Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05000 LG1 73037256 73040705 PREDICTED: cysteine-rich receptor-like protein kinase 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   systemic acquired resistance, protein phosphorylation, protein phosphorylation, protein phosphorylation, defense response to bacterium, cellular catabolic process, carboxylic acid metabolic process, cellular response to oxygen-containing compound, protein phosphorylation, systemic acquired resistance, protein phosphorylation, cellular response to hormone stimulus, response to organic cyclic compound, protein phosphorylation, cellular response to hormone stimulus, cellular catabolic process, protein phosphorylation, cellular response to hormone stimulus, response to fungus, defense response to bacterium, cellular response to oxygen-containing compound, defense response to bacterium, carboxylic acid metabolic process, protein phosphorylation, response to water deprivation, signal transduction, systemic acquired resistance, response to water deprivation, immune system process, cellular catabolic process, protein phosphorylation, response to fungus, response to water deprivation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   mitochondrion, extracellular region
Molecular Function   enables   protein kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, kinase activity
SNP Position Effect Amino acid change
A/T 73037427 synonymous_variant p.Val407Val
G/C 73037435 missense_variant p.Leu405Val
C/T 73037681 intron_variant
T/A 73037863 intron_variant
T/A 73038044 intron_variant
T/C 73038101 intron_variant
A/T 73038141 intron_variant
A/G 73038245 intron_variant
A/G 73038540 intron_variant
C/T 73038542 intron_variant
G/A 73038723 intron_variant
A/G 73038813 intron_variant
A/T 73038878 intron_variant
G/A 73038890 intron_variant
G/C 73039092 intron_variant
G/A 73039203 synonymous_variant p.Cys287Cys
T/G 73039251 stop_lost p.Ter271Tyrext*?
G/T 73039385 intron_variant
C/T 73039498 intron_variant
C/T 73039506 intron_variant
A/G 73039577 intron_variant
A/G 73039860 intron_variant
G/A 73039873 intron_variant
T/A 73039970 missense_variant p.Arg246Trp
G/A 73039986 synonymous_variant p.Asn240Asn
T/C 73040085 synonymous_variant p.Gln207Gln
A/T 73040126 missense_variant p.Ser194Thr
C/A 73040236 missense_variant p.Ser157Ile
T/C 73040487 synonymous_variant p.Gly73Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05000.1
MIPSSVSFLLLFLSVFAPSALSDPRAQRAALLCTNRTVSSLSLRQVFVTNFVAAMDALTPLTTARQHGAVVKGSGNVTVYAMGECMKDLSQSDCNVCLAQCKTQLLSCLPFQKGTRGGRLFFDGCYLRYDDYNFFAESIGDQDTTVCGNSGSINGNSNNSVGASSSHIYKANALELVTNLSEVAPKNDGFLVVSVERKNVSVYGLAQCWEFVNGSACKKCLADAATRISSCATQEGRALNAGCYLRYSAQKFYNNSTDVTISGNHGRRSLSKILAASAAAVALLLVVATVVFFIRKKIVTRRRAIAGTLGYMAPEYVIRGKLSEKADVYSFGVLVIEIVTGKRNSSFIMNSSSLLQTVWSLYGSNRLSEVVDPTLEGPFPAEEACRLLQIGLLCAQASAELRPSMSLVVKMVNHNHEIPQPTQPPFIHSGSSELSRSGLPGYNFQPGSNTQSSANTVTESLVEPR*


CDS Sequence:
>Vu_05000.1
ATGATTCCTTCTTCTGTTTCCTTTCTGCTTCTCTTCCTTTCTGTCTTCGCACCTTCTGCTCTTTCCGATCCAAGAGCGCAGAGAGCCGCTCTGCTATGCACCAACCGCACAGTTTCCTCCCTTTCTCTGCGCCAAGTTTTCGTCACAAACTTTGTGGCGGCGATGGACGCGTTGACTCCTCTGACGACGGCTCGGCAGCACGGCGCCGTGGTTAAGGGATCAGGAAACGTCACCGTTTACGCCATGGGTGAGTGCATGAAAGACCTCTCGCAGTCGGACTGCAATGTGTGCCTGGCGCAGTGCAAGACGCAGCTCCTCTCGTGCCTCCCTTTCCAGAAAGGGACACGGGGTGGTAGGTTGTTCTTCGACGGCTGCTACCTCCGCTACGACGACTACAACTTCTTCGCCGAGAGCATCGGCGACCAAGACACCACTGTGTGCGGCAACAGTGGGAGTATTAACGGTAATAGTAATAATAGTGTTGGTGCTAGCAGTAGCCATATTTATAAGGCCAACGCTTTGGAGCTAGTTACGAACCTGAGCGAAGTGGCGCCCAAAAACGATGGGTTTTTGGTGGTGTCGGTGGAGAGAAAAAACGTGAGTGTTTACGGGTTGGCTCAATGCTGGGAGTTTGTGAACGGAAGTGCCTGCAAGAAATGTTTGGCGGATGCCGCTACGAGGATTTCTTCGTGTGCAACACAAGAAGGGAGGGCGCTGAACGCTGGTTGTTACTTGAGGTACTCTGCGCAGAAGTTTTATAACAATTCAACCGATGTTACAATTTCTGGAAATCATGGACGACGGAGTCTATCTAAAATTCTGGCCGCGTCCGCTGCTGCCGTGGCTCTTCTGCTGGTTGTTGCAACGGTTGTTTTCTTTATAAGGAAGAAAATTGTGACAAGGAGAAGAGCCATTGCTGGTACGCTGGGGTATATGGCTCCAGAGTATGTTATTCGTGGGAAGTTGTCTGAGAAAGCAGATGTTTACAGTTTTGGAGTTCTAGTTATTGAAATTGTAACTGGCAAAAGAAACAGTTCCTTTATTATGAATTCATCCTCTCTCCTACAAACGGTTTGGAGCCTCTATGGATCAAATAGACTATCTGAAGTTGTTGATCCGACCCTTGAGGGTCCTTTTCCGGCAGAGGAAGCATGCCGACTACTTCAGATAGGACTGCTTTGTGCACAAGCTTCTGCAGAGTTGAGACCATCGATGTCACTAGTAGTTAAAATGGTTAATCACAATCACGAAATTCCTCAGCCGACCCAACCGCCATTTATTCATTCTGGTAGTTCAGAACTCAGCAGATCTGGTTTACCTGGATATAATTTTCAGCCTGGATCCAACACTCAGTCTTCAGCAAACACCGTGACTGAAAGTCTGGTTGAACCTAGATGA


Promoter Sequence:
>Vu_05000::LG1:73040705-73042705(-)
TTCGACATTGAGTAGTATTCTTAGGTTAATTCTTGAACGTTCGGCCTATGGTTGTGATGTGAGCGTTCGGTATTGGAGTATTAGAAATCATAGCGTTCGGATCAATATTCCTTGGAGTGGATTAAGCACCGCACGGTCAGAATGGAATTAATAGCGTTCGTTTTAGATATTCAATATTAGCGTTCGACCTATTGAATCTTATAACGTTCGTCCAATTATCATAGTAGCGCTCGACCTATTGAATCTTATAGCGTTCGCATAGTAGCGTTCAGCCTTTTGGTAATAGCGTTCGTTCTAGGTATTAATATAAGCGTTCGGCCTAATGGTGTCATCAGTGAAATAGCGTTCGGCCTGTTAAGAAATAGCGTTCGTCCTAAGTATCAATCAGCGTTCGGCCAATAGTGTTGAATCCAATATGACGTTCGGTTTTAGCGTTCGGCCTAGTGATTCAGCGTTCGGTTTTAGCGTTCGTCCAAATTGTGTTAATACTCTGAGCGTTCGTTCAATTGGCACAGTGCGTTCGGTTTATAACGCTCGGTGAATAGTGTTCGCCCATCCAATGGTCAGCAAATGGTGATGGGTTTTAAGTTCATTTCTCTTGAATTGAATTATGTGCAAAATGTTTGGAAAAGATATATTGTGATGGGATTTATGTGAATGTATGAAATACGTTGGATTTAATGTGATATTATGGAGGTATCTGGTTATTCATGACTTGGGTTAAGGTTTAAAGTAACAGTATGATTCATGAACGTAATTCCATGATCCTCAAGGAGAGGATACATGGTGGTGTTTTGGGGTTGTATAGAATGATTACATGGTAGCTCAGTTTTGGGGGTCATCCTGAATCTCCAATGGTCTTTCTTCTCATGTAGAGAGGATTGAACATGTGGTGAGGAGTAGCAGGAGGTCCTAGTCTTGGATGCTTCCATATGATCCAAGGTGAGTGATAACGGATTAACCTCGTGATTGTGGCCGGGCGGGAGTGCCCAAAAGTTCCACCAGGCGGTAGTGCCTAAGTTTCATAAGGCGGGAGTGCCAGGGCGGGAGTGCCCAAATTTCATAAAGCCACTACGAGTGCAAGACCCGCCATAGCTCGGTAATCATTCTAGTCCGGACGAGTCGGGATATAAAGTAACAAGTCTTGTGATGTCAGTTTACCATGTTTGGATGAATGTTTACATGTCATGGGAGTGTGTGAAATATGGATCAATGAGTATGCTTTAATTGTTATTTTATATGAATCTATGAATGATTGCATGAATTAACTGTGCTGTATGTATAACATGCTTTTTATATCTAGCTCACCCTTGCATTGTTTGTGTTATGTGCTGTTTGGGTATGTTTCTTTGGCGATGATCATCCACTTGGATGGGAGCAGATGACGGAGAGGATACTTTGGAAGCAGCCCTTGATGGAGACGGAAGTGCTGCAGCTTAGATTAGCTAGTATTATTTCGAAATTCTTAATGTTTGGAAGAACTCGTGTGCGTTTTAAGTTTTAAATTCTCCGTGATTTTCATGGAGAAATTCTAATACTCTTGTTGTCAATTCCGCACTATTATGAGGATGACTGTAATCCTTAAATTACTCTTGACTGCTTTCCTATATTATGCATGACGACGTCTTTATTATATATGAATGATGTATATAATTGGGACGTTACAAGTATCCTTGCCAACGAAAATAAATTATTATTCCTTGAAGTAAGATCAGGGTTAAATTATTTATTGTAAAAAGGTGTGAAAGTGACAGAGATGCAAGTTTAGGAATAAAAGAAAGCAATAATGAAAAATGAAGTAGTAAGATGGATAATCATAGTATCCAAAGAATTATTAATCCATCTAATCCGCCATTAATATCATAGCAACTATATTTATATCTTCTTATCAGCCACTCTGTTCTTCGTCACCTACTATTTTATTTTCTCCCAAAACACCAACTTGCAGTGCAAGTTTATACATCAACAAAATCCAGAGAAAAAACAAAAAACTTACCTCA


Gene Sequence:
>Vu_05000(-)
ATGATTCCTTCTTCTGTTTCCTTTCTGCTTCTCTTCCTTTCTGTCTTCGCACCTTCTGCTCTTTCCGATCCAAGAGCGCAGAGAGCCGCTCTGCTATGCACCAACCGCACAGTTTCCTCCCTTTCTCTGCGCCAAGTTTTCGTCACAAACTTTGTGGCGGCGATGGACGCGTTGACTCCTCTGACGACGGCTCGGCAGCACGGCGCCGTGGTTAAGGGATCAGGAAACGTCACCGTTTACGCCATGGGTGAGTGCATGAAAGACCTCTCGCAGTCGGACTGCAATGTGTGCCTGGCGCAGTGCAAGACGCAGCTCCTCTCGTGCCTCCCTTTCCAGAAAGGGACACGGGGTGGTAGGTTGTTCTTCGACGGCTGCTACCTCCGCTACGACGACTACAACTTCTTCGCCGAGAGCATCGGCGACCAAGACACCACTGTGTGCGGCAACAGTGGGAGTATTAACGGTAATAGTAATAATAGTGTTGGTGCTAGCAGTAGCCATATTTATAAGGCCAACGCTTTGGAGCTAGTTACGAACCTGAGCGAAGTGGCGCCCAAAAACGATGGGTTTTTGGTGGTGTCGGTGGAGAGAAAAAACGTGAGTGTTTACGGGTTGGCTCAATGCTGGGAGTTTGTGAACGGAAGTGCCTGCAAGAAATGTTTGGCGGATGCCGCTACGAGGATTTCTTCGTGTGCAACACAAGAAGGGAGGGCGCTGAACGCTGGTTGTTACTTGAGGTACTCTGCGCAGAAGTTTTATAACAATTCAACCGATGTTACAATTTCTGGAAATCATGGTCAGTTGTACCTCTCTGTCTTTTCCACGTCGTTTTCCTTTGATTTTATTGATGGTGTTGGATTTTAGTTAGCTTATTATGATTGATTCTCCCATCCTAGTTAGCGTTCCTCTGATTTTGATGTGGATTAGAATGCATTTTCGGTGCCGTATATGACAATATAAATAAGGATTTAAATTGAGGTTGCGGTCACACTTTTGTCACCGTCCTTGATATTTGCGACAAATTTGGTCATGTTTTGAGTCTATGATACCTTAAAACCTTGATGTTGCTCAAATTTAGGTTATATACCATTTTGTAAACCATTGATTGTGAAAAATTGCAGAACATGTTGTTGAATTGATCACGGATCATTTTGCTGAAACCTGGAAGACTCAAACATACCATATATGCAGAATTTTATGTAGATATGTTTGCTTATTTTGTTCCATTGAGTGGTTTTCAAAAGGAGGGATTTATTGTTCAGAGTAATTTTGGGTGGATCGTTTGTCCTTGATGTATGTTTTCTTATGGAATTTAACTATCTTGTTAATTTTAAAATAGGCATTATTGTGAAGAAATAAAATACCTACAGAAATCACCTTTCTGATAAAATATGTCACTAAAGCTGTAAAGCTGTTTTGCTGGCATTTAATGTTAGGACGACGGAGTCTATCTAAAATTCTGGCCGCGTCCGCTGCTGCCGTGGCTCTTCTGCTGGTTGTTGCAACGGTTGTTTTCTTTATAAGGAAGAAAATTGTGACAAGGAGAAGAGGTATCAATATTTGATATTTAGGACTGAGATTATTAGAATGTTAATACTGAAAGTTTTTGAATTCTTCTTACCTCAGAAAGAAGACAGTTTGGTGGCTTTCTCGACAGAGTGAATAAGTCCAGGCTAAATATGCCATATGAGATTCTTGAAAAGGCAACAGATTACTTCAATGATGCCAATAAGCTAGGACAAGGGGGGTCAGGTTCTGTTTATAAAGTATGTATTTTCTGAGCTTATGTTTTATTATCATTTTGTACAAACTAATCGTTGCTAACATTTTGCTGCAAATTAGGGAGTTATGCCAGATGGGATTACTGTTGCCATAAAAAGGCTAAGATTCAATACAACACAATGGGTGGATCATTTCTTCAATGAGGTCAATTTGATAAGTGACATTCAACACAAAAATCTTGTAAAACTTTTAGGATGCAGCATTACAGGACCTGAAAGCCTTCTTGTTTATGAATATGTGCCTAATCAGAGCCTCCATGATCACCTTTCTGGTTGTAACTTTATCTCTGATGTCCAGTCATAAACAAAGTTCCTTTCTTTAAAAGAAAATTTTCTTATCATATATCCTATGAATTTCTCCAGTTAGAAGAATTTCTCATCCGCTGAGTTGGGAATTCAGGCATAAGATTATATTAGGAATTGCAGAGGGCTTGGCCTACCTTCACGAGGAATCACATTTGAGAATCATTCATAGAGACATAAAATTGAGCAACATTCTACTTGAGGAGGACTTCACACCAAAGATTGCTGATTTTGGACTTGCTAGATTGTTTCCAGAAGATAAGTCTCACATTAGCACAGCCATTGCTGGTACGCTGTAAGTGCATGACCCTCTTCTGCATCTTATGTTATTCTGTGTGTGCCATCAATGAGCGAAATATCTTGCACAGACCTTAGATAAGTAGAAGGTGAATTTTCGTTATACTGGATGCCTTCTGTTAATTATTTCTTTATAATGCATACTACTTACTAGCTTTGTGAAAGACCAATTGATTGCTATGTTGCATTCTATAATGACATTTTTTTATCTATTCCGCATTGTATTCCAATAATTCCTCTGTCTACATAAATGGTTGATTCTTTTCTATGCACTCTTAATAATCTTTGCGTCGCTGTGTGGGGTTTGTATTAACAATCATATTTTACACTCCAAAAATTCATGGTTGAGGAGCACTTCTACATCTTATGTTACAAAGGATATATACTTGAACCCTTTAGCTGACTTCTGGATCCTAAAGATTTGAAACATGATTCATATATTGTTCCTGCATGATTCACTTACATTTGATCATGTGTTCGTATTAGGGGGTATATGGCTCCAGAGTATGTTATTCGTGGGAAGTTGTCTGAGAAAGCAGATGTTTACAGTTTTGGAGTTCTAGTTATTGAAATTGTAACTGGCAAAAGAAACAGTTCCTTTATTATGAATTCATCCTCTCTCCTACAAACGGTAATTGTTTTCGTCTGGCATGTTGCTACGGCATACTACTTCATTTAATGATTTTTAACAAGACAAGCATTCTCATAAGTAGAATCCCTTGGTTGATGATCATTGTACAAGGTTTGGAGCCTCTATGGATCAAATAGACTATCTGAAGTTGTTGATCCGACCCTTGAGGGTCCTTTTCCGGCAGAGGAAGCATGCCGACTACTTCAGATAGGACTGCTTTGTGCACAAGCTTCTGCAGAGTTGAGACCATCGATGTCACTAGTAGTTAAAATGGTTAATCACAATCACGAAATTCCTCAGCCGACCCAACCGCCATTTATTCATTCTGGTAGTTCAGAACTCAGCAGATCTGGTTTACCTGGATATAATTTTCAGCCTGGATCCAACACTCAGTCTTCAGCAAACACCGTGACTGAAAGTCTGGTTGAACCTAGATGA