Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04813 LG1 69379980 69383229 "PREDICTED: protein kinase 2B, chloroplastic "
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, cellular response to oxygen-containing compound, response to salicylic acid, response to wounding, cellular response to organonitrogen compound, cellular response to organic substance, cellular response to organonitrogen compound, signal transduction, cellular response to oxygen-containing compound, protein phosphorylation, cellular response to organonitrogen compound, defense response to bacterium, regulation of defense response, immune system process, cellular response to organic cyclic compound, defense response to bacterium, cellular response to organic substance, cellular response to organic cyclic compound, defense response to bacterium, protein phosphorylation
Cellular Component   located in   plasma membrane, cytoplasm, plasma membrane, nucleus, plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/T 69381178 stop_gained p.Gly109*
C/A 69381389 intron_variant
C/T 69381432 stop_gained p.Gln143*
T/G 69381655 intron_variant
T/G 69382023 synonymous_variant p.Pro226Pro
G/A 69382197 intron_variant
A/G 69382201 intron_variant
G/A 69383024 3_prime_UTR_variant
T/C 69383226 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04813.1
MGNCLGSSAKVEAAHSSRTPSGISKTSPLSVPSNLSIQSYCEASDVSSLPTPRSEGEILSSPNLKAFAFNELKNATRNFRPDSLLGEGGFGCVYKGWIDEHTFTASKPGSGMVVAVKKLKPEGLQGHKEWLTEVDYLGQLHHQNLVKLIGYCVEGENRLLVYEFMSKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAQSQVIYRDFKASNILLDADFNPKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGVEQNLVEWTKPYLGDKRKLFRIMDTKLGGQYPQKGAYMAATLALQCLNREAKARPPMTEVLETLEQIAASKTVCRNNQSEQKRVHIPARKCKVQMGAH*


CDS Sequence:
>Vu_04813.1
ATGGGTAACTGTCTAGGTTCTTCGGCTAAAGTAGAAGCAGCTCACAGTTCCAGAACCCCTTCTGGAATTTCAAAGACTAGTCCTTTATCTGTTCCTTCCAACTTATCTATTCAATCATACTGTGAAGCAAGTGATGTCTCAAGTCTTCCCACACCAAGGTCCGAGGGTGAAATCTTGTCTTCCCCAAATCTTAAGGCCTTTGCCTTTAATGAGCTAAAGAATGCCACCAGAAACTTTCGCCCCGACAGTCTTCTTGGGGAAGGAGGATTTGGTTGTGTTTACAAGGGGTGGATTGATGAACACACATTTACAGCTTCAAAACCTGGATCAGGAATGGTAGTTGCTGTTAAGAAACTCAAGCCTGAAGGGTTACAAGGTCATAAGGAGTGGTTGACTGAAGTGGACTACCTTGGGCAACTTCACCATCAGAATCTTGTTAAATTGATTGGATACTGCGTGGAGGGAGAGAACCGGCTGTTGGTCTATGAGTTTATGTCCAAAGGGAGCTTAGAGAATCATCTATTTAGAAGGGGACCACAACCTCTATCTTGGTCAGTGAGAATGAAAGTGGCCATTGGCGCTGCCAGAGGACTCTCTTTTCTTCATAATGCTCAGTCTCAAGTCATATACCGTGATTTTAAAGCATCTAATATCCTACTTGACGCTGATTTCAATCCTAAACTCTCTGATTTTGGTTTAGCAAAGGCTGGCCCTACGGGTGATAGAACTCATGTATCTACTCAAGTTATGGGAACTCAAGGATATGCAGCACCTGAATATGTTGCAACAGGTCGGCTGACGGCTAAAAGTGATGTATACAGCTTTGGAGTTGTGTTGCTTGAGTTATTGTCTGGTAGACGTGCAGTTGACAGAACAAAAGCTGGTGTGGAACAGAATCTAGTAGAGTGGACAAAACCATATTTGGGTGACAAAAGAAAACTATTTCGGATTATGGACACCAAGTTGGGAGGCCAATACCCACAAAAAGGAGCTTACATGGCTGCTACTCTTGCGCTACAATGCCTAAATCGCGAAGCCAAGGCAAGACCTCCAATGACAGAGGTTTTGGAAACTCTTGAGCAGATTGCAGCCTCAAAAACTGTATGTAGAAACAACCAATCGGAACAGAAGAGAGTCCATATTCCTGCAAGAAAGTGTAAAGTGCAAATGGGTGCCCATTGA


Promoter Sequence:
>Vu_04813::LG1:69377980-69379980(+)
GAAATGACATAGGTTTAGCAAGGATAACAATGTGCATATTAAGAAAAAAAAAGAATTGAAAATGCGTCATAATAAATTAGTCTTTTCACGATAGAGATAAAAAAGAGAAAATAGATAGTAAGGAAATGACAAAATAACCTCAAAATAGGATAGGTTTCGCAAAAAGAACAATGAATGTTGAGAAAAAAAAAACAAAAATGCGTCATAATAGATGAGCCTTTTCAAGATAAAGTTAAAAAAAGAACAATAAACTTTTAAGAAAAAAAAAAACTGTAAATGACGAAAAAATCAATAAAAGAACAGTTATCGCTAGAATAGAAATAAACAATTGAAAAATTTTCACAATATTTTCTTTATTTATATACAGTAAATAATTAAAATATAAATATAAATTACTAATTAAAATAATATTTTATTTAATTTTGAGCTATATGAAACATCACTCATCTTCATCAACAAGGTGATTACCAATCTTTGTAGGATGTATATGTTTAACTTTGAATTTATAATTGTTTTTAACATATAGCTGAGTAATTTTATTTTGTTTTGAAATCACCGTTAAAGCAGTTTAAATATTTTTTTTCTTTTCTCATTCAAGATATTTTTTAAAGATAAAATTCTTAAGAAAATTTTATGACAAAATATATTTCATATAAGGAGGAATTGATTATAATAATATTACTGATAAACTTAAAATGAGAACATTAATATTTATGGGGGAAATCAATAAAAATAATATCTAGAATAAGGAGTCTTATTATGTCATTGAATAGATTTTGAGATTAAAAAATAACTATTCAAAGAGGGATAAGTTTTACTATTTAATAGGAAAGCCTTATTAGGTAATGAAATGGTTAATAAAGAGATTTTTGAAGAGTCTTGTAAGTTACGTTTCAATTATTATTTTTGTGAGGAAATTTCGTCGGCTAATTTGGATGTTATATAGCAATGGTGTTAGATTAGATTGGAGTGAAAGACAATGGAATTGGTTGTCATACGTGGTCAACTTGTCTTTGCTTAGTTGACTAAGTTGGCATCTTCCTCATGCACTCATTTCTTTAAACCTTTTATACCTTTTATTCTTTTCTTTGACATTTTGCTCAAAACAATTCTATCCTCAATTCTCTCCTTAGGTTGCAGGCCACTCACTTTCTCCTCCTAACTTTTCTTATCTTGCTTTGAACATTACATCTCATAGAATAAGGGTAGAGTGTTCAAGAGAGAACAACAAAAAAATGAGCATAATGAAGAATAACAAAAAACAATAATTTTTTGTGTTTATATAAATAATATTAATATAAAACCGTAAATAAAAAACTAATCATTTGGGTAAAATATAACACACAAAAATTGATTAGATGTATTTGTTGCCTTATGAAACCTACTAAAATTTCTAAACGACTTGGTAAACACCTTTGGGGTTAAATAAGTCTCTGGAAACATAAAACACACATATAAGGAAAATAAAGAACGAGAGTAATTTTTTAAAATGAAAATATAATAAAATTTCATAATTAGATTGATAAATTTTATTCTGAATAAAATATATCTAGTGTTTCATTTAGAAAAGGGATTGATAGTATCACTTCACTAAATTTATTTTGTGTTCCCATTTTAGTTAAAAAATTATGTTGAGTGATACTTAAGTGAAGTTTTCAAAAAGATATTGAAGTTTTAAATAAACCGGAATTTAATAAAAAATAAAAAAAAAACACATCTTTGAAATCTTCATTGGTGGAAGTCAAATCTCAAAATTATTTAATAAAAAAACATGGATTCGATTCACTCGAAATAAAAAATGATAAACTAAAAAAAAAAGTAAATATTAAACAGTGCCACGGCCAACGAGAAGATCCCATTCGCATTAAAAAGAGAAAGAGATTGGAAAAAGAGGGATAATATAGTAAATGCAGAATGTGAAGAGCCCGTAATGAGAGGGCAGTGTGTCCCCACGCGCTTCCCGTGTCTTCTTTAACACGACTTGGCTTCAATCAATCGCA


Gene Sequence:
>Vu_04813(+)
AATGTCTTATGTCATTCATATGCACTTTCTCCTCTCTTTCCGTTCCCTCTGTTTTCTTGTCAAACACAAATTCATTTCTTTTTCTTCTACCATTTTTTCCATCAAAATGTGATACAAACCCACATAAGTAAGAGGAAAAAAGAGTCACCTTTTTGTATCTTTTAAGCAAACACAAGTTTAGTGTGCGAGTTGAGTTTGTGCCAGGGGATAATGGGTAACTGTCTAGGTTCTTCGGCTAAAGTAGAAGCAGCTCACAGTTCCAGAACCCCTTCTGGTACTTTTTCTTTTTGCCTTTTCTTTTTCTGTCAGCAATTCTTCATTCGCCGTGCAATGTTTTGCAAGCTTTTAAGTTGTGATTGCAGTTGCAGTTTCATTTGCACCCTTAACATAATTGGAAATTTTGAAAAAATACTCTAGATTTAGCTGCATGTGTTAGCGATGAGGGAAAAAATTTTAAGTATCATACTGAAATCGTCATTTCCAACCACTTTCTAGAACCTTGTTTTTTTCTATGTTTTGAAGGGGTGTATGTGATTTTCCTTTGTCATTTGTCAAAGTTGGTTTTTTAAGCTATGGCTTGCATAACTGTGGGTTTGATGGAGTTGTAGATTGTGAATTCTTTGCGGTTTTCTAGCTTTTTTGTCTACTTTCTGTTTTTGGGTGCTGCAAGCTGGGTTTGTTTGGGTTAGTATTTGCTAGGATTGGGATCACTTGAACTAGGATTGTAGAATGGATGCTTATTTGTTATTAAACATTTCCTTCTGGTTGCTTATCAAATAAAAAAAAAAAAAAACATTTCCTTGTAATGCGAAAGGTGTGAACATTATCTTACATGGGTGCAGTTGGTTGAATTTTAAGATTATTAGCAAAAGTGCCTGTTTTTGTTTGTGAAATGGAAGCATAAATGGACTAACTGTTTCCACTTCTGCTTGCATCAGGAATTTCAAAGACTAGTCCTTTATCTGTTCCTTCCAACTTATCTATTCAATCATACTGTGAAGCAAGTGATGTCTCAAGTCTTCCCACACCAAGGTCCGAGGGTGAAATCTTGTCTTCCCCAAATCTTAAGGCCTTTGCCTTTAATGAGCTAAAGAATGCCACCAGAAACTTTCGCCCCGACAGTCTTCTTGGGGAAGGAGGATTTGGTTGTGTTTACAAGGGGTGGATTGATGAACACACATTTACAGCTTCAAAACCTGGATCAGGAATGGTAGTTGCTGTTAAGAAACTCAAGCCTGAAGGGTTACAAGGTCATAAGGAGTGGTTGGTAGGTGTTTTATTTCCATTTCCATGCCCTAGCTTGCTTAAGCATACTTTATATTAGAACCCTACCCTTCCCCTTCCCCTTTCCCTAAGAAAGTTTATCATATTTTGAATATTATTAATGGTCTAATTACTGGAGTTTTAATCATTTTCCAGACTGAAGTGGACTACCTTGGGCAACTTCACCATCAGAATCTTGTTAAATTGATTGGATACTGCGTGGAGGGAGAGAACCGGCTGTTGGTCTATGAGTTTATGTCCAAAGGGAGCTTAGAGAATCATCTATTTAGAAGTAAGTTATCACAACCATTACACTGTTTTCTTTTAAGTTTGGTTGATTAAGCTATTACCTTATTGGTTATGCAATCAAAGAAACTCACAGAAGGATGAAGATATCAACAATGATAGCTGGTTCCTTAATTTAAGAATGATCTTCTCCGCTATTATTATTTAAGTATGCTTTGATAAGCACTGACTTAGAAATGATCGATTAATCCATTAGTATTTTGCATTGTGATTGATGGGGCTCATTATATTTGACAGGGGGACCACAACCTCTATCTTGGTCAGTGAGAATGAAAGTGGCCATTGGCGCTGCCAGAGGACTCTCTTTTCTTCATAATGCTCAGTCTCAAGTCATATACCGTGATTTTAAAGCATCTAATATCCTACTTGACGCTGTAAGATTAATGAGTATACAAGTGATGCAATAATATCTTCATTCCTGTTATATCATGAAAAATAATTTCTTATCATTATTGAATTACAGGATTTCAATCCTAAACTCTCTGATTTTGGTTTAGCAAAGGCTGGCCCTACGGGTGATAGAACTCATGTATCTACTCAAGTTATGGGAACTCAAGGATATGCAGCACCTGAATATGTTGCAACAGGTAATTCCTTATTCCTTAGCTTTGTGTAAACTGTCGGTACGTTGCATTGCTTATAGGAATTGTTTAATGACCTATATAATCATTCGTGTCCATTTAAACATGCTGTTATTCATTTCAATTGTATGAGAATCTGCATTTTGAACTGATCAACAGTTCAATTTCTTCTGCATAGTAAACTATAAATATCTGATATAACATACTCGTGTACTTGGAGTCAGTTGGGTTAATTATTATTCTCCTTCTGAATTCTAATCCATATGTTCTAGTCAAAACAGGCAAATTTTAGATCCATTGTTTGCTATAATGCACTGCTCCTTAGGATAGAACTCGGAAACTAACCACTTTCACATGTCTCATTTTCTGCAAATCATCAAACTAAAGCTCCAATATTTTAACAGGTCGGCTGACGGCTAAAAGTGATGTATACAGCTTTGGAGTTGTGTTGCTTGAGTTATTGTCTGGTAGACGTGCAGTTGACAGAACAAAAGCTGGTGTGGAACAGAATCTAGTAGAGTGGACAAAACCATATTTGGGTGACAAAAGAAAACTATTTCGGATTATGGACACCAAGTTGGGAGGCCAATACCCACAAAAAGGAGCTTACATGGCTGCTACTCTTGCGCTACAATGCCTAAATCGCGAAGCCAAGGCAAGACCTCCAATGACAGAGGTTTTGGAAACTCTTGAGCAGATTGCAGCCTCAAAAACTGTATGTAGAAACAACCAATCGGAACAGAAGAGAGTCCATATTCCTGCAAGAAAGTGTAAAGTGCAAATGGGTGCCCATTGAACCATACTCCTACTTCATTCATTGCCATTTCAGCCATTATCTGCTTGTGTGCATCAAATTTTGAACATCTGTATATACGTTCCTTTTTTTATGCGGTTGTTTTTGAGAGGACATATTGTGCCATGAACTTCAATGAAATTTCATTTAATTATTAGCGCATGATTTCTTCGTGCAGTAGAAATTCCGCAAAGCAGTATTCTGCATGTTCAGTTATTGTTTGATTGTGGCTATTGAGATATTTGTTTGTAAAACTGTCATTGACACATTGCTGCTAGCCAAGAGTTACATCAAAACTATCCGTATC