Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04754 LG1 68264797 68268132 PREDICTED: cyclic dof factor 1-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, DNA binding
SNP Position Effect Amino acid change
G/T 68266426 synonymous_variant p.Ala79Ala
C/A 68267018 downstream_gene_variant
G/T 68267768 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04754.1
MSEVKGSAIKLFGRTISLPHNDSSAPPTLACPSSSSSPPELTSATQQHQEDQEPQRKELTSLEDDDASSHETTEDLKSAASDALENPKTPSAETETSLQKSPENEEQSETSASEEKTPKKPDNILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNTSAAAVSHYRQIMMPEAFQGATLNASNGLHNALFGNGSAVLTFGSDTPLCDTMSSVLNIAERAQSCVSNGFHATEPSGYFSYSKEGDGGGHSTGVSVSTTSNSSHASSHESVDKRVEGFTPQLSYFPGAPWPYPMPPTFFQPRYPLSFHTTPAYWSCMPPSWNISCMSSQSSDSNTVSAPILGKHSRNGNIITPSNSQKEIHNSSEHNFLIPKTLRIDDPGEAAKSSMWSKLGTKNDRTSSGGLFQAFPPKGNDMNHRVEASPQLQANPAALSRSLTFHEQT*


CDS Sequence:
>Vu_04754.1
ATGTCAGAGGTTAAAGGCTCTGCCATAAAACTCTTTGGAAGGACAATTTCTCTGCCACACAATGATTCTTCTGCACCTCCGACTCTCGCTTGTCCTTCCTCTTCCTCTTCTCCCCCGGAACTTACCTCTGCAACACAACAACACCAAGAAGACCAGGAACCACAGAGGAAAGAACTTACCTCACTCGAAGACGATGATGCCTCATCACATGAAACCACAGAGGATTTAAAATCTGCCGCTTCAGACGCACTCGAGAATCCTAAGACTCCCTCAGCGGAAACAGAGACATCACTGCAGAAATCTCCCGAAAACGAAGAACAGAGTGAGACAAGTGCTTCTGAAGAAAAAACACCAAAGAAACCTGACAACATACTTCCATGTCCGCGGTGCAATAGCATGGACACCAAATTCTGCTATTACAACAACTACAATGTCAACCAGCCTCGTCATTTCTGCAAGAACTGTCAGAGATACTGGACTGCAGGAGGAACGATGAGGAATGTGCCCGTGGGTGCTGGTCGCAGAAAAAACAAGAACACTTCGGCTGCAGCTGTATCACATTACCGACAGATAATGATGCCGGAGGCATTTCAGGGAGCTACACTGAATGCCTCCAATGGATTGCATAATGCCCTTTTTGGGAATGGGTCAGCTGTGTTGACTTTTGGTTCTGATACCCCTCTCTGTGACACCATGAGTTCTGTGTTGAACATTGCTGAGCGAGCCCAAAGTTGTGTATCAAATGGGTTTCATGCAACTGAGCCAAGTGGTTATTTTTCCTATAGTAAGGAGGGTGATGGGGGTGGTCATTCTACTGGAGTTTCTGTTTCAACAACTTCAAATTCCAGCCATGCTAGCTCACATGAATCGGTTGATAAAAGAGTTGAAGGTTTCACTCCTCAGTTATCATACTTCCCAGGTGCCCCTTGGCCTTATCCTATGCCTCCTACATTTTTCCAACCTAGGTACCCTTTATCATTCCACACTACACCAGCCTATTGGAGTTGTATGCCACCCTCTTGGAATATCTCATGTATGTCATCCCAATCTTCTGATAGCAACACTGTCTCTGCCCCCATTTTGGGGAAACACTCAAGGAATGGGAACATCATCACCCCATCGAATTCACAGAAAGAAATACATAACAGTTCAGAGCACAATTTCTTGATTCCCAAGACTCTTAGAATCGATGACCCTGGTGAAGCTGCAAAGAGTTCCATGTGGTCAAAACTAGGAACCAAGAATGACAGGACCAGCTCTGGAGGCCTTTTCCAAGCTTTTCCACCCAAGGGAAATGACATGAATCACAGGGTTGAAGCATCACCACAGTTACAAGCCAACCCTGCAGCTCTATCGCGCTCTCTTACCTTCCATGAACAGACCTGA


Promoter Sequence:
>Vu_04754::LG1:68268132-68270132(-)
TACCATTCTAACATTGACATAACTCCTCATGTTTTGTATGAGAGGAAGTGTAAGCCTCTAGTGTGTTGGTTTCGGGATTGAGAGAAAGTTTTGGTGGAACTATAATTGTTGTAGCAAACTAAAGAAAACATTAGACTAGTATAGGACAAGATGAAGGTCTGCTCGAGTCAACCGAAATCTTAAGCAAATCAAATAATGAGACCTCTGGAGTTGCATTAGGTGATCATATTTAAGTATATTTTGAATGTTTTCTTTACTGATTTTAATTGTAATATTTAGTAAGAATTAATATGATGTTATGTGATAACAAAATTTATACGAAGTTTATAAATATTGTAAATTAAATTCCTATATTACTTTTAAGTAATATTAGTTTATGTTTATGTTTTTTTTTATGTATTATGATTATGAGAAAAATGTTGGTAATAAATCTTATAAAAAATAATATAGTGTCCTAACATGTTAAGTGGGACTTATCTTTCTTTCCTAAAAGAATCAATACGCTAATAAACTGACTAATGGAGATTGGCGAGAGACTTGAATTTAAATTATTTAGTTTCTTTTATACTTTTTTTAATCTTGTTTTGTTTTTTATCAACTCCCTATGTTTCGAGTTGTATAGTTCTTTTATAGGGAGTTTACTTCGTATTTTTTAAACATGAATTTTGTTCAGTGCTTCATGTTTTTATTCTCAGTTTTTTAATAATATATTTTCTATGATAATATACATAATAAATAAACTTTATAGTATTAATTCAACTAAAAAGCCAAAATATATCATGATATTTAACATGGATTTATAAAAAAACCAATAGATTTTTTTATTGTAATATTAAATATATTGGTGATAAATCTATTTGTTTATAAGGCTCGTTTGCTTAAAATTATACAATTACTTGCATATGCTTCATTTTTAAAATCATAGTAATTATTAGTAATTATATAAGTAGAGTCACAAGTTCCAAGGAACGTTACGACAAGCCACATTAATAAAAATTGTAAGTTTATCAGCTAATTATTTATTTTAGATGTTTATGGTATTTAATGGGGGCGAGAAAAAAAAATTAATGCTTCATAAAAATTATTAAATGTATTATGAAAAATCAACTTATTATTATAGTAAATTATGTATTATGTTGAGATAGTATAGTACGTTGGAAGAGTTTTTACCTAAAAAATATGGGCAGTGTTAAGGAAAAGACAAAGTATGAAATTTATTTAGCATTAAAAACATTTACAGAAAAGACAAAGTCTGACATTCATTTAACGTTAAAAACATAGAAAGGAAAGACAAAGTAATACATTTATTTAACATTAAGAAGATTTAAATAAAGAGTAATGAAGCATTAATAGCATTTATTTTTAAACACTTAATTAAAAGTTTTTCTTGATGTGTTTCTGTTACATCCTATCCTATGATGATGTAGAATATTTGTTTGGTTTTAGGAGAGGTTATTTGGGTGTGATTTATGATTTGAGTTTTGTGAAATGAGGGAGAATTAAGAGAGAGAAGAGGTGGGGTCAAAATGAGAGGTGGGAGGCAATTTGACTAGGAAGGAAGAAAGTGTTACTAGAGTGGTTGACGAAAAAGGCAAAAAATGAAAATGCTGACAGGGATGAAAAAGGGTGGGACAGAACAGCACTATCTTTAGAAGCAATGTGGGAGAATCCAACAGCACACACAAAGATCTCATAGGCCACAAGAACTTGTGACTCACAAAATTCTTACCTTTTCCTGAGGTGGCAACATGTTTTTTCTCCTCTTCCTAAAATAAAAACCACACCCAACACAACACCACACCACACAACACAACAAAAACAAACAAACTTACTTCACCACTTCACCCATCCCCTCCCTCTGTCACCATTCATTATCCGTTTTCATATCAATTAACAGTGCAAAAGACACCAAAAAAGAGAGTTACTGTGTGCACCAACGACAACAACTTCTATATATCTATCTATCTACATATACTTATGTATATATATTTTTCATCGTT


Gene Sequence:
>Vu_04754(-)
ACTTTCCCCATTTTTCTAGAAAGAGAAGGAGCAAGCAAGCAAACCAAAGCAACAACAAGAGAGAGATATTCCTGATCCTGACCCTCATCACCATTTTTATATCTCAGGAATGTCAGAGGTTAAAGGCTCTGCCATAAAACTCTTTGGAAGGACAATTTCTCTGCCACACAATGATTCTTCTGCACCTCCGACTCTCGCTTGTCCTTCCTCTTCCTCTTCTCCCCCGGAACTTACCTCTGCAACACAACAACACCAAGAAGACCAGGTACGTCCACCACCATATTTGTTTTTGGTTGAGTTTGTGGAAAACCATGTCGATTTGCAAATCTAACCGCGACCCATTTTGCAGAACCATTCAATTGCTCATGGGTGTTTTCAAATCTTGAAAAAGTTTTCTTCTTGGCATCGTGTCAATTCAGTTTAATTCAGGGCCTGCTGAAATTTTTTGTGGTTATTTTTATTTGTTTTTTTAATGACGCGTTTCGAATTTATTTAATCATCATTTAAGTGGTGGCGAGAATTCGCTGTGGGGTTCCTTTCGTCCAAATTGGATCCAATCTCCTTTATGGAATACAAGTATAAGAATATTGGATGGAATATATCATGTGGTTTGGCTAGCTTTGGTTTTAGCGTTCTCTTTTGAGTCCATGAATTTGCTTTTATGCTACAAAGCGAGTTTTCTAATTTTAGTGATTTCTTCCTGTTTGGAAAATATTGTCCTAAACGGGTTATTTGGCGACTTCAATCGAAATTCAAAAAAAGAAAAAAAAATATTGTGTCTATTTTAAATGAGATCTCTTGCAGGATCCCAGAGGTACTATGGCTAAGTTTTTGGCTTGAATATCTTCTTGTTTTACTTAACTCTAATCTGATCACGTTTCTTTTCACACCAAGGACTTTAATTGGAGCTTAACTCTTCTAATTTGACACTTTTGTCCATATTCGAGTCCTTATTTAACAATTGTCCAAATGACCCCTGATTTTGTGACATCACTGAGGACATATTTATATTTATAGACTGCTTTTGATTTAATTATCTTCCAGCTGTTTCATACTCTTATTTTCTTCTTCCCCTTGAATTCCTTCTATAGTCCTGTATTTGTAAATTTCAAAAGATCATTTTCTCGATTGTCACCTACATATTTACATCTATAATTGTGGTTTTCTTTTGCAAATCTAGAATTGAGATTTTGGCGCTGAAATTGTTCAATTGACTCTGCTCCTTACGCTTTCACGTGAGCGACTTCGTTCATTGAACAAAGTACTTACCCTGTTAACTACCTTAACGTGGAAGGAAAATAATATCTGCCCCATTTTTGGTGGTGTGAATTCACTCACCCTCCTACTTTTCCCCTGAAATATCTAAGAATTTTTTATATGTTGAATTAGAGTCACCAAATAAATAAATAAAATGTATCAATTTCACATGTCTAATTCTTCTATTTTGGGCTATGTAAATAACATGCTTCAAGCAAAATTTGTGAATCTTAACGTGTGATAATGGTAAATACCAGTATATCATTTCTTTTTTGTTGATTTAACGTACTGAGTTCACAGTTTTACAATTCCACGAGCTTAGCCATAGTAAATTAGCAATTCTAACCTTGGTCAGGTTCACTGTTTTAGGAACCACAGAGGAAAGAACTTACCTCACTCGAAGACGATGATGCCTCATCACATGAAACCACAGAGGATTTAAAATCTGCCGCTTCAGACGCACTCGAGAATCCTAAGACTCCCTCAGCGGAAACAGAGACATCACTGCAGAAATCTCCCGAAAACGAAGAACAGAGTGAGACAAGTGCTTCTGAAGAAAAAACACCAAAGAAACCTGACAACATACTTCCATGTCCGCGGTGCAATAGCATGGACACCAAATTCTGCTATTACAACAACTACAATGTCAACCAGCCTCGTCATTTCTGCAAGAACTGTCAGAGATACTGGACTGCAGGAGGAACGATGAGGAATGTGCCCGTGGGTGCTGGTCGCAGAAAAAACAAGAACACTTCGGCTGCAGCTGTATCACATTACCGACAGATAATGATGCCGGAGGCATTTCAGGGAGCTACACTGAATGCCTCCAATGGATTGCATAATGCCCTTTTTGGGAATGGGTCAGCTGTGTTGACTTTTGGTTCTGATACCCCTCTCTGTGACACCATGAGTTCTGTGTTGAACATTGCTGAGCGAGCCCAAAGTTGTGTATCAAATGGGTTTCATGCAACTGAGCCAAGTGGTTATTTTTCCTATAGTAAGGAGGGTGATGGGGGTGGTCATTCTACTGGAGTTTCTGTTTCAACAACTTCAAATTCCAGCCATGCTAGCTCACATGAATCGGTTGATAAAAGAGTTGAAGGTTTCACTCCTCAGTTATCATACTTCCCAGGTGCCCCTTGGCCTTATCCTATGCCTCCTACATTTTTCCAACCTAGGTACCCTTTATCATTCCACACTACACCAGCCTATTGGAGTTGTATGCCACCCTCTTGGAATATCTCATGTATGTCATCCCAATCTTCTGATAGCAACACTGTCTCTGCCCCCATTTTGGGGAAACACTCAAGGAATGGGAACATCATCACCCCATCGAATTCACAGAAAGAAATACATAACAGTTCAGAGCACAATTTCTTGATTCCCAAGACTCTTAGAATCGATGACCCTGGTGAAGCTGCAAAGAGTTCCATGTGGTCAAAACTAGGAACCAAGAATGACAGGACCAGCTCTGGAGGCCTTTTCCAAGCTTTTCCACCCAAGGGAAATGACATGAATCACAGGGTTGAAGCATCACCACAGTTACAAGCCAACCCTGCAGCTCTATCGCGCTCTCTTACCTTCCATGAACAGACCTGAATGAGAATCACGGTGAGGCAAGTGAGATTCTCACTGTGCTTATGCATTGATATGAAAAACAAGGTTTATGCAAGTAGAACCCCATTTTGATGAAAAGTGTTGTTTCTTTCCCTCAAGAAATTGTTTTATTGAACAACCTCTGAGTAGGATTCCTAGGAGCAAATTGTTTCTTTATGGCTTCCCCAGCTACCATCTTCAGCCTGTTAAACTGAACAGGTGTTTTTGCTGCATAATTAGGAGATCTGTTGAGTAAATATCTTGGTGTATAGATATAGATATATATAAATGAGACAAGGAAAACTAGGAGGAGAAGAAACAATGGCAAGGAGATTCTTAGACTAAAATCCAATGGTTTAGAATACACATGCAAGTCTTCATTGGAATTCTCTTGTTATTTTTTCCCTTTTTTTTTTTTACAGATTCTCTACTTTAATAATGTTAGTCCCAGATTATGATATTTATGTAAGCTTTCTTTATTTT