Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_04821 LG1 69553619 69555091 "PREDICTED: single-stranded DNA-binding protein WHY1, chloroplastic-like "
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of telomere maintenance via telomerase, regulation of transcription, DNA-templated, negative regulation of telomere maintenance via telomerase, negative regulation of telomere maintenance via telomerase, regulation of transcription, DNA-templated, defense response, DNA repair, negative regulation of telomere maintenance via telomerase, DNA repair, negative regulation of telomere maintenance via telomerase, negative regulation of telomere maintenance via telomerase, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, DNA repair
Cellular Component   is active in   telomerase holoenzyme complex
Cellular Component   located in   chloroplast, chloroplast, chloroplast nucleoid, chloroplast nucleoid, chloroplast, extracellular region, chloroplast, chloroplast nucleoid
Molecular Function   enables   DNA binding, mRNA binding, single-stranded DNA binding, DNA binding, mRNA binding, telomeric DNA binding
SNP Position Effect Amino acid change
A/G 69553918 intron_variant
T/A 69553941 intron_variant
A/G 69553942 intron_variant
G/A 69554077 intron_variant
C/G 69554111 intron_variant
A/G 69554215 intron_variant
C/T 69554218 intron_variant
A/T 69554590 intron_variant
A/T 69554593 intron_variant
A/G 69554685 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_04821.1
MSNLQFQLHSQPSTLSSLSSLSSSSLKLLANHSFSPNSLPFNPPKPFSLRCRHSDLFDQNTLASSQRPTRPTASVGALPPRVYVGYSIYKGKAALTLTPRPPEFVPLDSGAYKISKEGYVLLQFAPAVGTRQYDWNRKQVFSLSVGEMGSVISLGTRESCEFFHDPFKGKR*


CDS Sequence:
>Vu_04821.1
ATGTCCAACTTGCAGTTTCAACTGCACTCTCAACCATCAACCTTGTCATCTTTGTCTTCATTATCGTCTTCTTCTCTTAAGCTATTAGCAAACCACTCTTTCTCCCCAAATTCTCTTCCTTTTAACCCTCCTAAACCCTTTTCCCTCAGATGTCGCCACTCTGACCTCTTCGACCAGAACACCTTAGCCTCCTCACAACGACCCACAAGACCCACTGCTTCAGTTGGAGCTTTGCCGCCTAGGGTTTATGTTGGTTACTCCATTTACAAAGGGAAGGCTGCGCTTACTTTGACTCCTAGGCCACCGGAATTCGTGCCGCTCGATTCAGGGGCATATAAAATATCCAAGGAAGGTTATGTGCTGCTTCAGTTTGCACCTGCGGTTGGTACGCGCCAATATGATTGGAATAGGAAGCAGGTGTTTTCCTTATCAGTGGGTGAAATGGGAAGTGTAATAAGCCTTGGTACAAGGGAGTCCTGTGAATTTTTTCATGATCCTTTTAAGGGCAAAAGGTAG


Promoter Sequence:
>Vu_04821::LG1:69555091-69557091(-)
ATATATATATATATATATATATATATATATATATATATATATAATCTTCTTTAAGATGAAGAAAATATAATTAACTAGTTCAAAGTAATTTATGTTTAAAGGTCATTATTTAAGTTCTTTTATCTTGAATAAGTTTGTGGAGATGAACTTGGAACTACAAGTGGATGATGATGGGTTTCTCTAAATCTAATTGATATATTGATTAGAAGACTATGTCTATATACTAATTAGATGAATTTATTAATAAACACTAATTAGATGAATTTATTAATAAACACTAAATGAATATGTCTATACACTCATGAGACAAGTTTAGCAATATATATTAAATAAGTTTGTCTATACATAAATTAAGTGAGTTTATTAATACACATTAGATGAGTTTGTCTACTCACTAATTAAATGAGTCTTACAATAGACATTACACGAGTCTGAATATATATTGATTACACGAGTATAACAATACATATTATATGAATGTATTCGTATACTAATTAAATAAGTCTAGCAATATATATTAGGTGAGTTTGTGGATGTATTGATTAGATGAGTCTAGTCATACACATTAGAGATTCTTTAAATATAGAAAAAAATTTGCATGAGATTGTCTATACAATAATTAGGCGACTATAACAAAAAATATTAGACAACTCATTTCATGCGTTGATTAGACGAGTATAGAAAATTATTAGGCAAGTTTATAAATACATTGATTAGATGCGCAAAGAAAAAAATATTAGACGAGTTTGTCAATGTATTGATTAAACGAGTCTAATAATACACATTAGACGAGTCGTTCAAATATTGATTAGAGAATTCTAACAATATACATTAAACAAGTCTTTCCACACATAAATTAGACAAGTCTATTAATACACATTAGAAAAATATGTTCATTCACTCATTAGATGAATCTTGAAATACACATTAGACGAGTCTATTCATACATTGATATGATCAAACGAGTCTTACAACATATATTAGACGAGTTTGTTCATACACTAATTAGACTAGTCTAACAATATACACGAGTCTGTTCATGCAAATATTAAATGAATATATTAGTACACATTAAAGGGTTAAATATGTTTTTAGTCCCTAAACTATTGACCGTTTCTGGTTTTCGTCCCTGTTCCAAAGTAAGGTACAATTTAGTCCTCAATCTTTAAAAAACGTTCGTTTTAGTCGAAAAAACGAACGTTTTGAGGACTAAAACGAGGACTAAAAACAAAATTTTGAGGACTAAAACGAACGTTTTTCTAAAGAATGAGGACCAAATTGTACCTTACTTTGGAAGAGGGACGAAAACCAGAAACGGCCAATAGTTTAGGGACTAAAAACATATTTAACCCCACATTAAACGATTCTATCCAATTTATGATTAAATGAGTCTTACAATATACATTATACAAGTTTGTCTATATACTAATTAGACGAGTATAACAATACACATTAGATGAGTGTGTTCATATACTGATTAAACGAGTCTAACAACACATATTAAACGAGTTTGTCAATGCATTAATTAAATAAATTTGACCATACATAATATGTTCATACATTGATTTGTAACAAATCAACTATATATTTTTATGTATCCTTTATACTTTTGGTGAATTTACTCTATTTTTGTACGTATTTTATTTTTTTATAAATTATTTATTTATATTTTTATAATTTATTAATTTTCTAAACTTATAAAATTAATTTTACTCAAAATTTAATTATAAATTTAAAAATATTTATTATTTTCTTTAATTTTAATTTTTCTTAATAAAGATATAAATAAACCTCCGCGTTTACGCGTGCGTTTAAAACTAACTTACATTGAAAAACAAACCCAATCAATCTAGACTAGAAGACATTTTTCCCAAAAAAAAAAAAAGGAGAATAATCTACAGGCAAACTCACAAAGACCGGGGAAGGCACAGGGTGCCAAGAGAAGCGGCAGAAACAGAAAAGATAGAGTGAGAGTGAGAGTGAGAGGGAGACGAAGGAAG


Gene Sequence:
>Vu_04821(-)
ATGTCCAACTTGCAGTTTCAACTGCACTCTCAACCATCAACCTTGTCATCTTTGTCTTCATTATCGTCTTCTTCTCTTAAGCTATTAGCAAACCACTCTTTCTCCCCAAATTCTCTTCCTTTTAACCCTCCTAAACCCTTTTCCCTCAGATGTCGCCACTCTGACCTCTTCGACCAGAACACCTTAGCCTCCTCACAACGACCCACAAGACCCACTGCTTCAGGTACAACCTCTTTTTCCACAACCCCATTTTTCTTTTTCCTTTCTTAATTGCTCCTACAAAACTGATATTAATAATAACTAGAAAAACATTTGGGTTTCTCAGAAACCTAATTGAGGCTTGATTTTTCCTATTTAAAAATCTTATTTTTAGTACTTGGGAGATGAATAAAACGTGTTTTTGTGCTATGTCTTTTGTGGACATCCCCAATAGAATTGTGGGGTTGTTACGAAATACGCAAAGGTTTTGTGTTGTGTTCTGTTATTGTAAAATGCACTTATTTGTTTTCTGGTTTAATGTGTGCTCAGTTGGAGCTTTGCCGCCTAGGGTTTATGTTGGTTACTCCATTTACAAAGGGAAGGCTGCGCTTACTTTGACTCCTAGGCCACCGGAATTCGTGCCGCTCGATGTATGTCTATTTTCGTTTTGATCCTGGCTTTGGTTGGATGTGCCATTATGGACTTGTGAATTCAGCATTTAACTATGGGGGATTTTTTGTAGTCAGGGGCATATAAAATATCCAAGGAAGGTTATGTGCTGCTTCAGTTTGCACCTGCGGTTGGTACGCGCCAATATGATTGGAATAGGAAGCAGGTGAGTTGTTATGATTTTCTGGTGATATCTACGCTGATGTTATATTTCAAAACCAAGAAGGCTTTCTTGGTTTTCGGTTGGGAGGTCTCAATTTTGTTTGGAATCTTAGTTTAAAATGGAAGAAAAAAGAGGGCAACTTTTGAAAAATGGAGTTCATTCACACTTAGGGGTAAAATGAACTTCATTCAAACTTAAGTTTGCAAAAAAAGAGTTCACTCAAACGTAGGTTTGCAAACTCTAATCTAAACATGCACGAAGTTGTTAAGTTCTCTTAGAGTATTTTATCAGTCCGTAAATAATATAGCACAATTAAGACATTGCCCAATAAAACCATATATGCCATTTGATTAGAGTTAGAGTATTATATTTTGCAGTTTAGATAGGATATGAACTGCAGAGTGCATTGCACTTAGAGTTCACAGTATTTTTAGACAAAAACCGACTTTGCTATTTTGATATGTTTGGAAGTTTTGGTATAATTTTTTTGGATTCGGTCTGTTGATATTCTCTTGTGGTTTAGAAGTGTAAATTTCTGTACTACTGTTTTTACTTGAATGCAGGTGTTTTCCTTATCAGTGGGTGAAATGGGAAGTGTAATAAGCCTTGGTACAAGGGAGTCCTGTGAATTTTTTCATGATCCTTTTAAGGGCAAAAGGTAG