Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04351 LG1 60043034 60043982 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   stomatal complex morphogenesis, protein phosphorylation, protein phosphorylation, stomatal complex morphogenesis, stomatal complex morphogenesis, stomatal complex morphogenesis, stomatal complex morphogenesis, stomatal complex morphogenesis, microtubule cytoskeleton organization, microtubule cytoskeleton organization, protein phosphorylation
Cellular Component   is active in   cellular_component
Cellular Component   located in   cell plate, plasma membrane, plasma membrane
Molecular Function   enables   protein kinase activity, protein kinase activity, ATP binding, kinase activity, protein kinase activity, ATP binding, kinase activity
SNP Position Effect Amino acid change
T/C 60043041 missense_variant p.Leu3Pro
T/C 60043043 missense_variant p.Ser4Pro
A/G 60043058 missense_variant p.Asn9Asp
C/T 60043091 missense_variant p.Pro20Ser
C/A 60043149 missense_variant p.Ala39Glu
C/T 60043164 missense_variant p.Ser44Leu
A/G 60043185 missense_variant p.Gln51Arg
T/C 60043200 missense_variant p.Val56Ala
C/T 60043241 missense_variant p.Pro70Ser
A/G 60043270 synonymous_variant p.Thr79Thr
A/G 60043308 upstream_gene_variant
A/G 60043310 upstream_gene_variant
C/T 60043347 upstream_gene_variant
A/T 60043382 upstream_gene_variant
C/G,A 60043385 upstream_gene_variant
C/A 60043440 upstream_gene_variant
A/G 60043442 upstream_gene_variant
G/A 60043450 upstream_gene_variant
T/C 60043481 upstream_gene_variant
T/C 60043486 upstream_gene_variant
T/C 60043490 upstream_gene_variant
T/C 60043587 stop_lost p.Ter93Glnext*?
C/T 60043657 upstream_gene_variant
C/T 60043682 upstream_gene_variant
G/A 60043687 upstream_gene_variant
G/A 60043743 missense_variant p.Gly115Ser
A/G 60043757 synonymous_variant p.Gln119Gln
T/C 60043763 synonymous_variant p.Pro121Pro
T/C 60043774 missense_variant p.Val125Ala
G/T 60043785 missense_variant p.Gly129Trp
T/C 60043790 synonymous_variant p.Ser130Ser
G/T 60043844 synonymous_variant p.Ala148Ala
C/T 60043956 missense_variant p.Arg186Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04351.1
MTLSTTPLNHETTSLTFPTPRTTMIYVSSISLLQTLPVANGKSSGENPPTQPPSTVKSVLKPKHPRKPSPLTVVTTCTTTSVSCTMFVREALVEGMCKGEKEKEDKRKKLREGVTGEKKQSPSTSVGSRGSSENRGPKLVMFNNKITYAETLEATRNFNEEKVLSKGRYGLVFKASFQDGMVLSIRRFVDGFSW*


CDS Sequence:
>Vu_04351.1
ATGACTCTGTCGACAACCCCTCTCAACCATGAAACCACATCATTGACCTTTCCGACACCGAGGACGACGATGATTTATGTATCCTCAATTTCACTCCTGCAAACACTTCCTGTGGCAAATGGAAAAAGTTCAGGGGAGAATCCTCCAACGCAGCCCCCTTCGACTGTGAAATCTGTGCTGAAACCAAAACATCCAAGGAAGCCTTCTCCATTAACGGTTGTTACCACGTGTACTACAACCAGTGTATCGTGCACTATGTTTGTGCGGGAAGCCCTTGTAGAGGGAATGTGCAAAGGTGAGAAGGAGAAAGAAGATAAGCGAAAGAAGCTTCGAGAAGGGGTGACAGGTGAGAAGAAACAAAGCCCTTCAACAAGTGTAGGTAGTAGAGGGAGTAGTGAAAACAGAGGACCAAAGCTAGTGATGTTCAACAATAAGATCACGTACGCGGAGACATTGGAAGCAACAAGAAACTTCAATGAAGAGAAAGTGTTAAGCAAGGGAAGATATGGCCTCGTGTTCAAAGCCTCCTTCCAAGATGGAATGGTTCTCTCTATTCGTCGCTTTGTTGATGGGTTCTCATGGTGA


Promoter Sequence:
>Vu_04351::LG1:60041034-60043034(+)
AGTTGAACTTTAACACGCTGCACCCTATTCCCCAATTCAGGAGAAACAGCCTCAACAACAGCAATGGTTCCGTTGTCATACAGATCCACTTTTTTTACTCTATCCTTGTCCAAATACTCTAGAAACCTGGAGTAAGACATTCTGGAGGAGGAAGCCCCTTGTTCATCAGCATAAGCTTTGCCACTTCCCAACAGTGCAGGCAAACCAATTCCCGCATTTCCAAGCAATAATTTCAGAAACCCCCTTCTCCCTTCTTGTTGCCTTTCCTCCAAGGATGCCCTTATGGAAAATACTTTCGACGCCTTGTTATTGTTCAACGATGAAAGTCTCCAAGATGAGTAGAGATATCTTCCATTGAAGTCCTTGTTAAGAGCTATTCTATTACCCCTTGTAGATAAACCATTCCCAACAAGGCATGCAGATGATGCCGCCATCTATATCAACAACAGCATCCAACCCAAAACAAGGGCTCTTAAATACTATCATTATCATTGTAAAAAAAAACTTCTCATTTCTTATTACATGAACCAACAAGCAAACCACACTCTAAAGTTCGCAAATTTCTTGAATGAAAAAAAGCATCAAACCAGCAAATCCCAGTTCAATTGACGGAAAGATATAAAAAAAAAATGAGCCTTTGAAAGGAATTCACAAAGTTGAATGCAATTAACACAAAATTAAATATATGAACAACCAAGTAAGCTTTAAGATAGTAGAGAAAAAAATCACACAAAAAAATTAAAAAAAAACCAAAAAAAAAAAATCAAAAGATAGAAGCACGTACCTTAAAAGTAAAATGTGACAGAGAAGTGAGAGTAGAGAATTAGAAGGTCTGGAGACCTTATTGGTGGTGCAAAGGAAGGTGACGATAGAAGGTGTTATTGTGTGGTTTTAGAGGAAGTGGCTATGGTTCAGGAAACTCATACGTGGCGGTTTTCTAACGTTTGATTCGTCCCTCTTCTGTCTGAACTTCATATTTCAGATTTTTCCTTCTTTCCCTTCTAAGTTTCTTTAACGTTGAATCTTGATATTATTATTTTAATATACATTTAAAATTAATTTTTGTCAAATAAATTATGAAGCTAGTTAGTTCTGTGATGTTGTTGAATACTTAGCATCTATTTATTTATTTATTATGAAAAAGAATCTTTAAAAAACATGACAGCAAATAAGTTTTTAAAACACTTTGCTAAATTGTTATTTATAATAAAAAAGAAAATATAATTGGAAACGTTTGCTCCCAAGAAAGGCACGTTGGCGTGAAAGAAATGCTCAACCACATGGAATTTGATTAAAATTTTGGCCATAAAATCTGACTAATAACTAAAGTAGCTTCAACTTTTATCGACATCTCATGATGACACGTAGCTTAATTTCTATGGTTTGCTCAATTTAACATCTCATCACCGTTAAGAAGGAAAAAAAATTGAATACGAGAGTATTTTAATTATTTCTTAATTAATCAACATATATAAATATAACAATATTTAATTTATATATAATGAACACATATAAATATAATATTTAATAGTTAATTATTTTTATTTAGGTATTTTTTAAAATTAAGACGTAAAACTATAATAATTGAAAATTAAAATTTAGGAATTCGGTTTGTATTTTATATATTTATGTTTTTTATTTAAATTTATGAAGTTAAAATTATTTTTAAAGAGACTAGCATATTTATATATATACTTTGTGGTATAGTTTATTTTATATTTAAGGTTTAATAATTTCGGATGTGTCTATTTTTGTAGAATCGTCTCAAATAGATCTTTGTAGTTTTTTTATCTCAATTAAGTCCATATTTCTTTAAAATTGAATCAATTGGAACCTTGTGGTTAATTGGATTGCACGATGCTAAATTTACTCTCTCGTGGCATGCTAACTATGCAATGATTAAGCACGTGGCGTGGAACTTCACACTTCTCTTGGCTCACTCAAATCCCCAAAATGTTCAATCCTCAAACATTTGCCACCACCATTGCTGCTGCTAGTCA


Gene Sequence:
>Vu_04351(+)
ATGACTCTGTCGACAACCCCTCTCAACCATGAAACCACATCATTGACCTTTCCGACACCGAGGACGACGATGATTTATGTATCCTCAATTTCACTCCTGCAAACACTTCCTGTGGCAAATGGAAAAAGTTCAGGGGAGAATCCTCCAACGCAGCCCCCTTCGACTGTGAAATCTGTGCTGAAACCAAAACATCCAAGGAAGCCTTCTCCATTAACGGTTGTTACCACGTGTACTACAACCAGTGTATCGTGCACTATGTATGATCGAAGCTCCAAGACAATGTGGTCAACATAGGTTGCCCTATGCCGTGGTGCAGGGGATTATTGGGTTCACTCTTGTTGGATGTCAAAACTGTCTAATTTGACCATGTTGAACCTTTCTTCAAATCTTTTAAATGGGGAAATTCCTATTGAACTGTCAAGCATTTCTGGTTTTGGAGTATTTAAATGTGTTTAGTAATAATCTTGAGGGTGAGATTCCATACGTGCTTGGTGCCAGATTCAATAACCCTTCGGTGTTTGCAATGAACCAAGGTTTGTGCGGGAAGCCCTTGTAGAGGGAATGTGCAAAGGTGAGAAGGAGAAAGAAGATAAGGTTAATAATGTTGATAGGCGTGGGAGTTCCTGGCTTGTGCCTTTTGGTGTTGTGCTGTTGTGGGTATGTTTACAGCCTCTTGAGGTAGCGAAAGAAGCTTCGAGAAGGGGTGACAGGTGAGAAGAAACAAAGCCCTTCAACAAGTGTAGGTAGTAGAGGGAGTAGTGAAAACAGAGGACCAAAGCTAGTGATGTTCAACAATAAGATCACGTACGCGGAGACATTGGAAGCAACAAGAAACTTCAATGAAGAGAAAGTGTTAAGCAAGGGAAGATATGGCCTCGTGTTCAAAGCCTCCTTCCAAGATGGAATGGTTCTCTCTATTCGTCGCTTTGTTGATGGGTTCTCATGGTGA