAAAATGATATTGGAAGTGTACTCAACATCCGTCTTGCTGATTCTGAGTTAGAAGCAAACGATGGAGAGAAAAAGTCCAAAACATGGATAATAATAATAATAATAACTGTTGTGGTGGGGCTCATCTGCCTTGGGATCTCTGTATTGCTGGTATGGAGGTTTAAGAGAAAACGTGAAGCTTCCCCGGCTTCGGCTAACAACATTGGTGAGTTTTCGATCATTGATCCAACGAGGAGTACAGATTTATCGACAGAATTTTCAGGATCAACTGACTTAGGTTTGGAAGGGAATAAGGCAGAGCTTCCATTCTTCACTTTGAGCTTCCTTGCAGCAGCAACAGACAATTTCTCCGAAAAAAATAAGCTGGGACAAGGGGGATTTGGTCCTGTATACAAGGATTCAAGACTACGAATAATTCATCGGGATCTTAAAGCAAGCAACATTTTATTAGATGAAAGCATGCATCCAAAAATTTCAGACTTTGGCTTAGCCAGAATATTTGGAGGAAACCAAAATGAAGCAAGCACAAACAGAGTGGTTGGTACATATGGCTATATGTCGCCGGAATATGCAATGGAAGGTCTCTTTTCAGTTAAATCTGACGTCTATAGTTTTGGTGTACTGCTACTAGAGATTATGAGTGGCCGCAGGAACACTAGCTTTCGCAACACAGAAGATTCAAGTCTCATAGGATATGCCTGGCACATGTGGAGTGAGCAGAGAGTAATGGAACTTCTTGATTCTTCCATTGGTGATTCAACTCCAAAGAGTAAAGCATTGAGATTCATACACATAGCAATGTTATGTGTGCAAGACTCAGCATCTCGCAGACCAAACATGGCCTCTGTATTGTTAATGCTGGCAAGTGAAGACACAACTCTTCCTCTGCCTAAACAACCTTTGGTCACTGCTTCCATGAGGAAATTTGATGATGGAGATCAATCTTATAGCGAAGGCCTTGACGTGTCAAACGATTTGACAGTTACAATGGTGACAGGGAGATAG


Promoter Sequence:
>Vu_03925::LG1:53229639-53231639(+)
AAAAATACTCACCATAACCAAACTCCTACAATCACTTATTCAGCCAAAAAGATGGCCTCCTACACATTTATAAAAAACACCCACTTGGTAGTAGTATATTTATCTTTTGTTACCCCAAAAGAAAGAAACAATAGGAAATTGGAAAGAATGCAAAAAGAAAAAAAAAGTTGGAATTTTTAATTTAAACTAGACTATTTAAAAAAATGTCATGATTTTTTTTGTCGTTCTTTTTAAAATTGGATATAAACTGTGTGACATGAAATATAATTTTGTAATAGTAAGAAAAATTATAAGACTAATAATAATTTTAGAGTGATAAGTTGGATTGAGTTTGGTTCATAGAATTTCAAAGTAACAATGTGTTACAAAACCTAATCTGACGTAGAAACCATTGAATAACCCAACTTACTTGGTAATTGAGGAGTCCATTTTGAATGTGCAGATTTTTCCCATTCCGTGTAGCATTTTTCTTCTGCTTACAGTTGAAAAATCCATCATGATGCGCTTCTACGGAAGAAAATATTCCAAGGCTCGTGGGTTCCTGGAGTCTTCTTTCCTTTTTCAGCGCAGGCTCTTAAAGTCAATATATTTACTCATAAGAAAATTGGTATAATTCTGTATAATTTGTTCATATATGAGAAAAAACAATATTTAATTGAGAAGGTACACCTGTTACCATGAATATTTCCATCTTCAAAGTTTTTCAACTTCTTATTCATTAACTAACCACCACCACGTGTTTGTTTTAATGTTTTTAACCTTTCCAAACCAGTAATACTTACACAACCAATTCAATCTTCTTCATTCCAACTCCCACTTCACTCTCTCCACTCATTTTTCATACCACTCATTTCATTTCAACCTTCTTCGTTTATTCTATATTATTAAATCACAAAAAAAGAAAGTTAAAATTTAAGAGGTAATAATATACTAATTTACGAGTAGTTTCTCAATTTAATTCTTAAACTTAAAACCTTATTAAACTGAATCCTATAACTATTATAGATTTGCTTTCTATCACCAATATTTATTTTACACATTTTTAATTTAATCTTTATAAGTAAGATATTTTAACTTTGATCCATATATTATAGATTTTTTTTTTTAATTTGGTCTCTTACCACAGGAAAGACCAGTTTAAGAACTCACTTCAATCAAATTAAAAATATATTATCTGATAAAATTAAAAACTTGTTACATAAACGTAAACTTAACCGTGCATCATACAAGTGAAAAGGATCACACAAAAACTGTTTTAAATTTATAACTATAAGGGATTAAATAGTTTGCACCTTTAACTAAAACAATATAATATTTGAATACATAGAACAAAAATATTGATTATTGTTTGAAACGTAACTTCTGACACCTTCGCAATGAAAATCACGTTTTTATCTTTATTTTTATTCCAATTGTTTGAAGTATTATTTGATATTTAAGTCAGCATAAGATAATCAAAGCAATAATATTAAATACATAATAATGCGATCATCTTCTTCCTCTATATTTATAGTTTTCAGAACTTCATCTATATTTATAGTTTTCTGAGTTTGAGATTTAGTGACACTTTAATGTCAGTCTAATCTTAATTTATTATCCCTAATTATTATTTATCTTAATTAATTATTGTAGGAAAAACTTATCTTGCTTCCCTTATTGCTGGAGTCCTTCAGTGTTATTTGTGGAAATCCAAATGTCTAACCCCTGTTTAGCTGTTTCTTATCCTCGAGGAACATCTAACCTATGTGATACACATTACCAAACCTCCGGACTCTACGGTACAATTATTAATTATGATTGAGTTCAAAGAATAAAAAGAAAACGTTGGTAGTGTTCATCATGTGGCTAAAGTGGTCAAATGTATGTCAACGTGACACCTACTTGGTCAGAGAAGAGGAGCCATTGAACCTTCTTCTTTATATTTATTATTTACTCATTTCTCATCATTCTTATGCCTCATCACACCAAACCACGTAATCCTCTGTGTAATCTCAGGGACA


Gene Sequence:
>Vu_03925(+)
ATGGGCATGATCACTGCACCCAAATATACAAACTTTCTTCTCCTTCTCTTCTTTCTCTGTTTTCATGCCTCGTTCTCTCATGCTGTCAATTCCCTGACAGGAGAGCAAGAAATCAGAGACAACAATGGTGATGACAACTTGGTGTCAGAAGACCTCAGCTTTCAAATGGGTTTCTTCGGTTTTGATAACTCTTCAAGGTACGTTGGGATTTGGTACCGCAAGTTTCCTAGTCCGGCTACGGCATTCATATGGGTAGCAAATAGAGAGAAACCCATCATGGGAAGAGGAGGTTCGATCAAAATCAAAGGTGACGGAAACTTGGTTGTTTTCGATGGAGAGAACAACGAGGTGTGGTCAACTAACAAGTCTATATCGACTAGAAACACAACAGCTGTTCTTGGTGATGACGGGAACCTTGTTCTTTCAGAAGAATCAGAACATGAGAAAAAGGTGTGGCAAAGCTTTGAGAATCCAACTGATACCTTCGTGCCGGGTATGTCTCTACCAATTAATGCTGGAACGAGTATGTTCAGGTCGTGGAAATCAGCAACGGATCCTTCACCGGGAAACTACTCAATGGGGGTTGACTCTGGGGGATCAACCATACAGATTTTGATTTTGGAAGGGGAAAAAAGGAGGTGGAGAACTGGGTACTGGGATGGTAGAGTATTCACTGGTGTCTCTAATATGACAGGAAGCTCTCTTTTTGGTTTTAAACTTAATGGGAATCATTTTACATATACATGGAATGAAACTGAAAAGGTGAGGTTTCAGATAACCTGGGATGGGTTTGAAAAGAAGTTTATATCGAATGAAGATGAGACACAATGGAATAATACACAACACGAGCCTTATAATAATTGTGAGCATTATAATTTTTGTGGCAATTTTGCAGTGTGTGATATCTCTAAGGCATCTGTTTGTAGTTGCTTGCACGGGTTTCAACAAGGGGAATTGAGTGAGTGGAATGATGGAAATTCAGGGGGTTGTAAGAGGAGGACTCCACTGAAGGCTGAGAGAAATAGTTCTGGAACTGAGGTTACTGTTGGTGATGATGGTTTCTCCGTTAAAAGATGTACAAAGTTGCCAGATTTTGCACGTCTGGAGAGTCCTTCTAACGATGAGGAATGCAAGCGGTTTTGTCTGCAGAATAGTTCTTGTACTGCGTATTCATATACAATTGGAATTGGGTGCATGATTTGGTATGTGGACTTGGTCGATGTTCAACACACTGAAAATGATATTGGAAGTGTACTCAACATCCGTCTTGCTGATTCTGAGTTAGGTAAGATCTCGAGTAATTTGTCTTTCTTTTCATTGATCTTTTTTGTTTTGTTTTTAATCTTGATTTATAAATCCATTTTACATCTCACCTTACATGCTTTCTCGAGGAACTACTTGAATTTGTCATATTTCATGTCCAAACCAATCAAGTTTAGAAATCTTGTGCTTATAACATTCAATGCACAGGAAATTATTTGCTTAATGCGTTAGGTTAGAGATTTTCCCATATGGCATATAGGAGGAGGAACATCTGTTAGTTTGTTGTCTGTGAATATGATGAGATGGCAAATCACTTCAAATCCCATCCAAGCTCTCACAAGTTTCATTGATTTTCTGGTAGTATTTACAGCATATGATTTTTATGTTTTCAGAAGCAAACGATGGAGAGAAAAAGTCCAAAACATGGATAATAATAATAATAATAACTGTTGTGGTGGGGCTCATCTGCCTTGGGATCTCTGTATTGCTGGTATGGAGGTTTAAGAGAAAACGTGAAGGTAATATATTTATTTCCGTAAGAATTTTATTTTTTCATCCTTCAGATGAATGAATGACAAGGTATTACCAACAGTTTCTTATGTTATCTCTTCCTTTCCATTTGTCAACAGCTTCCCCGGCTTCGGCTAACAACATTGGTGAGTTTTCGATCATTGATCCAACGAGGAGTACAGATTTATCGACAGAATTTTCAGGATCAACTGACTTAGGTTTGGAAGGGAATAAGGCAGAGCTTCCATTCTTCACTTTGAGCTTCCTTGCAGCAGCAACAGACAATTTCTCCGAAAAAAATAAGCTGGGACAAGGGGGATTTGGTCCTGTATACAAGGTAAAATTTTAACTGTTAAGTTTACCTTAAGAATATCGTTTAGTGTACAACAAAAAGAGTGAGTGAGAAAAAGTATGTATGTGATGGAAAGACAAGAGAAAAAAAGGTGTTCCATAAACGCAAAACTCATTTCGTAATAAAAGGTTAATAGCTTCATTTATTCCACTGACCAGGGGAAGCTTCCAGGAGGAGAGGAAATAGCTGTTAAGAGGCTTTCAAGAAAGTCTAGTCAAGGATTAGAGGAGTTCAAGAATGAAATGATGCTAATAGCCAAACTACAACATAGAAATCTGGTTAGACTGCTTGGATGTTCAATTCAAGGAGAAGAAAAAATGCTGGTATACGAGTACTTGCCAAACAAAAGCTTGGACTGTTTTTTATTTGGTATGTTTCTTACCATTAACTGAGCATATTCCTTTTCTGCATCCTATTTCGGATAAGTTTGAAACAGAACCAACCAGTGCATGCATGATCTTAATAATTTGCTTGTTCTTGTAACATCATGGCAGATCCAGTGAAGAAAACACAACTAGACTGGACAAAGCGCTTTGAAATAATTGAAGGCATTGCAAGAGGGCTACTTTACCTGCACCAGGATTCAAGACTACGAATAATTCATCGGGATCTTAAAGCAAGCAACATTTTATTAGATGAAAGCATGCATCCAAAAATTTCAGACTTTGGCTTAGCCAGAATATTTGGAGGAAACCAAAATGAAGCAAGCACAAACAGAGTGGTTGGTACATAGTAAGTATGCTTTTATTTCACTTTTTGACAAAATCACTCTCTTCCATCTTATGTGAACCAGACTACTAATCTCTATATCTTTGATGCAGTGGCTATATGTCGCCGGAATATGCAATGGAAGGTCTCTTTTCAGTTAAATCTGACGTCTATAGTTTTGGTGTACTGCTACTAGAGATTATGAGTGGCCGCAGGAACACTAGCTTTCGCAACACAGAAGATTCAAGTCTCATAGGATATGTGAGTATAACTAAAACAACTCTCACAAAACTTCAAATTTAGTGAAAAAGTTTCTTTAAAGTTGAAATACATAAGGTATTTGTTTCCTTATTTTCCTTTGGTGTTCATGTTAGTAAGTTGCAAATTTATATCATTACTTGAAAAGTGCCCACCTCTAAGGAGTCTTGAGAAGTTACAAATTTATACAATGTTTGTGAAAGTAAAAGTACTTAAAATTCCTGGTTTATTGGAGTGGTGAAGGCTGATGGTTTATGATGAAAAAATGGATGCAGGCCTGGCACATGTGGAGTGAGCAGAGAGTAATGGAACTTCTTGATTCTTCCATTGGTGATTCAACTCCAAAGAGTAAAGCATTGAGATTCATACACATAGCAATGTTATGTGTGCAAGACTCAGCATCTCGCAGACCAAACATGGCCTCTGTATTGTTAATGCTGGCAAGTGAAGACACAACTCTTCCTCTGCCTAAACAACCTTTGGTCACTGCTTCCATGAGGAAATTTGATGATGGAGATCAATCTTATAGCGAAGGCCTTGACGTGTCAAACGATTTGACAGTTACAATGGTGACAGGGAGATAG