Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_05924 LG1 87952950 87956688 PREDICTED: acidic leucine-rich nuclear phosphoprotein 32-related protein isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   macromolecule catabolic process, negative regulation of metabolic process, cellular nitrogen compound catabolic process, aromatic compound catabolic process, macromolecule catabolic process, cellular nitrogen compound catabolic process, aromatic compound catabolic process, aromatic compound catabolic process, organic cyclic compound catabolic process, heterocycle catabolic process, heterocycle catabolic process, heterocycle catabolic process, cellular nitrogen compound catabolic process, organic cyclic compound catabolic process
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   histone binding
SNP Position Effect Amino acid change
T/C 87953077 3_prime_UTR_variant
A/C 87953258 3_prime_UTR_variant
G/A 87953302 3_prime_UTR_variant
A/T 87953303 3_prime_UTR_variant
T/A 87953557 missense_variant p.Glu435Val
A/T 87953603 missense_variant p.Leu420Ile
T/C 87954138 intron_variant
A/T 87954140 intron_variant
A/C 87954240 intron_variant
C/T 87954952 intron_variant
T/C 87954989 intron_variant
T/C 87954990 intron_variant
C/T 87954999 intron_variant
A/T 87955057 intron_variant
A/G 87955119 intron_variant
G/A 87955321 synonymous_variant p.Gly332Gly
A/G 87955363 synonymous_variant p.Phe318Phe
C/T 87955368 missense_variant p.Asp317Asn
C/A 87955374 stop_gained p.Glu315*
T/A 87955558 missense_variant p.Glu253Asp
G/T 87956204 missense_variant p.Ala38Asp
C/T 87956205 missense_variant p.Ala38Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_05924.1
MRHRISYLMDEIWERAVETALDGEKDHASARTLTLDGAVKCVQGRLPPPTLLERFQNLQHLSIANVGVSTLEQFPRLRNLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEEEEEEEEEDDPGSGEIDGEEDRPHGINNGHSEGVDGVVDADEEEESDADEEETETSRRVTNGDNHRENGFRVVPVEGDDVEEDDDEDDSGEEIDEEEGDDDDVVEVHEIEDSDDEDGVEYDEDDDDDDDDEEEVDNDEGDFAEPESTGRLTSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEDDGDFEDDDEEEDYGGGYLVQPVGQSDALNSGVVADVDGGNDEGEEEDEVDDDDEDVQVLPPDSSHLKRKRNDEEEDDEESDDEDVVAFTKSSKKHH*


CDS Sequence:
>Vu_05924.1
ATGAGACATAGGATTTCCTATTTGATGGACGAGATCTGGGAGCGGGCTGTGGAGACCGCCTTAGACGGCGAGAAGGACCATGCGTCCGCCCGGACGCTAACCCTAGACGGCGCCGTTAAGTGCGTGCAGGGACGCTTACCTCCTCCGACCCTACTTGAAAGGTTCCAGAACCTTCAGCACCTTTCCATCGCAAACGTTGGTGTTTCAACGTTGGAGCAGTTTCCGCGGCTCCGGAATCTGCAAAAGCTGAACCTCTCCGACAACCGGATCGCTGGAGGGTTGGAGTTTCTTGTCCAGGCTGGCCTCGATTCGCTGCGTGACCTTGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCGCTGGCGCAGGTCAAGCTGGTTTCGCTGGATCTGTACGAGTGTCCCGTGACGCGTGTGAAGGATTATCGATCTAGGGTTTTTGGGTTGATTAAGTCGCTCAAGTACTTGGATAAGATGGATGCGGAGGAGAACGAGAGGCCTGAAAGTGATGATGAAGAAGAGGAGGAAGAGGAAGAGGAGGAGGAAGATGACCCTGGGAGTGGCGAGATTGACGGAGAAGAAGATCGACCTCATGGTATTAACAATGGACACAGCGAGGGCGTTGATGGTGTTGTTGATGCTGATGAGGAGGAAGAGAGTGATGCGGATGAGGAGGAGACGGAGACGTCGAGGCGGGTTACCAATGGCGATAATCACCGGGAGAATGGATTCCGTGTTGTGCCTGTAGAAGGGGATGACGTGGAGGAGGACGATGACGAGGATGATTCTGGTGAGGAAATTGATGAGGAGGAGGGCGATGATGATGATGTGGTTGAGGTTCATGAGATTGAGGATAGCGACGATGAGGATGGAGTGGAATATGATGAGGACGATGACGATGATGACGACGATGAGGAGGAGGTGGATAATGATGAGGGTGATTTTGCGGAGCCGGAGAGTACTGGGAGGTTAACGAGTACCGAGGGCGAGATTGATGGACATGAACAGGGGGAGGAGGATGGAGATGAGGATGATAATGGGGAGACCGGGGAAGATGAGATGGGGGTTGAAGACGATGGCGATTTTGAAGATGACGATGAAGAAGAAGACTATGGTGGTGGGTACCTTGTTCAGCCAGTTGGACAGTCTGATGCTCTGAATTCTGGAGTTGTTGCTGATGTGGATGGTGGAAATGATGAGGGTGAAGAGGAGGATGAAGTTGATGATGACGATGAAGATGTTCAGGTGTTACCTCCTGACTCATCACACCTGAAGAGGAAGAGGAATGATGAAGAGGAGGATGATGAGGAGAGTGATGATGAAGATGTGGTAGCATTCACTAAGTCATCGAAGAAGCATCATTGA


Promoter Sequence:
>Vu_05924::LG1:87956688-87958688(-)
TCATGCAAATTTGCGGGCGATTTATAAACCCCATGCTGTTCGTTTGTGAGAAAAAGGATGGATCACGACAGATTTGTGGAGATTTGCGGGATATACTCAATTTTGGTCACTCTCAATTTCGAAGAGATTTGTGTGGATTGTTTGGAAAAAGTCCTATGTGCCCTTACCGTATTACCTAAATTCTATAAGTGTACGTTGTTGAGAGCTATGGAGAGTGCCTTGCTGTTTTGCTGAGACGAGGAAGAGGAAGTGGTGAGGTAAGTAGAACCTATTGTCATGTATATGGTGGTTTGCATTTGCAGGTTTGTAGACTGGGAGGAAGAATGACGTTGTGCGTGTTGATGGCAAGAAAAATCAAAGGCTTGAAGAAGAAGATGAAACCGCGTGCGTCAGAGGCGAAGAAGACGATGAAGAGTGTTTAAATGGAGGGTTCGTAATTGATTACACCAGAGACGTAATCGGTCACGTCAATATGAAGAGTTTTCAAATGGTTCTGTAACCGGTTACGACAAACTGTAACCGGTCACGGCAAAGTATAACCGGTTACATTTTTGTGTATTTTAAAAATCTTTCTTATAATTGTTTTTTTCTAATATTAATATACTTGCATCTTTAAATTTAATATATTGTTAATACTACATTTTAAAATTAATTCATTTTACTAAATTATAATTTTAATAATATTTAAACAAAAATTTTATAAATTATACACCATTTTTTTCTCTTTATAAACATTTTTACAATTAAATATAACATTAATAAATAACATTTTATATTTATTTTATAAAGAGGGACATTTTGGTCATCCTTATTTCATACCAATTATACTAATTTTTAAAATCTATCACATCATCCAAACCCTACACTAATTTCACAAACTTTACTTCCAAATTCACTCTCAATTATCCACAAATCCACTCAAAAAAACAACTACAAACTTATCCTCAAATCCACTCAAATCCATTAAATCATCTCCCCCAAATCATCTCTCTCAAATACACCCAAAAGAACACACCTTCCTAATATCATAATCAATAGTTAGACTGAGATTAAATAGTTTTATTTAATAGTTAGATTGTTTTGGAAATCACAATTTTTATTCTTTATCCATTTGTATTTATTTTCATTACTGTATTTATATCTATTATAAATAAAAGAAATTACATTATAAGTCTCATTTTTTTTACTAGTACATAATCAAACCAATTTTAATATTTAAAAAGATTTAAAAAATAACGTCTTACAATTATAGTTTTTAATTATATTATAATTTATGATGTTTTTTAAAAGTAAAGTCCAAAACATTAGAAATAATTAAATTCAATTTAATATAAATATATAATTTAAATTAAATTAATTGATTAAGTAAGAAAATAAAATAAAAGATAATTATACATAAAGTTTTTTCTAAATACTGATTTAGAAAAAGAATGAAAATAAAATAATATGAAATAGAAAAAACTCTTAATTTTAAAATTCAAGAATAACGTAAATATATATACAAATAATGAATAAAATAAAAGAGTCACATGAGATAGGTTTTTAAAGTCAGTAATACTGCAAGCAGACACTAGAATTCGCCGTGAAAACTGTCCATTGCTTTTTATTGGAGAGCCAAAACCGAAGAGATGATAAGAGAGAAGAAATTTGATCCTTTTAAGGTACCCAATAGAAAAAAAAGAAAAGTAATATCTAAATATGAATTTCGGATATCTGATTCAGGCAGTTCACGCTCCGCGTGAGTGGCATTTCGGTAAATGTGGTGCCCAAAAGATCCAAATATGAAGCCTTTTTCCGATATTTACATAATCAATGACGTGTTTGAAAATTGCTAGTCCAACGCGCTACACCCTTCTCGAAAACAAACACAGAAACCCCCAATCTGAGCCGTCCAATGTTTCCACGTCATCGATCCCCGTCTCTCCAAATCCAACGGTGGGAATCGCTACAAGACAAAACGCCCCGAACCACAAAGGCTAAGCCCACCTGAACCCTAGGTC


Gene Sequence:
>Vu_05924(-)
AGACCCAAACCGCGAGCCCGTTTGCCCAGACACAATGAGAAAGAGGTTTATCCCCCCAATTCGCCTCCTCTCTTACCAATGAGAGAGAAATTATAAAACACAGACCTAGAGAGAGAAACACATACAAACCTAAACTCTCCAAAAACACCAAAACCAAAACCAAAACCATCACCGGGCTTCAATTTCCCACACTGCACAAACCATCCGGCGCTCTCTGCACTTCAATCCAATTTCATTCATCACCAATCTACGAGACAAACGCGCTTTTGGGGGTTCATAAAAGCACTCCAACTCTCACCCTTTTTCTTTTCTTTTCTATTCTACCCATGCTTTGCCAAGGTTGTGCCTGAAACGCTTGCGGTGTCGTTTTGTATGAGACATAGGATTTCCTATTTGATGGACGAGATCTGGGAGCGGGCTGTGGAGACCGCCTTAGACGGCGAGAAGGACCATGCGTCCGCCCGGACGCTAACCCTAGACGGCGCCGTTAAGTGCGTGCAGGGACGCTTACCTCCTCCGACCCTACTTGAAAGGTTCCAGAACCTTCAGCACCTTTCCATCGCAAACGTTGGTGTTTCAACGTTGGAGCAGTTTCCGCGGCTCCGGAATCTGCAAAAGCTGAACCTCTCCGACAACCGGATCGCTGGAGGGTTGGAGTTTCTTGTCCAGGCTGGCCTCGATTCGCTGCGTGACCTTGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCGCTGGCGCAGGTCAAGCTGGTTTCGCTGGATCTGTACGAGTGTCCCGTGACGCGTGTGAAGGATTATCGATCTAGGGTTTTTGGGTTGATTAAGTCGCTCAAGTACTTGGATAAGATGGATGCGGAGGAGAACGAGAGGCCTGAAAGTGATGATGAAGAAGAGGAGGAAGAGGAAGAGGAGGAGGAAGATGACCCTGGGAGTGGCGAGATTGACGGAGAAGAAGATCGACCTCATGGTATTAACAATGGACACAGCGAGGGCGTTGATGGTGTTGTTGATGCTGATGAGGAGGAAGAGAGTGATGCGGATGAGGAGGAGACGGAGACGTCGAGGCGGGTTACCAATGGCGATAATCACCGGGAGAATGGATTCCGTGTTGTGCCTGTAGAAGGGGATGACGTGGAGGAGGACGATGACGAGGATGATTCTGGTGAGGAAATTGATGAGGAGGAGGGCGATGATGATGATGTGGTTGAGGTTCATGAGATTGAGGATAGCGACGATGAGGATGGAGTGGAATATGATGAGGACGATGACGATGATGACGACGATGAGGAGGAGGTGGATAATGATGAGGGTGATTTTGCGGAGCCGGAGAGTACTGGGAGGTTAACGAGTACCGAGGGCGAGATTGATGGACATGAACAGGGGGAGGAGGATGGAGATGAGGATGATAATGGGGAGACCGGGGAAGATGAGATGGGGGTTGAAGACGATGGCGATTTTGAAGATGACGATGAAGTGAGATATCCCTTCTGATTTACTTTGATTTTGTTTAGTGCATGCTATAATTTGGTTTTAAACTTTTATTTGTTTCATTTTTTGGAATTTTTCTGCGTTTTTTTTTATATTTTGCTGTTTATTTCTTCTTCTTTTGATGTGGTCAGATTTCCAAGTTGGGGGTGGTCTCTATTTGCTGATGCTTGCTAACTGGATTCATTGTTGTCTGTTTGGTTTAATTTATTTACACTGTGATGTATATTTCCGTGCGTGGAGTTTGGGTTGATGTTTGTCTTGCATGTTTTGTACTTTAAAAATTAGATATTTTTTTATATTATCCTTAATAATTCGATGATCTTGGATATTTGTTTTTTTACATTTATTGCTTATTTTCAAGCATTTTGTCATTGCTGTATCTGTTTTACAAAATGCATGTTAGTGTTGCTTTGCTACAAACTTTATTGTTGATATTTGTCTGATTCCCACTGCCTTTTCCATGTTTATAGTTCACATCAAATGCAGGAATTGGAATGGAGTGGACTCTTGCAGATAAGGGAAACAGTGTAGTAGTATTAGTTGCAATTGAACTTTTGATTATTAATGACATTATTTTGATATTTTTAGATCTCTTGAAAGCTTCATAATTATTTATATATTTAAAATAACTTTCTGATATCTTAATACTTGAAATTCCTCTAAGTTATAGGTATATCTTTCTTATGTTTTAATTGATGTCATTGTCATAATAAAAAGCACGTATTTTACCGTCATTTTTAAGAATTTTTACCATTTTTATGTCTTTTTTTTTCGTCTAAAACATGAAAAGTGTGCTAATGCATCACTATAGGGTTTGGCACCACTAAGTCATACCAATCATTTACCACACCAGTGAATATTTTAAGCTTTTTTTTTTATTTGGGTTCTTTGCTCTTTTTCTTTTCATAAAATGCAACACTGGGTACGTGTTTTCCGTAAAGTAGTTTTTTTTCTGCCCATATAATTTTTTTTTTGTATTTAGGATTAGGATGTTCTATTGTTGGCACATGCTCAGCCTTTCCCAAGTCTGTGCTATGTCATACCGTGCTTCTGATCTGTTACTTGGTTTCTTTGGAAATTAAGATATTTAGATAATTTGGTTTGGGTGCATATTAGTATACTCTGGATGGTGAGAAGTCTAGAGTTTTCATCTTTTTAGTTTTCTGATTTTACCATGTTTCATTTCTTCTTGTCTAACCCGTGTGATAATTCATGAATTTTACAAATAATGTTTGAATGGCGAGCTCAGCCTTTCCCATGTAGTTATAAAACGTTCATTAAACATTGTAGTTATTTTGTTTGGCGGTGTTAATGTAAAATTTATGGACGTATGGGTAAGGGTGGTGAAAAATATTATTTGTTTTATTTACTGTATATTCCTGATTATTGTTGGAAGTATCTCAGTTTTTTAACCAGACTTTTAATGTTGTTGGAATCACAGGAAGAAGACTATGGTGGTGGGTACCTTGTTCAGCCAGTTGGACAGTCTGATGCTCTGAATTCTGGAGTTGTTGCTGATGTGGATGGTGGAAATGATGAGGGTGAAGAGGAGGATGAAGTTGATGATGACGATGAAGATGTTCAGGTGTTACCTCCTGACTCATCACACCTGAAGAGGAAGAGGAATGATGAAGAGGAGGATGATGAGGAGAGTGATGATGAAGATGTGGTAGCATTCACTAAGTCATCGAAGAAGCATCATTGAGCAACATCATTCTTAATATATAAAATGTTCTTGTTCTGTTGATGGCTTCCATGTGTGGGAAGCAGAGAAACCTCAGTTTTAGATAGAACAATGATTAGCTTTTAGGAGTTTAGCTGTGATGGACAGAGGACACATTAGGGAAAAGAATTGTATGTTGGGTGGAAATATGTTTAGTTCAAAAAGTCGTTAGTTTTTTTTCCCTCTTGCCTTTCACATATAGCCGTTACTTTATTAAATATTCAAATGGCAGTTATAAGAGGTTTACCGCTCATGTGCTCGATGCTGGTATTGGCTTGTAAAGGAACTGGCTGGTGCCTGGGGGAAAGGGTGGGAACTTTTTAAAATTTTTTCAAATCTCTAGTTTATTGGAGTACTTTTTTGGTGAGAGAAAAGGGAAGAACTTGTAAAAACCTGTAGATAGTTCTTATGAAAATGATTCTTATCTATCAAATTTGGTGACTTACTATTGTGTAATGACGTGTACACTTCACAAATTATTGCTGTTACGTGGATTTATTCCAGTTTTTGCTTGCATTT