Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04558 LG1 64039672 64043799 PREDICTED: cyclin-dependent kinase G-2 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to salt stress, regulation of mitotic cell cycle, regulation of mitotic cell cycle, regulation of long-day photoperiodism, flowering, regulation of long-day photoperiodism, flowering, regulation of long-day photoperiodism, flowering, protein phosphorylation, protein autophosphorylation, protein autophosphorylation, protein phosphorylation, regulation of long-day photoperiodism, flowering, cellular response to salt stress, protein phosphorylation, cellular response to salt stress, cellular response to salt stress, regulation of long-day photoperiodism, flowering, protein autophosphorylation
Cellular Component   is active in   nucleus, nucleus
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, protein serine/threonine kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein binding, protein binding, cyclin-dependent protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, cyclin-dependent protein serine/threonine kinase activity, protein binding, protein binding, cyclin-dependent protein serine/threonine kinase activity, protein binding, protein binding
Pathway   B 09181 Protein families: metabolism   C 01001 Protein kinases [BR:ko01001]
SNP Position Effect Amino acid change
T/A 64039758 5_prime_UTR_variant
C/T 64039767 5_prime_UTR_variant
T/A 64039814 5_prime_UTR_premature_start_codon_gain_variant
C/A 64039888 5_prime_UTR_variant
T/A 64040782 missense_variant p.Ile200Lys
A/T 64040783 synonymous_variant p.Ile200Ile
G/T 64040966 missense_variant p.Trp261Cys
G/A 64041044 synonymous_variant p.Ala287Ala
T/A 64041045 missense_variant p.Ser288Thr
G/T 64041156 missense_variant p.Gly325Cys
T/A 64041326 synonymous_variant p.Ser381Ser
C/A 64041328 missense_variant p.Pro382Gln
T/A 64041509 synonymous_variant p.Thr442Thr
G/T 64041695 missense_variant p.Met504Ile
G/C 64041701 missense_variant p.Gln506His
C/T 64041818 synonymous_variant p.Ala545Ala
G/T 64041830 synonymous_variant p.Gly549Gly
T/G 64041971 downstream_gene_variant
G/A 64042240 downstream_gene_variant
G/A 64042754 downstream_gene_variant
T/A 64042777 downstream_gene_variant
A/G 64043779 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04558.1
MAAGRHGGYRENDFRERESKLEGSRRGLANSKEDYDRVRNGGGDVVRGGSRDRVRVRQRDIKEREGVNGGYRSSSSRSDSGSSGLGPRRCGFSIKAMDREPGELSSESGSDDAIESESRAKDSEVSMLEETRTRSPPVPDRKRKFSPIVWDQDDKDVSESSRVRVSASTVVTAALPPPPPLPKVFHQSPSPNAPNGVVQIHPVKNKETEDLQLNAASKITLPSPSGLHSSPPKGRWGNDQETDHLEGEVYVPARNISSSRWAAGDNSPGDEGEILNDEEMPKRRRKASPEFLDGRPRNKLLSPVESKIEGIEGARARSSESEERGVRGRTSSSDDHPGMESEKDDFMEVDPQGGKSETSVSHSETEYEDEDDGRETPEPPSPPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFDQLDKIFRILGTPNEAIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRIYKSPDPLEEQRRKELQQGESGTGGIFG*


CDS Sequence:
>Vu_04558.1
ATGGCGGCTGGGAGACATGGCGGTTACCGCGAAAACGACTTCAGAGAGCGCGAATCGAAACTCGAAGGTTCTAGACGCGGGCTTGCCAATTCGAAAGAGGATTACGATCGTGTTAGGAATGGTGGCGGTGATGTTGTGAGGGGAGGGTCCAGGGACAGGGTTAGGGTGAGGCAGAGGGATATTAAGGAGAGGGAAGGTGTTAATGGTGGGTACCGATCATCTTCGAGTAGGAGTGACTCTGGCAGCAGTGGCCTTGGTCCTCGCCGATGTGGTTTCTCTATCAAAGCAATGGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCAATTGAGTCAGAATCTAGGGCGAAAGACTCCGAGGTTTCCATGTTGGAAGAAACAAGAACCCGATCCCCACCGGTGCCGGACAGGAAAAGAAAATTCTCGCCCATAGTGTGGGATCAGGATGACAAAGATGTCAGTGAGTCATCCAGAGTTAGGGTTTCTGCCTCTACGGTGGTGACAGCAGCACTTCCTCCTCCGCCTCCATTGCCAAAGGTATTCCATCAGTCACCGTCACCAAATGCTCCAAATGGTGTTGTACAAATACATCCTGTCAAGAACAAGGAGACCGAGGATCTCCAGTTGAATGCAGCATCTAAGATTACCTTGCCCTCTCCTTCTGGTTTGCATTCATCACCTCCGAAAGGGAGGTGGGGTAATGATCAGGAAACTGATCATCTAGAAGGTGAAGTTTATGTTCCAGCTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGGTGATGAGGGTGAGATCCTCAATGATGAGGAGATGCCCAAACGAAGGAGGAAGGCGTCTCCTGAGTTCTTGGATGGCAGACCAAGGAACAAGTTATTGAGCCCTGTGGAATCCAAGATTGAAGGTATTGAAGGAGCTAGAGCCAGATCATCTGAATCTGAAGAAAGAGGTGTCCGTGGGAGAACTTCCAGCAGTGATGATCATCCTGGTATGGAGTCAGAGAAGGATGACTTCATGGAGGTTGACCCTCAGGGTGGGAAAAGTGAAACAAGTGTCAGTCACTCCGAAACGGAATATGAAGATGAAGACGATGGTAGGGAGACTCCAGAACCTCCTTCTCCACCCCAAAGAACTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCTAGGGATAAAAAGACCGGAGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAGGAGGGCTTCCCACTGACTTCTCTTAGGGAAATAAATATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTCATGGTCATGGAATATATGGAGCATGACCTTAAAGGACTAATGGAAGCAATGAAGCAACCTTTCAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACATCAAATCTGCTTTTAAATAATAGGGGTGAGCTCAAAATTTGTGATTTTGGCTTGGCCCGTCAGTATGGGAGTCCTTTAAAGCCATATACACACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTCCTTCTGGGGTCAAAACAGTATTCAACAGCCATAGACATGTGGTCTCTAGGCTGTATAATGGCTGAGCTATTATCTAAGGAACCACTGTTTAATGGGAGAACGGAGTTTGACCAACTTGACAAGATTTTTCGGATTCTAGGCACCCCTAATGAAGCAATATGGCCTGGTTTCTCAAAATTACCTGGGGTCAAGGTCAATTTTGTCAAACACCAGTACAACCTCCTGCGGAAAAAATTTCCTGCGACATCATTCACTGGATCTCCTGTTCTTTCTGATTCAGGATTTGATTTGTTGAACAAACTTCTAACATATGACCCTGAAAAGCGGATCACTGCTGAAGCTGCTCTAAATCATGAGTGGTTTCGTGAGGTCCCTCTCCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACACGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCAGATCCTTTAGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAATCGGGGACTGGTGGAATTTTTGGCTAA


Promoter Sequence:
>Vu_04558::LG1:64037672-64039672(+)
AAATATTTAAAGTTTACCTAACACACTCATACCATCATGTAATGACAGTACATTACTCCACATTTATACGACTTCCATACATTTAATACCCATAAAACATTCCATGCAATTACAAAATAATAATTTATTATACCCATAAACCCATGTTGGTATCTCTATTGAGAACACAACCCATCACCAATGCACTCTATTGTCATATTTCACTCATACAACATGTTAACACTTCCTACTCTTATTTACATTCTTAACCTAGCCAACCTACGACTACCCTCCAAAGATTCACGATATGCACTTTTCCCTTACTACAAAACCACATGCATTGTAATCCTTCAACCCATGCATTCATATTCTGGGAATAACATCCCAAACCATTTTTTTTCCTTAGCAACCCACAACCTTCCAATTGGGTATACTATCTATTCACATAGTTTCTCAAGATTAACAAGTTTCAAAAGAAACACATCATGCTCAATCAATACATAAAAAAGTTAACTCCCCTTACCTAGGTTTTCTAGTGAATTCTTTAAAGGCCCCTTGGTTCCTAGAAAATCCTGTGACTGCAACAAGGGCCCCTGCGCAACTCCTTGGTACTCACAATCTTCTCCCTATTACTCATTACGCTTATGGTGGAGGACAAAAAGTGATGGTTTCTCTCTTGCGTACTCTCTCGAGTTGTTCTAGAATGTAACTTAGGGTTGCTTCTTATTTCACACACAAGCCGCCAGAGGCCGCGCATTCTTCCTCCCCCGCTGTCGTCGTCGTTGAGGATACCCAGCTAGTGGCTCCCCCACGCTCCCAGGTCTCGCCGGATTCCCTCCAGTACCCACCAGATTCTCATTTAAGATTCATGGAGCTTATAATATAATGGCAAAGCTTCCCAGGAAGTTATTGGAAACGGGAGTTATCTGCTCTGCGGTGATTGTTATGTGAAGAGGGTTACTCCAAAGGCGAGGATTATTGAGGTGGAGCCCTCTGATGCAAATGCAATGGCGTTGTCATTCCATCATGATCAGAGAGTGATTTTGGACCAGGTTGGAGGATTTGCAGATGGTGTGGTTGTTGAGATTTGCACCTAACTTATCATTTTAATTTTTTTAAAATATTTACATTGTGCAACCTCTTCAAACGTGCCACGTATTCATAACACCACATTGCACCGTTATGTTTTTAACGGCGTAAGTGAAAAAGACCGGATTGAACAGTTTTTAACGAAATATGGAGTCTTACTGAACTTTTTTAAAAGGTAGGATCACTTTAAACCAAACCCCTAAAAGTAAGAACTAAATTAGGTATTAAACCTATAAATTAATATATACAATCATATGTAAATAATAAAAATAAAAAGGTTTAATCCTTTTCGACATCCCTATTTATGTACGAATGTCTCAATTGGGTCCTCGTTTTTTAAAGTGTATCAAAATGGTCCTTAATTTTGAAAATTGATATCAATTGAGTCCTTTCCGTTAAGTTGGCTGGACGGCGTTAAAAAAATTGATGAGTGAATGCTGAGATGACGAACGAACGCTCGTCCACCAGCGAACGAACGCTCGTCCACCAGAGAACGAACGCTTGTCGACCTCTTACTACTGGACGACTGTTCGTTCCACACTGGACGACCGTTCGTTCGGTGGTCGACGAGCGTTCGTTCGCTGATGGACGAGCGTTCGTTCGCTGGTGGACGAACGTTCGTTCGTCATCTCAGCATCCCACTTATCAATTTTTTTAACGCCGTCCAGTCAAGTTAACGGAAAGGACTCAATTGATATCAATTTTCAAAATTAAGAACTATTTTGATACACTTTAAAAAACGAGGACCCAACATTCGTACATAAATAGGGATGTCGAAAAGGATTAAACCAAATAAAAATGATAGCAATGCTCTATAAAATTGGTATGATGGGCACGGAGTAGGATGTGCGCTAAATCTAATCAAATAATTATGTTAAAACATTGTATTATAACATTTTGTTTTAAAACATTTTGGAAAAAACGAGTATCCG


Gene Sequence:
>Vu_04558(+)
GATGATATCCAGTTTTTTTGTCACCCAGATTCCTTTTGGGCCCAATTTTCTTTCACCAAGAAGGGTCGTTCTCTCTTCCCCTCTTTTTTTCTCTTCTCTTCGCAGCCGCACCGCATCGCGTCGCATCGCTTATTCGATTGCGTTGCCTCTCTTGCGCTTTCTCTTTTAATATCCAATTTCATCACCTTCATCGCATCGGTAAGCCTTTTCAATCTCCCTATCAATCTTCAAAGCCTCTTCCTAAATTTCTAGGGTTTCAATTCTAATCCTCTTTTTTCCTTCTAACTTTATTTCAACTCATAGTGTTTCTATTTAGCCTTGTCTCGTGATCTCCAATCGCCTTCAGATCTTTCACGATTTCTTCTTTAGTTTTGAAATTCCACGTATTTGTTGTATTTTGGGTTTAGGGTTCTATAAAACAAAAAAGAAAAAAAGAAAAAAAATACAAAGTCGTTCCGAAGGGGGATTAGGGTTTTCCCTTGTGATTCACGCATTTAGGTAGCTAGAGATATATGGCGGCTGGGAGACATGGCGGTTACCGCGAAAACGACTTCAGAGAGCGCGAATCGAAACTCGAAGGTTCTAGACGCGGGCTTGCCAATTCGAAAGAGGATTACGATCGTGTTAGGAATGGTGGCGGTGATGTTGTGAGGGGAGGGTCCAGGGACAGGGTTAGGGTGAGGCAGAGGGATATTAAGGAGAGGGAAGGTGTTAATGGTGGGTACCGATCATCTTCGAGTAGGAGTGACTCTGGCAGCAGTGGCCTTGGTCCTCGCCGATGTGGTTTCTCTATCAAAGCAATGGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCAATTGAGTCAGAATCTAGGGCGAAAGACTCCGAGGTTTCCATGTTGGAAGAAACAAGAACCCGATCCCCACCGGTGCCGGACAGGAAAAGAAAATTCTCGCCCATAGTGTGGGATCAGGATGACAAAGATGTCAGTGAGTCATCCAGAGTTAGGGTTTCTGCCTCTACGGTGGTGACAGCAGCACTTCCTCCTCCGCCTCCATTGCCAAAGGTATTCCATCAGTCACCGTCACCAAATGCTCCAAATGGTGTTGTACAAATACATCCTGTCAAGAACAAGGAGACCGAGGATCTCCAGTTGAATGCAGCATCTAAGATTACCTTGCCCTCTCCTTCTGGTTTGCATTCATCACCTCCGAAAGGGAGGTGGGGTAATGATCAGGAAACTGATCATCTAGAAGGTGAAGTTTATGTTCCAGCTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGGTGATGAGGGTGAGATCCTCAATGATGAGGAGATGCCCAAACGAAGGAGGAAGGCGTCTCCTGAGTTCTTGGATGGCAGACCAAGGAACAAGTTATTGAGCCCTGTGGAATCCAAGATTGAAGGTATTGAAGGAGCTAGAGCCAGATCATCTGAATCTGAAGAAAGAGGTGTCCGTGGGAGAACTTCCAGCAGTGATGATCATCCTGGTATGGAGTCAGAGAAGGATGACTTCATGGAGGTTGACCCTCAGGGTGGGAAAAGTGAAACAAGTGTCAGTCACTCCGAAACGGAATATGAAGATGAAGACGATGGTAGGGAGACTCCAGAACCTCCTTCTCCACCCCAAAGAACTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATATGGTGTTGTATATAGGGCTAGGGATAAAAAGACCGGAGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAGGAGGGCTTCCCACTGACTTCTCTTAGGGAAATAAATATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTCATGGTCATGGAATATATGGAGCATGACCTTAAAGGACTAATGGAAGCAATGAAGCAACCTTTCAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACATCAAATCTGCTTTTAAATAATAGGGGTGAGCTCAAAATTTGTGATTTTGGCTTGGCCCGTCAGTATGGGAGTCCTTTAAAGCCATATACACACCTGGTGGTTACTCTTTGGTACAGGTAAATGCTAATCTGCTTATATGTGCAATTTGATTATGTCTTTTATTTCTCTGTATGTGTGTATTTACATCACAGGCTATTTGGTATTTTACATTCTTGGGTATAGTTTATTTTTTTCTCATGAATTTTGGAACCGTATAGCGATGCTGTCATGTTCAATAATTCTAATTAAACTAGTATCTGTTTGAAGCTATTTTTAGTATGCAACGATGTAGCCTCATTGCCTAATAGTTGCTACTTTAGGTCAATATTTACGTTCTCATCCATCCTTTTTATGCAGCAGTAATGCTGTTACATGGGTGCATTGTCTGTCATCACAGATTTGTTGCACTTGCCTTCATTTTACTATTTTATCTCAATGTGTTTGACTACATTCTCTTGCAGAAATGAGGTTATTACCTAATTGTTGTCTATATGTTTCTCAGGGCACCTGAACTCCTTCTGGGGTCAAAACAGTATTCAACAGCCATAGACATGTGGTCTCTAGGCTGTATAATGGCTGAGCTATTATCTAAGGAACCACTGTTTAATGGGAGAACGGAGTTTGACCAACTTGACAAGGTATGATAATGTTATTTTCCTTACATCGGATATATTCTAGCATCATTGTTCTCTTTCCTTGTAACCTATGGTTTCTTGCACTTAACTACTTTGTGGTTGTTTTACAATTTTGATTTATGTTATTCTTGTAGATTTTTCGGATTCTAGGCACCCCTAATGAAGCAATATGGCCTGGTTTCTCAAAATTACCTGGGGTCAAGGTCAATTTTGTCAAACACCAGTAAGTGCTTACGATTTCCTTTATTAAGAAAATTACTGTTTGATTACATTGTGCTTATGTTTTGCCACTGTTTTCCCAGGCTTCCAGCTTTGGGTGGTTCTGGTCTGACTATCTGGCCTCCCTTGGTGACTTGACTGTTGAACAACTTTTCTATTTTGTATTAACAGTCGGAATGTTCCTTTCAGGTACAACCTCCTGCGGAAAAAATTTCCTGCGACATCATTCACTGGATCTCCTGTTCTTTCTGATTCAGGATTTGATTTGTTGAACAAACTTCTAACATATGACCCTGAAAAGGTAAAGGTTACATGAGATACATAATTTAATTTGGTAATAAATATTTGTGTGAATATTAAGATAAGACACTATTTTATGCAGCGGATCACTGCTGAAGCTGCTCTAAATCATGAGTGGTTTCGTGAGGTCCCTCTCCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACACGCTCAGGACAGGTATTTTAACCTAATAGGAAATCCTGGAGCAGTTCTTTTATACCTAAAACATTACGTAACTGTTTTATATTCTTGACAGAGGAGAAAAGTTGTGTACAATATTGAGTCCTTATCAACAATTTTCAGTTTTGACAAGTTTTCACAATTTCTTCATATGAATAGGCGTGTGCGGAGAATATACAAGAGTCCAGATCCTTTAGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAATCGGGGACTGGTGGAATTTTTGGCTAAGAATGGTGCTTGCTAAGGCTGTGTCTCAATAATCATTCTGAAACTGCTGAATGTTTTAGTGTTTGAGGTGAGGGTATGCACTGAATGGAAGTTGGAAGCATGTTTGTTAGACGATCACTCGTGCTGTTTTTTAACAGGAACATTTTGGTTTAGCGAAGATGTATTCTTTTACCTCCCTGGCAACCAGATTTATTTCAGGTTAACATTCTTGATGCTTGATCATTATATAGAAATGCATCTGGGACATAGCTTGCTGCTCGAGGTGTGGCATTATTGGCTTCTAAAATTAGGAATTGTCAGTGTCTGCTGAAACTTTGTAACATATTTCCATTGGCATATTTGTAAACAAATTTTATCTGGTTTTGAGTATTAAAGCACTGGATTTTCTAGGAGC