Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05503 LG1 82507768 82510104 PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   trichome branching, defense response to fungus, protein autophosphorylation, protein autophosphorylation, defense response to fungus, protein autophosphorylation, trichome branching, defense response to fungus, trichome branching
Cellular Component   located in   nucleus, nucleoplasm, cell periphery
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein binding
SNP Position Effect Amino acid change
G/T 82507800 missense_variant p.Leu467Ile
T/G 82507877 missense_variant p.Asn441Thr
T/A 82507901 missense_variant p.Glu433Val
A/T 82508334 intron_variant
A/C 82508340 intron_variant
A/G 82508401 missense_variant p.Ile367Thr
T/C 82508950 intron_variant
C/A 82508964 intron_variant
G/T 82509162 missense_variant p.His214Asn
A/G 82509163 synonymous_variant p.Asn213Asn
G/A 82509294 missense_variant p.Arg170Trp
C/G 82509690 missense_variant p.Asp139His
T/C 82509859 synonymous_variant p.Gln82Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05503.1
MEKVEKKGKETKEKKWTRKLELPSIMGNPKKEVACDDDVLASPRDVFGVPVSGTDSDSTGSSNYNGLGSPGVVSNRCLRDPQNQQWKTMIDVLRFKSVRRFSTIPLLGASYEISRRSLRNKLARIRPANDDDDLDSCIDIDGIATKPSWRNFNYADLVAATDDFNPENMIGKGGHAEVYKGCLPDGRVVAVKRLMRNEKDIEDTVGDFLSELGIIAHINHPNATRLIGFGIDQGLYFVLQLAPHGSLASLLFGPQCLEWTVRFKVAVAVAKGLQYLHHDCPRRIIHRDIKASNILLNDNNEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPLLDAKLVQELVDPRLGANYDLAEMKCCMETASLCIHHMSSKRPYMDLVVQLLKGEEVPVELNHNSPTPRSLLIDACDLEDYTCSNYLNDLNRHRQLLME*


CDS Sequence:
>Vu_05503.1
ATGGAGAAAGTAGAGAAAAAGGGAAAAGAAACCAAAGAAAAGAAATGGACGCGGAAACTGGAGTTACCGTCGATAATGGGGAACCCGAAGAAAGAGGTTGCATGCGACGACGACGTATTGGCGTCGCCGAGGGATGTATTTGGGGTTCCCGTTTCGGGGACGGATTCGGACAGCACGGGGAGCAGCAACTACAATGGGCTTGGATCGCCCGGAGTGGTCTCAAATCGGTGCCTGAGAGACCCGCAAAACCAGCAATGGAAGACGATGATCGACGTGTTGAGGTTCAAGTCCGTTAGAAGATTCTCGACTATTCCTCTGCTTGGGGCGAGTTACGAGATCTCGCGCCGGAGCCTGAGGAACAAGTTGGCCCGTATTCGACCTGCCAATGACGACGATGATTTGGATTCTTGTATTGACATTGACGGCATTGCCACCAAGCCTTCTTGGAGAAACTTCAATTACGCTGACCTCGTCGCTGCAACCGACGATTTCAACCCTGAGAACATGATCGGAAAAGGTGGTCATGCTGAAGTCTACAAAGGATGCTTACCTGATGGTCGAGTTGTAGCAGTTAAGAGGCTAATGAGGAATGAAAAGGACATCGAGGATACAGTTGGTGATTTCTTGTCAGAGCTTGGAATCATTGCTCACATTAACCACCCAAATGCAACACGCTTGATAGGGTTTGGGATCGACCAAGGTCTCTATTTTGTTCTACAATTGGCCCCACATGGCAGCCTTGCCTCTCTGCTCTTTGGACCTCAATGTCTGGAATGGACTGTAAGGTTTAAAGTAGCTGTTGCGGTTGCAAAAGGATTACAGTATCTCCACCACGATTGCCCGAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATATTACTCAACGACAATAATGAAGCTGAGATATCAGACTTTGGATTGGCAAAGTGGCTCCCAGATAAATGGGCTCACCATGTTGTCTTCCCAATAGAAGGCACATTTGGGTATTTAGCTCCGGAGTACTTTATGCATGGAATAGTTGATGAGAAGACTGATGTTTTTGCATTTGGGGTTTTGTTACTCGAGCTTATAACAGGGCGTCGAGCAGTTGATTCCAATAGCAGGGAAAGTCTTGTGATCTGGGCCAAACCACTTCTGGATGCAAAGCTGGTCCAAGAATTGGTAGACCCCAGATTGGGAGCTAATTATGATCTGGCCGAAATGAAGTGTTGCATGGAAACGGCTTCCTTGTGCATCCATCACATGTCCTCTAAGCGGCCATACATGGATCTGGTTGTGCAGCTACTGAAAGGAGAAGAAGTGCCAGTAGAACTCAATCACAACTCACCTACTCCAAGATCACTCTTGATAGATGCATGTGACCTGGAAGATTACACCTGCTCTAACTATTTGAACGACCTCAATCGCCACAGGCAATTACTCATGGAGTGA


Promoter Sequence:
>Vu_05503::LG1:82510104-82512104(-)
TGAGATAACATGTTGATAACTTTGACCTTTGATGACTATTTTAATCATAACTTTTTCCACAGACCTCTAAATGATGTGATTCTTTTTTTATTAGAAAATAGACTCAAAACTCTTTCCAATGACTACTAATTTTGTGATTTTTGGACATATGAGTAGGTGCAGTTAATTCCTTAAAGTTAACGTTTTATACATTCCTGCCACCTCTGACCTTTACTGGTTGTTTTGCTCATAACTTTCTTCACCGAACTTCAAATGAGTTGATTCTTGTTTTGTTGGAATCTATACTCAAAGACCTCTCAAATTATGCCTTGATTATCAAGTGTATGCCTTTTTGGCCTTTGTAATCGATTACAAGGACCCTATAAACGATTACACGAACAAAAATATGGTTTTGTACAAAAACTTCTGTAGGAGCCAGTTGTGGGCACATAAGTAGCCAAAGACATTTTACGTAATTTTTTCATATTTTTGAATGGATGAGGCTTTTTTTAGTGTTTAAGTTTGAGTAGAGCACCTATATATATGGTCGAACAAGGTATGGTACTAGATCAAAATTGAAATTTTATTGATATAATATATTATCAGTACATATTACCCAACATTTATAATCATGATTTTCAATTGAGGGGAAGACCCGTGAGAGTGAAAGCAATGTTCAAGACAAAGTGAAAATGGTGGGGAGAGACAAAGAAGAGGAAAATGCCATCAACCCGAAAACAGGAACACACGAAGGCGAAATTTCTTTCGATAGACAGAAAAACCCGCGAGAATGAAAGCAATGCTCCACAGAAAGTGAAAATGGTGAAGAAAGACGAAAAAGAGGAAAATGAAAATGGTGGAGAGAGAGGAAGTCTCAAATGAAACTGTAAAATGAAGAAAAAAAAAGTCTCAAATGCCTTTCCAAAAATACCCTCCATGACAAAATGCACTCTCTTAATAAAATATTACAAACTAACCAATAAAAAAGCACCACATGTTGTTTGTTGTCAAAAAGTTGGCAACTATAGTCAAAAAAACGTTTTCCATAAATAAATTATTTTTTCTATTTAGATAACGTTTTAAAAGGTAAACGTTATTAAGATTTTGTTCTATTTTCCTACCTGTAACTTGTGATACTATTTCACCATATTTCGTGCTATATTTTACTATTCCTGAGTATGATTAAAATTTCATGTTGATATTACTATAATATAAATATATCATCTCATGTTCACGTTGATTAAGATTCATAAAATAAATGTTAAATAAACCAACTAGTAATTATTATCTTAGTCTCCAAACTTGACAAATTTATGTAATAAGGTGATACAAATAATGATAGTTTTAAGATTTTTCTTTTTTCAGTTGAATACTTTCAGAGCCTAAAATGAAAGCTTAAGGTAAGTGAAAATGATGATGAGGCTACGTGCATATTGTTACATGGCTTTGGTGCGTTATGTGTCGAAAAACAAAAACATAAAAAGAAACGTAGAATGACATAAGATAAATGCATAAATATAGTAAAGATTCGAAACATCCTGATGAGCTGGTATGGTCTCCTCCTCCTCCTTCCAAGAATAACCACCGCTCAAAGATATACCAATTTTGAATTACACCACCTTCTTCTCTCTTATCCCCGCTGCTCCAATCCACCACTCCACGCCCTCATCAGAAGGAAAAATGAGGTAAGGAATTTTCAGCGTTGAAATTCTCCACCCTTTTTCTTTTTTTTTCTGGTGAGGGCGTGATCACCTTCATCCACTTCGAATCTTTCCAGTAAACCCTTCCAGGGGGAAACTAACACAACCAACCATGCCTCCTTGACAACCCTAACCTTAATTCCTTCACCCTGTCAACTTCCTCTTCAACAAAGTACGCCATATGGCGATTACATTCCGATAAAATCAACATAGAAATAACTGCAAGCCTTTCCTCGAAGAAAACAAGACCGTGCAACTGTCCGTACGAGGTAGAGGTTTGTTTTCTTTTTTTGTTTTATTGCTGTTGTTATTATTATTTAG


Gene Sequence:
>Vu_05503(-)
ATGGAGAAAGTAGAGAAAAAGGGAAAAGAAACCAAAGAAAAGAAATGGACGCGGAAACTGGAGTTACCGTCGATAATGGGGAACCCGAAGAAAGAGGTTGCATGCGACGACGACGTATTGGCGTCGCCGAGGGATGTATTTGGGGTTCCCGTTTCGGGGACGGATTCGGACAGCACGGGGAGCAGCAACTACAATGGGCTTGGATCGCCCGGAGTGGTCTCAAATCGGTGCCTGAGAGACCCGCAAAACCAGCAATGGAAGACGATGATCGACGTGTTGAGGTTCAAGTCCGTTAGAAGATTCTCGACTATTCCTCTGCTTGGGGCGAGTTACGAGATCTCGCGCCGGAGCCTGAGGAACAAGTTGGCCCGTATTCGACCTGCCAATGACGACGATGATTTGGATTCTTGTATTGACATTGACGGCATTGCCACCAAGCCTTCTTGGAGAAACTTCAATTACGCTGACCTCGTCGCTGCAACCGACGATTTCAACCCTGGTATGAATCAACGCCAAATTATGCATCCCTTTTCGTTTTCACTTTTCAATTTATGCACGTTCTTTCTTCACACTTTAAAGGTTATTTGATGCCAAACTTAATTTATGGTATTTTCGGCTGCGTCTTCATAGAGTTGGTTAAGAAATGCTTGAAAAAAATTTGGTTTAATTGAGCGTTAGATATGTAATATAAATAAGTACTTGGTACGTTTTCGCTTACATATCATCATTATTTCACAGATTTTTACACGTTTTTGGATATTGGATATTGTATGCGCATGTTTATATTTGTGTTTATGCAGAGAACATGATCGGAAAAGGTGGTCATGCTGAAGTCTACAAAGGATGCTTACCTGATGGTCGAGTTGTAGCAGTTAAGAGGCTAATGAGGAATGAAAAGGACATCGAGGATACAGTTGGTGATTTCTTGTCAGAGCTTGGAATCATTGCTCACATTAACCACCCAAATGCAACACGCTTGATAGGGTTTGGGATCGACCAAGGTCTCTATTTTGTTCTACAATTGGCCCCACATGGCAGCCTTGCCTCTCTGCTCTTTGGTGCAGCTCTATGCCTCTATCTCCCACTTCTCATTTCATCTCTTCTATTTTCAAGCATAGACAGACTCCCTATATGAATAGTGTTAAGGTTACATGACTAATAAAAATGACACGTAATATTTCAGGACCTCAATGTCTGGAATGGACTGTAAGGTTTAAAGTAGCTGTTGCGGTTGCAAAAGGATTACAGTATCTCCACCACGATTGCCCGAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATATTACTCAACGACAATAATGAAGCTGAGGTACTTTGTGTCAGTCTACAATGTACTATTGTGTACTTGATCTTTGTTTTGTGGAAAGGTAAAAAATTTCTTGTGATAAACTGCAGATATCAGACTTTGGATTGGCAAAGTGGCTCCCAGATAAATGGGCTCACCATGTTGTCTTCCCAATAGAAGGCACATTTGGGTACGCATTGCAGCCTTTGTTTTAATTTGCATATTTTCTTCTCATTGCAACTCCATTTACTGAGAAGCTGCATGATCAATGGCTACAGGTATTTAGCTCCGGAGTACTTTATGCATGGAATAGTTGATGAGAAGACTGATGTTTTTGCATTTGGGGTTTTGTTACTCGAGCTTATAACAGGGCGTCGAGCAGTTGATTCCAATAGCAGGGAAAGTCTTGTGATCTGGGTAAGTCCTGATAAGCTAGCTCTACTCAAATCCTTGTCTCCTTCACCTTCTCTCCAATCTTCTGCATTACTTTCAACTAAGATTCATAATTAGGGAAGACCGGATTACAAAAAGTATATGTTGCATATGCTAATAACTTTAGAGACAGAGACTGACCAAGTTGTGCTTTGATCAGGCCAAACCACTTCTGGATGCAAAGCTGGTCCAAGAATTGGTAGACCCCAGATTGGGAGCTAATTATGATCTGGCCGAAATGAAGTGTTGCATGGAAACGGCTTCCTTGTGCATCCATCACATGTCCTCTAAGCGGCCATACATGGATCTGGTAAACAAATGAGAACTCTTCCTCATTCATATCGTGTCACTGATTGCAAGTTATAGAATGACATGCCTCATTGATTTTTGGGGGATACTTAATGAGACTTGTCTCTTCGGTAATATATATATCAGGTTGTGCAGCTACTGAAAGGAGAAGAAGTGCCAGTAGAACTCAATCACAACTCACCTACTCCAAGATCACTCTTGATAGATGCATGTGACCTGGAAGATTACACCTGCTCTAACTATTTGAACGACCTCAATCGCCACAGGCAATTACTCATGGAGTGA