Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05330 LG1 79995219 79996398 PREDICTED: transcription factor bHLH95-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   seed dormancy process, regulation of abscisic acid biosynthetic process, embryo development ending in seed dormancy, endosperm development, seed dormancy process, embryo development ending in seed dormancy, embryo development ending in seed dormancy, regulation of transcription, DNA-templated, seed morphogenesis, regulation of abscisic acid biosynthetic process, regulation of abscisic acid biosynthetic process, embryo development ending in seed dormancy, regulation of abscisic acid biosynthetic process, endosperm development, endosperm development, embryo development ending in seed dormancy, regulation of transcription, DNA-templated, seed morphogenesis, regulation of abscisic acid biosynthetic process, endosperm development, embryo development ending in seed dormancy, seed morphogenesis, seed dormancy process, embryo development ending in seed dormancy, regulation of transcription, DNA-templated, seed morphogenesis, seed dormancy process, seed morphogenesis, regulation of transcription, DNA-templated, seed dormancy process, seed morphogenesis, seed morphogenesis, seed dormancy process, seed morphogenesis, embryo development ending in seed dormancy, embryo development ending in seed dormancy, seed dormancy process, embryo development ending in seed dormancy, seed dormancy process
Cellular Component   located in   nucleus
Molecular Function   enables   protein dimerization activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/A,C 79996272 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05330.1
MLFMSEDQSLLHDTNLLWEKTNSQKQKNEKVEGLMNKKRNRELNKVSSAEGNAEKSRESDHEMHIWTERERRKKMKNMFASLHALLPHLPSKADKSTVVDEAVSYIKNLETTLEKLEKQKEERVRCGPTFWNESSPSMFTARGLSSNYGFSNAIMGTSSNALLFPAQQQPVAFDKTWASSNMVLNVCGDEAQFCICAAHKPGLVSTIVFVLDKYKIELVYAHISCLGNGNAIMIQAHGKRASHQFLDANSVEEIYRQAAGEILLWIA*


CDS Sequence:
>Vu_05330.1
ATGCTCTTCATGTCAGAAGATCAAAGTTTGTTGCATGATACGAACTTATTGTGGGAAAAAACGAATTCACAAAAGCAGAAGAATGAAAAGGTCGAAGGTCTCATGAATAAGAAGCGAAATCGAGAGCTCAACAAAGTTAGCAGTGCAGAAGGAAATGCTGAAAAGAGTCGCGAATCTGATCACGAAATGCATATATGGACTGAGAGAGAAAGGAGAAAGAAAATGAAAAACATGTTCGCTAGTCTTCATGCATTGCTTCCCCATCTTCCTTCTAAGGCGGATAAATCAACGGTCGTGGATGAAGCAGTGAGCTACATCAAAAATCTTGAGACAACCCTGGAAAAGCTTGAGAAGCAGAAAGAAGAAAGGGTCCGATGTGGGCCCACGTTTTGGAATGAGTCATCACCGTCCATGTTCACTGCTCGGGGACTTTCTTCTAATTACGGCTTTTCGAACGCGATTATGGGAACTTCTTCAAACGCACTTTTATTCCCTGCACAGCAGCAGCCCGTAGCTTTTGATAAAACGTGGGCCTCTTCAAACATGGTCTTGAATGTTTGTGGAGATGAGGCCCAATTCTGCATTTGCGCGGCCCATAAACCAGGTCTCGTGTCCACCATAGTTTTTGTGCTTGATAAATACAAGATAGAGCTTGTATATGCCCACATTTCGTGCCTTGGGAATGGAAATGCAATCATGATTCAAGCTCACGGAAAACGAGCTTCACATCAGTTCCTGGATGCAAATTCAGTGGAAGAAATTTACAGGCAAGCTGCCGGAGAGATTCTTCTATGGATCGCTTAA


Promoter Sequence:
>Vu_05330::LG1:79993219-79995219(+)
ATACTATTTATATATAAATAATATAAATAGTATTTTATATATAAATATATAAAATTACATAATTAACTATAATATAATTTTTATATACCGTTAATTAGGATGTATTATATGATTTTAATAAAATTTAATAACAAAATATTTTATAATTTATGGAACACAATTTTTTATAATAATTTGGTAATAAAAATAATATTTAACTCTTATAACTATAAAATAGTTTAAATCTATATTTATTAATTTGATGGTATGAGATTGAGTTAAATTTAATTGTTTTTATAATATCAAAGTTTATTTTAATAGTATTTCTTAGATATAGGTTTTATGGCTTAATATGAAACTCTCTAAGTAGAATGTAAATATTATTATCTTATAAACTTATTTCTAAAGTTGAATTGCTCTTAAATAAAATTTTCAATATGATGTTAAAATTTATCTTAATAAAATTTATTCGAACCCTTATATCTTCTATTATGACATCTTGATTATGATTTGTGAAGTTAGATTCTCACGGACAATATATAAATAAAATACGAATATTAGTTACTAAACTAATAGTTTTATGATATTGAATTAAAATTAAAGTTCACAATTCAATATTTTATTTTATTTAATGTTTATATATGAGTTACTCACATAATGGCAACAAACTGCATCAAAATCATGATTACTTTTTAAAAATAACGTTAGCATCTTTTTCTCTAATCAGGAAAGTTAAGATTGTATTCATTACCTAATACGTAAATTTCTGTCCAAAAACACCATCATTTGCACTTGCAGATAAGAACAAAATTTGTTACAGGAGATATTATTTAATCATTGAAAGATAATATAAATAATTTGTTAAATAAAGTTGATCAGTTTAGATTTTCTAAAGTAACGCAAATAAGAAGCACTAAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAACAAGTACAGATGTGAATATCTTAATTCAAAAGAGATTGTTATTTAACTCCTAAAATGTGAGTTTCAATATATTTTTTTATATCTGTGAACTGGATATGTATTATTAATAGGTCAGAACTAATGTTTAAACTATACATAAATCATTCAGTTAAAAACGCGTGCCATTATCATTTATTGATACAAATATTTATCATATAAAAGCTGTAAAGCTCATTAATTATTTACTTTTTTAGAAAGAAGAATTTAATGGGATGCATATTTATTAGGATTTGAACGCACTAAAGATCATAAACATGTTTCTTCACTATTTATCAAAACCAATAAATGTTTTTTTACTAAACTTTTTTATTAAAAATCAATTGTTCACAATAAAACCTGTAATTTTAATGAAAATTATGAAACCATTTTTTTAACATTTAAGTGATTTTTATTATGTGCGTATATAAAAATTAGTATATTTGAGATAAGAGTTTTGAGAAAAATGTCTTTTGCTATCATAAATGTTAATCTTTCGAAAATTACCATTATAAGTAAATGAAAAAGCACCTAAATGAAAAACAAAATATCCAATAAAGAAAAAATAATTTATAACCTCTTTACACCTAAAAGATAAATTGTTATTGGCTTCATTGACGCCAAAGTTTATTTACATCTCTCAATAATAGATATAATATAATTTATTAAAATTGCATTTATATCAGCAAAAATTAAATTACACACACACACACACACACATATATATATATATATATATATATATTAAAGAATGAAATAAATTAAATGAAAGTGTTTCTAAAATCATGGTAATTAACATATCTAACAGGAGCCTGAGGTATAGTATTTTAGCATAATTATGATGTTAATATATTTGTTGTGAAGCAAAGTAACTGCATTGTGTTATGGTTAATCATCATCATTCATATCTCTCTTGCATCTTCAGCTGTAAGCTCTCTCTCTCACTTGTATATAAACGTGTCTTCTCCATTCTTCTGCTTATCAAATCTGCTCTTAATTTTTTTCTTCTCTCTCAATCTGTCA


Gene Sequence:
>Vu_05330(+)
ATGCTCTTCATGTCAGAAGATCAAAGTTTGTTGCATGATACGAACTTATTGTGGGAAAAAACGAATTCACAAAAGCAGAAGAATGAAAAGGTCGAAGGTCTCATGAATAAGAAGCGAAATCGAGAGCTCAACAAAGTTAGCAGTGCAGAAGGAAATGCTGAAAAGAGTCGCGAATCTGATCACGAAATGCATATATGGACTGAGAGAGAAAGGAGAAAGAAAATGAAAAACATGTTCGCTAGTCTTCATGCATTGCTTCCCCATCTTCCTTCTAAGGTCAAATATTTTCAATCGGATTCGTTTTCATTCTTAGGTTACTTCGTTTCCCTCTTTCTCTAAGGTGCTTCGGTGTTCGATCATGATTTTGCAGGCGGATAAATCAACGGTCGTGGATGAAGCAGTGAGCTACATCAAAAATCTTGAGACAACCCTGGAAAAGCTTGAGAAGCAGAAAGAAGAAAGGGTCCGATGTGGGCCCACGTTTTGGAATGAGTCATCACCGTCCATGTTCACTGCTCGGGGACTTTCTTCTAATTACGGCTTTTCGAACGCGATTATGGGAACTTCTTCAAACGCACTTTTATTCCCTGCACAGCAGCAGCCCGTAGCTTTTGATAAAACGTGGGCCTCTTCAAACATGGTCTTGAATGTTTGTGGAGATGAGGCCCAATTCTGCATTTGCGCGGCCCATAAACCAGGTCTCGTGTCCACCATAGTTTTTGTGCTTGATAAATACAAGATAGAGCTTGTATATGCCCACATTTCGTGCCTTGGGAATGGAAATGCAATCATGATTCAAGCTCACGTAAGTTTCAAACTCTTATGCACTTTTCATTTATTATTTCTGTAGAAAACTAAACGTTTATAATTATTCACACGCAATTTCCAAATTATTAAAAATGATTTTTTTTTTAAATTTATTAATTACTGTAGCTTTAATAAAAAAAAAAAAAGAGTCACGCATTCACACATTTACTTTAAAAGAATTCAACATTTTTCTTATACTTCTTTTTTCTAATACACAAGCATTCTATATTAACATGAAATTAGGGTTACTTTAACTTATATGAAGTTTTTGATGATTCAGGGAAAACGAGCTTCACATCAGTTCCTGGATGCAAATTCAGTGGAAGAAATTTACAGGCAAGCTGCCGGAGAGATTCTTCTATGGATCGCTTAA