Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_03999 LG1 54297471 54298151 mitogen-activated protein kinase kinase kinase 17
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to ethylene stimulus, cellular lipid metabolic process, cellular response to jasmonic acid stimulus, cellular response to jasmonic acid stimulus, defense response to bacterium, phosphate-containing compound metabolic process, response to osmotic stress, defense response to bacterium, monocarboxylic acid metabolic process, hormone-mediated signaling pathway, organic acid biosynthetic process, response to abscisic acid, immune system process, hormone-mediated signaling pathway, phosphate-containing compound metabolic process, cellular response to ethylene stimulus, organic hydroxy compound metabolic process, response to organonitrogen compound, response to water deprivation, protein phosphorylation, response to wounding, response to water deprivation, cellular response to jasmonic acid stimulus, salicylic acid mediated signaling pathway, protein phosphorylation, response to water deprivation, regulation of cellular ketone metabolic process, hormone-mediated signaling pathway, cellular response to ethylene stimulus, secondary metabolic process, lipid biosynthetic process, cellular lipid metabolic process, defense response to fungus, leaf development, regulation of defense response, response to hypoxia, lipid biosynthetic process, regulation of cellular ketone metabolic process, salicylic acid mediated signaling pathway, response to hypoxia, protein phosphorylation, salicylic acid mediated signaling pathway, lipid biosynthetic process, leaf development, cellular lipid metabolic process, defense response to bacterium, defense response to fungus, defense response to fungus, hormone-mediated signaling pathway, carbohydrate derivative metabolic process, response to abscisic acid, monocarboxylic acid metabolic process, organic acid biosynthetic process, organic acid biosynthetic process, response to osmotic stress
Molecular Function   enables   protein kinase binding
SNP Position Effect Amino acid change
C/T 54297515 synonymous_variant p.Phe15Phe
C/T 54297533 synonymous_variant p.Asn21Asn
G/A 54297566 synonymous_variant p.Ala32Ala
C/A 54297581 synonymous_variant p.Thr37Thr
T/G 54297593 synonymous_variant p.Gly41Gly
G/A 54297651 missense_variant p.Val61Met
T/C 54297676 missense_variant p.Leu69Ser
C/T 54297731 synonymous_variant p.Pro87Pro
C/T 54297755 synonymous_variant p.Ser95Ser
C/T 54297823 missense_variant p.Ser118Leu
A/T 54297889 missense_variant p.Glu140Val
G/A 54297921 missense_variant p.Asp151Asn
G/A 54297932 synonymous_variant p.Ser154Ser
T/C 54297935 synonymous_variant p.Phe155Phe
C/T 54297952 missense_variant p.Pro161Leu
A/G 54297968 synonymous_variant p.Ser166Ser
C/A 54298028 synonymous_variant p.Ser186Ser
G/A,* 54298053 missense_variant p.Gly195Arg
C/A 54298083 missense_variant p.Gln205Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_03999.1
MEGLKHIHEQGFVHFDVKLQNVLVSDDEVKIADFGLTKEKGKKQGKCEFRGTSLFMSPKSVKNNEYEPLADIWALGCTVVEMVTGKPVWDVSNGSSIWSLIIRIGVGEELPKITEELSEEGKDFLEKCFVKDPKNKWSVEMLLKHPFIKVDSFSFEKVHQPLLSPSPRTHFDFPDWASTIMASLPSSLDSDEHSGWTSSPESRLQQLVTDKTPENWSGLDGWIGVR*


CDS Sequence:
>Vu_03999.1
ATGGAAGGGCTCAAACATATTCACGAGCAAGGTTTCGTTCACTTCGACGTGAAGCTTCAGAACGTTCTCGTTTCTGACGACGAGGTGAAAATCGCGGACTTTGGACTCACCAAGGAGAAGGGTAAGAAACAAGGGAAGTGTGAGTTCAGGGGAACATCGTTGTTTATGTCGCCAAAATCGGTGAAAAATAATGAATATGAGCCGTTAGCGGATATTTGGGCCTTGGGATGCACCGTCGTGGAGATGGTGACCGGAAAACCCGTGTGGGATGTTAGCAACGGTTCCAGTATTTGGTCATTGATTATTCGGATTGGAGTGGGAGAAGAATTGCCAAAGATTACAGAAGAATTGTCGGAAGAGGGGAAGGACTTTTTGGAGAAGTGCTTTGTTAAGGATCCCAAGAACAAGTGGAGCGTTGAGATGCTTCTGAAGCACCCTTTCATCAAAGTTGACTCATTTTCGTTTGAGAAAGTTCATCAACCGTTACTGTCGCCGTCACCGAGGACCCACTTCGATTTTCCTGACTGGGCTTCCACCATAATGGCTTCGCTCCCGTCCTCCCTAGATTCCGATGAGCACTCTGGGTGGACAAGTTCTCCGGAGAGTCGTCTCCAGCAGCTTGTCACTGATAAGACACCAGAGAATTGGTCAGGATTAGATGGCTGGATCGGCGTTAGGTGA


Promoter Sequence:
>Vu_03999::LG1:54295471-54297471(+)
GTATTTGAGTTGTTTATACCATTTGACACATTTTCGCTTCGATGTTAATTGAGAAATGCATTTTAAACATCAAATAGACTTAAATAAATTTGGTAAAAGGACTAAATCAATACAATTCTAAAGATGGGAGACTAAGTTAGTCCAAAGTTTCAAAGATGGACTAAATCCAATTTTCATTGAAAGTTAAGGGACTAAAAGCATATTAAACCCAAATTCTAATTAGGAATATTGAGATGCACTTGCCAGACTTATTAGATATTTAAGAGGTTTAATAAATTATGTCATTGAATATAGTGGATTTCCCGTTGTACTAAAATAGTATAATAATGTTATATGGATCTCTAATTTAGATGAGACAAAATCCACTAATGGTTATGTATTCACAATTAATAGTGGTGCAATTACATGGAGACCAGCCAGGTAAACTATTATTGTAAGATCAACATTGGAATTTGAATTTGTTGCTCTAGAAATGGCTGGTAGTGAAGTTGAGTTGTTGACGAACTTCTTAGCTAACATTCCACTAAGAATAAAACCAACTTCTTTTATGTCAATACATTGTGATTGTCAATCGGAAAAAACTATAGCCAAAAACAAAAACCATAATGGAAATAATAGACATATACCATTAAGATATAATTTGATGAAGTTGCTAAAGAGTGGAACAATTTCCATTGATTATGTGAAGTCAGAACAGAGTTTAGCAGATCCTCTAAAAAAATCCTAGGAAGTGATGTGATGTGATTTTAGAAACATCTAGAGGAATGAGACTTAAGCCAATTGCAAATAAACAAGTGATGATAACCCAACCTTTGTGTTTAGAGATCCTAGGAATAAGGTTCATATGAGTTAGAGTAAGTCACTCGTTAGTTCTGATAGCATTAAATTGATTTTTAATCAATTATGCCCATTCTTATGATGTGTGTGAAAGTGCTAGAGATTGCATTATTGAGAGGTTAAATTTTTTAATTAAAATTCTATATGGTGTAATAATTTTAGTTAAACAAAGTTTTTAATGATTTTTTATATCCCTTACATGTGGTGTATGATTTGCAACATACACTTGCTGAAATCACCTATACGAGTGTTGAGTGGAGCCGCTTGGATGAGATATTGACATTATCTCTAGACTACTCATGAATAACGAGCACACACATTGCCTAGTAAGCATAACACATCGATAACAACAAGGATTGTAGGGTGTATTGTTGTTGATAAACCACTAAAAAATGTCAACTGTCTTTAGTTTATATATAGCTTACTAAGTTTCTTGATCTAAGATTGGTTTATATAACTTGCTATATCATCTCTCATACATTATATCTTATATGAGACCCATAATTTTCTTCTTTCACACTTTTCATAACTTATCTTTGGCAATATATGGGGGTATTGTTATTGATAATCAATATATTTTATAAAGTATATAGCTTGTGTTGGTCGATCTCGTGTTAGTTGAGCTCATGTTGGTCGAGATTGTGTTGGTCAAACTCGTGTTGGTCAATATTGTGTTGGCCAAGCTTGTTGCTATAAACTTTTTGTTTGACGACCCCTCTTTCTTTTTCGACGTCTCAATTGAATTCTTACTTTTATAAAATTGAATCAAATAAAGGCTTTCCGTTAAATTGATCAAATGCAGTTAAGGAGGGTGTTAGGTAGCATGCTGACAGTGTAGTTTTTTATTACGTGGCATTAAAAACGTGACTGAATTATATTTTTTTAATTTTTGAATTAAAAAATGAAGTGTACATAATGGAAACAAGTTTTTAAGTAAGGGAAAAGTTGGAAATGAAATAAAATTAAGTACTGAAAGCCCCATTGTCCTTTGCAATTGCGAAATTGAAATGAAATTGGGAAAGTTGAGGTTTAGGATTCGTGGGAGAAAACAAAAGTGCGATCTTCTTTCGAACGCGCTACTGAAGGGTTCCTCGGCGACCAGGTCAAGAAACACGGTGGAAGCCTCCCGGAGCCTTTCGTCCGGCGATGCACGAGGTCTATCA


Gene Sequence:
>Vu_03999(+)
ATGGAAGGGCTCAAACATATTCACGAGCAAGGTTTCGTTCACTTCGACGTGAAGCTTCAGAACGTTCTCGTTTCTGACGACGAGGTGAAAATCGCGGACTTTGGACTCACCAAGGAGAAGGGTAAGAAACAAGGGAAGTGTGAGTTCAGGGGAACATCGTTGTTTATGTCGCCAAAATCGGTGAAAAATAATGAATATGAGCCGTTAGCGGATATTTGGGCCTTGGGATGCACCGTCGTGGAGATGGTGACCGGAAAACCCGTGTGGGATGTTAGCAACGGTTCCAGTATTTGGTCATTGATTATTCGGATTGGAGTGGGAGAAGAATTGCCAAAGATTACAGAAGAATTGTCGGAAGAGGGGAAGGACTTTTTGGAGAAGTGCTTTGTTAAGGATCCCAAGAACAAGTGGAGCGTTGAGATGCTTCTGAAGCACCCTTTCATCAAAGTTGACTCATTTTCGTTTGAGAAAGTTCATCAACCGTTACTGTCGCCGTCACCGAGGACCCACTTCGATTTTCCTGACTGGGCTTCCACCATAATGGCTTCGCTCCCGTCCTCCCTAGATTCCGATGAGCACTCTGGGTGGACAAGTTCTCCGGAGAGTCGTCTCCAGCAGCTTGTCACTGATAAGACACCAGAGAATTGGTCAGGATTAGATGGCTGGATCGGCGTTAGGTGA